RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 C8orf17Q9NRJ1 99 aa7.46□□□□□ -1.22
CTNNB1-201ENST00000349496 SPINK6Q6UWN8 80 aa7.45□□□□□ -1.22
CTNNB1-201ENST00000349496 CASC10Q5T4H9 136 aa7.45□□□□□ -1.22
CTNNB1-201ENST00000349496 KRTAP24-1Q3LI83 254 aa7.43□□□□□ -1.22
CTNNB1-201ENST00000349496 DMAC1Q96GE9 116 aa7.43□□□□□ -1.22
CTNNB1-201ENST00000349496 MRPL34Q9BQ48 92 aaKnown RBP7.43□□□□□ -1.22
CTNNB1-201ENST00000349496 CMYA5Q8N3K9 4069 aa7.42□□□□□ -1.22
CTNNB1-201ENST00000349496 K7EIL1 84 aa7.42□□□□□ -1.22
CTNNB1-201ENST00000349496 TLX1NBP0CAT3 122 aa7.41□□□□□ -1.22
CTNNB1-201ENST00000349496 IGLV9-49A0A0B4J1Y8 123 aa7.4□□□□□ -1.22
CTNNB1-201ENST00000349496 CHTF8P0CG12 524 aa7.4□□□□□ -1.22
CTNNB1-201ENST00000349496 LINC00472Q9H8W2 130 aa7.39□□□□□ -1.23
CTNNB1-201ENST00000349496 IGLV7-43P04211 117 aa7.38□□□□□ -1.23
CTNNB1-201ENST00000349496 NUPR2A6NF83 97 aa7.36□□□□□ -1.23
CTNNB1-201ENST00000349496 PRR34Q9NV39 138 aa7.36□□□□□ -1.23
CTNNB1-201ENST00000349496 C15orf56Q8N910 161 aa7.36□□□□□ -1.23
CTNNB1-201ENST00000349496 LINC00304Q8N9R0 145 aa7.34□□□□□ -1.23
CTNNB1-201ENST00000349496 A0A1B0GVX0 72 aa7.31□□□□□ -1.24
CTNNB1-201ENST00000349496 HUWE1Q7Z6Z7 4374 aaKnown RBP7.31□□□□□ -1.24
CTNNB1-201ENST00000349496 NOTCH2NLQ7Z3S9 236 aa7.31□□□□□ -1.24
CTNNB1-201ENST00000349496 DNAH7Q8WXX0 4024 aa7.31□□□□□ -1.24
CTNNB1-201ENST00000349496 KRTAP26-1Q6PEX3 210 aa7.3□□□□□ -1.24
CTNNB1-201ENST00000349496 IGKV2D-30A0A075B6S6 120 aa7.3□□□□□ -1.24
CTNNB1-201ENST00000349496 IGKV2-30P06310 120 aa7.3□□□□□ -1.24
CTNNB1-201ENST00000349496 TGP01266 2768 aa7.28□□□□□ -1.24
CTNNB1-201ENST00000349496 KRTAP4-16G5E9R7 235 aaPredicted RBP7.27□□□□□ -1.25
CTNNB1-201ENST00000349496 SPRR1AP35321 89 aa7.27□□□□□ -1.25
CTNNB1-201ENST00000349496 DNAH9Q9NYC9 4486 aa7.27□□□□□ -1.25
CTNNB1-201ENST00000349496 Q5W150 140 aa7.24□□□□□ -1.25
CTNNB1-201ENST00000349496 SEC61BP60468 96 aaKnown RBP7.23□□□□□ -1.25
CTNNB1-201ENST00000349496 PSORS1C2Q9UIG4 136 aa7.22□□□□□ -1.25
CTNNB1-201ENST00000349496 KRTAP7-1Q8IUC3 87 aa7.22□□□□□ -1.25
CTNNB1-201ENST00000349496 KRTAP1-5Q9BYS1 174 aa7.22□□□□□ -1.25
CTNNB1-201ENST00000349496 KRTAP11-1Q8IUC1 163 aa7.21□□□□□ -1.26
CTNNB1-201ENST00000349496 A0A1B0GU33 70 aa7.18□□□□□ -1.26
CTNNB1-201ENST00000349496 LY6G6CO95867 125 aa7.18□□□□□ -1.26
CTNNB1-201ENST00000349496 LINC01556Q5JQF7 62 aa7.18□□□□□ -1.26
CTNNB1-201ENST00000349496 PLA2G2DQ9UNK4 145 aa7.18□□□□□ -1.26
CTNNB1-201ENST00000349496 PLECQ15149 4684 aaKnown RBP7.16□□□□□ -1.26
CTNNB1-201ENST00000349496 DNAH3Q8TD57 4116 aa7.16□□□□□ -1.26
CTNNB1-201ENST00000349496 A0A087WTM6 91 aa7.15□□□□□ -1.27
CTNNB1-201ENST00000349496 FAM229AH3BQW9 127 aa7.14□□□□□ -1.27
CTNNB1-201ENST00000349496 Q96NJ1 140 aa7.13□□□□□ -1.27
CTNNB1-201ENST00000349496 DNAH1Q9P2D7 4330 aa7.12□□□□□ -1.27
CTNNB1-201ENST00000349496 C14orf177Q52M58 125 aa7.12□□□□□ -1.27
CTNNB1-201ENST00000349496 UBE2DNLQ8IWF7 75 aa7.1□□□□□ -1.27
CTNNB1-201ENST00000349496 Q8N1X5 172 aa7.1□□□□□ -1.27
CTNNB1-201ENST00000349496 PANO1I0J062 215 aa7.1□□□□□ -1.27
CTNNB1-201ENST00000349496 H0YAA0 97 aa7.1□□□□□ -1.27
CTNNB1-201ENST00000349496 DNHD1Q96M86 4753 aa7.09□□□□□ -1.27
CTNNB1-201ENST00000349496 MEGF8Q7Z7M0 2845 aa7.09□□□□□ -1.27
CTNNB1-201ENST00000349496 PRKDCP78527 4128 aaKnown RBP7.09□□□□□ -1.27
CTNNB1-201ENST00000349496 H3BNG1 76 aa7.09□□□□□ -1.28
CTNNB1-201ENST00000349496 CIRBP-AS1Q8TBR5 109 aa7.08□□□□□ -1.28
CTNNB1-201ENST00000349496 KMT2AQ03164 3969 aa7.08□□□□□ -1.28
CTNNB1-201ENST00000349496 STARD9Q9P2P6 4700 aa7.07□□□□□ -1.28
CTNNB1-201ENST00000349496 FRAS1Q86XX4 4008 aa7.07□□□□□ -1.28
CTNNB1-201ENST00000349496 Q6ZSA8 131 aa7.06□□□□□ -1.28
CTNNB1-201ENST00000349496 C10orf95Q9H7T3 257 aa7.05□□□□□ -1.28
CTNNB1-201ENST00000349496 FBN3Q75N90 2809 aa7.05□□□□□ -1.28
CTNNB1-201ENST00000349496 A0A0D9SG42 100 aa7.03□□□□□ -1.28
CTNNB1-201ENST00000349496 NBDYA0A0U1RRE5 68 aa7.02□□□□□ -1.29
CTNNB1-201ENST00000349496 ANAPC11Q9NYG5 84 aa7.02□□□□□ -1.29
CTNNB1-201ENST00000349496 APLNQ9ULZ1 77 aa6.99□□□□□ -1.29
CTNNB1-201ENST00000349496 SPRR1BP22528 89 aa6.97□□□□□ -1.29
CTNNB1-201ENST00000349496 H1FX-AS1Q4G0G2 97 aa6.97□□□□□ -1.29
CTNNB1-201ENST00000349496 KRTAP15-1Q3LI76 137 aa6.97□□□□□ -1.29
CTNNB1-201ENST00000349496 J3QL48 77 aa6.94□□□□□ -1.3
CTNNB1-201ENST00000349496 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.93□□□□□ -1.3
CTNNB1-201ENST00000349496 TYMSOSQ8TAI1 123 aa6.93□□□□□ -1.3
CTNNB1-201ENST00000349496 TPRXLQ17RH7 258 aa6.92□□□□□ -1.3
CTNNB1-201ENST00000349496 DNAH2Q9P225 4427 aa6.92□□□□□ -1.3
CTNNB1-201ENST00000349496 VPS13DQ5THJ4 4388 aa6.9□□□□□ -1.3
CTNNB1-201ENST00000349496 DNAH6Q9C0G6 4158 aa6.9□□□□□ -1.31
CTNNB1-201ENST00000349496 RPL37P61927 97 aaKnown RBP6.89□□□□□ -1.31
CTNNB1-201ENST00000349496 DNAH17Q9UFH2 4485 aa6.85□□□□□ -1.31
CTNNB1-201ENST00000349496 HECTD4Q9Y4D8 3996 aa6.84□□□□□ -1.31
CTNNB1-201ENST00000349496 KRTAP13-3Q3SY46 172 aa6.84□□□□□ -1.31
CTNNB1-201ENST00000349496 DNAH8Q96JB1 4490 aa6.84□□□□□ -1.31
CTNNB1-201ENST00000349496 DNAH11Q96DT5 4516 aa6.83□□□□□ -1.32
CTNNB1-201ENST00000349496 HYDINQ4G0P3 5121 aa6.8□□□□□ -1.32
CTNNB1-201ENST00000349496 Q6ZRN7 208 aaPredicted RBP6.78□□□□□ -1.32
CTNNB1-201ENST00000349496 COX6B2Q6YFQ2 88 aa6.76□□□□□ -1.33
CTNNB1-201ENST00000349496 DYNC2H1Q8NCM8 4307 aaKnown RBP6.73□□□□□ -1.33
CTNNB1-201ENST00000349496 LRP1BQ9NZR2 4599 aa6.73□□□□□ -1.33
CTNNB1-201ENST00000349496 WWC2-AS2Q96NR7 200 aa6.72□□□□□ -1.33
CTNNB1-201ENST00000349496 SPACA4Q8TDM5 124 aa6.72□□□□□ -1.33
CTNNB1-201ENST00000349496 KRTAP10-2P60368 255 aa6.69□□□□□ -1.34
CTNNB1-201ENST00000349496 CAMK2N1Q7Z7J9 78 aa6.69□□□□□ -1.34
CTNNB1-201ENST00000349496 FAT2Q9NYQ8 4349 aa6.67□□□□□ -1.34
CTNNB1-201ENST00000349496 DNAH5Q8TE73 4624 aa6.66□□□□□ -1.34
CTNNB1-201ENST00000349496 KRTAP13-1Q8IUC0 172 aa6.66□□□□□ -1.34
CTNNB1-201ENST00000349496 PKHD1P08F94 4074 aa6.64□□□□□ -1.35
CTNNB1-201ENST00000349496 ALMS1Q8TCU4 4167 aa6.64□□□□□ -1.35
CTNNB1-201ENST00000349496 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
CTNNB1-201ENST00000349496 VPS13BQ7Z7G8 4022 aa6.58□□□□□ -1.36
CTNNB1-201ENST00000349496 FAT1Q14517 4588 aa6.56□□□□□ -1.36
CTNNB1-201ENST00000349496 KRTAP10-1P60331 282 aa6.54□□□□□ -1.36
CTNNB1-201ENST00000349496 SMR3BP02814 79 aaPredicted RBP6.52□□□□□ -1.37
CTNNB1-201ENST00000349496 S4R3F8 94 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms