RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 LINC01554Q52M75 96 aa8.48□□□□□ -1.05
RLIM-202ENST00000349225 NBEAL1Q6ZS30 2694 aa8.46□□□□□ -1.05
RLIM-202ENST00000349225 DNAH8Q96JB1 4490 aa8.42□□□□□ -1.06
RLIM-202ENST00000349225 SPATA8Q6RVD6 105 aa8.41□□□□□ -1.06
RLIM-202ENST00000349225 H3BS24 57 aa8.41□□□□□ -1.06
RLIM-202ENST00000349225 ANAPC11Q9NYG5 84 aa8.41□□□□□ -1.06
RLIM-202ENST00000349225 STAB1Q9NY15 2570 aa8.4□□□□□ -1.06
RLIM-202ENST00000349225 ACYP2P14621 99 aa8.39□□□□□ -1.07
RLIM-202ENST00000349225 DYNC2H1Q8NCM8 4307 aaKnown RBP8.39□□□□□ -1.07
RLIM-202ENST00000349225 WWC2-AS2Q96NR7 200 aa8.38□□□□□ -1.07
RLIM-202ENST00000349225 DMAC1Q96GE9 116 aa8.37□□□□□ -1.07
RLIM-202ENST00000349225 LINC00483Q53H64 154 aa8.37□□□□□ -1.07
RLIM-202ENST00000349225 A0A1B0GU69 56 aa8.36□□□□□ -1.07
RLIM-202ENST00000349225 CDK2AP2O75956 126 aa8.35□□□□□ -1.07
RLIM-202ENST00000349225 CSAG1Q6PB30 78 aa8.33□□□□□ -1.08
RLIM-202ENST00000349225 SPINK6Q6UWN8 80 aa8.32□□□□□ -1.08
RLIM-202ENST00000349225 MIR22HGQ0VDD5 57 aa8.31□□□□□ -1.08
RLIM-202ENST00000349225 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.31□□□□□ -1.08
RLIM-202ENST00000349225 HECTD4Q9Y4D8 3996 aa8.3□□□□□ -1.08
RLIM-202ENST00000349225 STAB2Q8WWQ8 2551 aa8.3□□□□□ -1.08
RLIM-202ENST00000349225 RETNLBQ9BQ08 111 aa8.28□□□□□ -1.08
RLIM-202ENST00000349225 MEGF8Q7Z7M0 2845 aa8.26□□□□□ -1.09
RLIM-202ENST00000349225 UQCR11O14957 56 aa8.26□□□□□ -1.09
RLIM-202ENST00000349225 DNAH17Q9UFH2 4485 aa8.24□□□□□ -1.09
RLIM-202ENST00000349225 SPACA4Q8TDM5 124 aa8.23□□□□□ -1.09
RLIM-202ENST00000349225 PLECQ15149 4684 aaKnown RBP8.23□□□□□ -1.09
RLIM-202ENST00000349225 C14orf177Q52M58 125 aa8.23□□□□□ -1.09
RLIM-202ENST00000349225 ZNF861PO60384 105 aa8.22□□□□□ -1.09
RLIM-202ENST00000349225 VPS13DQ5THJ4 4388 aa8.21□□□□□ -1.1
RLIM-202ENST00000349225 PSORS1C2Q9UIG4 136 aa8.21□□□□□ -1.1
RLIM-202ENST00000349225 IGKV2-30P06310 120 aa8.19□□□□□ -1.1
RLIM-202ENST00000349225 KRTAP24-1Q3LI83 254 aa8.19□□□□□ -1.1
RLIM-202ENST00000349225 Q6ZRN7 208 aaPredicted RBP8.17□□□□□ -1.1
RLIM-202ENST00000349225 IGLV5-52A0A0A0MRZ9 124 aa8.16□□□□□ -1.1
RLIM-202ENST00000349225 UBE2DNLQ8IWF7 75 aa8.16□□□□□ -1.1
RLIM-202ENST00000349225 ZNF706Q9Y5V0 76 aaPredicted RBP8.16□□□□□ -1.1
RLIM-202ENST00000349225 APLNQ9ULZ1 77 aa8.15□□□□□ -1.11
RLIM-202ENST00000349225 CIRBP-AS1Q8TBR5 109 aa8.14□□□□□ -1.11
RLIM-202ENST00000349225 FAM229AH3BQW9 127 aa8.12□□□□□ -1.11
RLIM-202ENST00000349225 IGLV7-43P04211 117 aa8.12□□□□□ -1.11
RLIM-202ENST00000349225 FBN3Q75N90 2809 aa8.11□□□□□ -1.11
RLIM-202ENST00000349225 KMT2AQ03164 3969 aa8.11□□□□□ -1.11
RLIM-202ENST00000349225 TGP01266 2768 aa8.09□□□□□ -1.11
RLIM-202ENST00000349225 PRKDCP78527 4128 aaKnown RBP8.09□□□□□ -1.11
RLIM-202ENST00000349225 KRTAP16-1A8MUX0 517 aa8.09□□□□□ -1.11
RLIM-202ENST00000349225 DNAH2Q9P225 4427 aa8.07□□□□□ -1.12
RLIM-202ENST00000349225 NBDYA0A0U1RRE5 68 aa8.06□□□□□ -1.12
RLIM-202ENST00000349225 C1orf134Q5TEV5 83 aa8.06□□□□□ -1.12
RLIM-202ENST00000349225 IGKV2D-30A0A075B6S6 120 aa8.05□□□□□ -1.12
RLIM-202ENST00000349225 STARD9Q9P2P6 4700 aa8.04□□□□□ -1.12
RLIM-202ENST00000349225 DNAH6Q9C0G6 4158 aa8.03□□□□□ -1.12
RLIM-202ENST00000349225 H0YAA0 97 aa8.03□□□□□ -1.12
RLIM-202ENST00000349225 A8MUU9 505 aa8.03□□□□□ -1.12
RLIM-202ENST00000349225 SPINK1P00995 79 aa8.02□□□□□ -1.13
RLIM-202ENST00000349225 MGAM2Q2M2H8 2515 aa8.02□□□□□ -1.13
RLIM-202ENST00000349225 Q6ZSA8 131 aa8.01□□□□□ -1.13
RLIM-202ENST00000349225 KRTAP25-1Q3LHN0 102 aa8□□□□□ -1.13
RLIM-202ENST00000349225 LINC00304Q8N9R0 145 aa7.99□□□□□ -1.13
RLIM-202ENST00000349225 DNAH11Q96DT5 4516 aa7.99□□□□□ -1.13
RLIM-202ENST00000349225 A0A087WTM6 91 aa7.98□□□□□ -1.13
RLIM-202ENST00000349225 ROMO1P60602 79 aa7.98□□□□□ -1.13
RLIM-202ENST00000349225 Q8N1X5 172 aa7.96□□□□□ -1.13
RLIM-202ENST00000349225 FLG2Q5D862 2391 aaPredicted RBP7.96□□□□□ -1.13
RLIM-202ENST00000349225 TYMSOSQ8TAI1 123 aa7.94□□□□□ -1.14
RLIM-202ENST00000349225 KRTAP13-2Q52LG2 175 aa7.94□□□□□ -1.14
RLIM-202ENST00000349225 SSBP3-AS1Q7Z2R9 100 aa7.94□□□□□ -1.14
RLIM-202ENST00000349225 LY6G6CO95867 125 aa7.91□□□□□ -1.14
RLIM-202ENST00000349225 DNHD1Q96M86 4753 aa7.89□□□□□ -1.15
RLIM-202ENST00000349225 CRIPTQ9P021 101 aa7.89□□□□□ -1.15
RLIM-202ENST00000349225 P0C880 135 aa7.87□□□□□ -1.15
RLIM-202ENST00000349225 DNAH5Q8TE73 4624 aa7.86□□□□□ -1.15
RLIM-202ENST00000349225 LRP1BQ9NZR2 4599 aa7.83□□□□□ -1.16
RLIM-202ENST00000349225 KRTAP21-3Q3LHN1 58 aa7.8□□□□□ -1.16
RLIM-202ENST00000349225 A0A1B0GU33 70 aa7.79□□□□□ -1.16
RLIM-202ENST00000349225 VPS13BQ7Z7G8 4022 aa7.78□□□□□ -1.16
RLIM-202ENST00000349225 KRTAP3-1Q9BYR8 98 aa7.78□□□□□ -1.16
RLIM-202ENST00000349225 H1FX-AS1Q4G0G2 97 aa7.76□□□□□ -1.17
RLIM-202ENST00000349225 KRTAP1-4P0C5Y4 121 aa7.73□□□□□ -1.17
RLIM-202ENST00000349225 FAT2Q9NYQ8 4349 aa7.72□□□□□ -1.17
RLIM-202ENST00000349225 NUPR2A6NF83 97 aa7.72□□□□□ -1.17
RLIM-202ENST00000349225 PKD1P98161 4303 aa7.66□□□□□ -1.18
RLIM-202ENST00000349225 KRTAP10-2P60368 255 aa7.66□□□□□ -1.18
RLIM-202ENST00000349225 COX6B2Q6YFQ2 88 aa7.64□□□□□ -1.19
RLIM-202ENST00000349225 TPRXLQ17RH7 258 aa7.61□□□□□ -1.19
RLIM-202ENST00000349225 KRTAP13-4Q3LI77 160 aa7.54□□□□□ -1.2
RLIM-202ENST00000349225 KRTAP10-1P60331 282 aa7.53□□□□□ -1.2
RLIM-202ENST00000349225 C9orf92A6NGG3 77 aa7.53□□□□□ -1.2
RLIM-202ENST00000349225 C10orf95Q9H7T3 257 aa7.52□□□□□ -1.21
RLIM-202ENST00000349225 HYDINQ4G0P3 5121 aa7.52□□□□□ -1.21
RLIM-202ENST00000349225 K7ERS5 55 aa7.51□□□□□ -1.21
RLIM-202ENST00000349225 KRTAP10-6P60371 365 aaPredicted RBP7.48□□□□□ -1.21
RLIM-202ENST00000349225 SPINT4Q6UDR6 99 aa7.48□□□□□ -1.21
RLIM-202ENST00000349225 C20orf166-AS1Q96NR2 134 aa7.48□□□□□ -1.21
RLIM-202ENST00000349225 DMBT1Q9UGM3 2413 aaPredicted RBP7.48□□□□□ -1.21
RLIM-202ENST00000349225 KRTAP15-1Q3LI76 137 aa7.47□□□□□ -1.21
RLIM-202ENST00000349225 NDUFAF8A1L188 74 aa7.46□□□□□ -1.22
RLIM-202ENST00000349225 PKHD1P08F94 4074 aa7.45□□□□□ -1.22
RLIM-202ENST00000349225 RPL37P61927 97 aaKnown RBP7.44□□□□□ -1.22
RLIM-202ENST00000349225 A0A0D9SG42 100 aa7.44□□□□□ -1.22
RLIM-202ENST00000349225 SACSQ9NZJ4 4579 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms