RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 P0C880 135 aa6.23□□□□□ -1.41
SMARCE1-202ENST00000348513 STAB2Q8WWQ8 2551 aa6.23□□□□□ -1.41
SMARCE1-202ENST00000348513 CFAP47Q6ZTR5 3102 aa6.23□□□□□ -1.41
SMARCE1-202ENST00000348513 DMBT1Q9UGM3 2413 aaPredicted RBP6.22□□□□□ -1.41
SMARCE1-202ENST00000348513 CRYBG3Q68DQ2 2970 aa6.22□□□□□ -1.41
SMARCE1-202ENST00000348513 NSD1Q96L73 2696 aaPredicted RBP6.21□□□□□ -1.42
SMARCE1-202ENST00000348513 H0YAA0 97 aa6.2□□□□□ -1.42
SMARCE1-202ENST00000348513 ADGRG4Q8IZF6 3080 aa6.19□□□□□ -1.42
SMARCE1-202ENST00000348513 UTP20O75691 2785 aaKnown RBP6.18□□□□□ -1.42
SMARCE1-202ENST00000348513 FLNCQ14315 2725 aa6.18□□□□□ -1.42
SMARCE1-202ENST00000348513 KRTAP13-2Q52LG2 175 aa6.18□□□□□ -1.42
SMARCE1-202ENST00000348513 SPTBN5Q9NRC6 3674 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-202ENST00000348513 NBEAQ8NFP9 2946 aa6.16□□□□□ -1.42
SMARCE1-202ENST00000348513 ASH1LQ9NR48 2969 aaKnown RBP6.15□□□□□ -1.42
SMARCE1-202ENST00000348513 HIVEP1P15822 2718 aa6.14□□□□□ -1.43
SMARCE1-202ENST00000348513 SPEGQ15772 3267 aa6.12□□□□□ -1.43
SMARCE1-202ENST00000348513 PP632Q6XCG6 107 aa6.09□□□□□ -1.43
SMARCE1-202ENST00000348513 APCP25054 2843 aa6.09□□□□□ -1.43
SMARCE1-202ENST00000348513 KRTAP13-1Q8IUC0 172 aa6.09□□□□□ -1.43
SMARCE1-202ENST00000348513 EYSQ5T1H1 3165 aa6.09□□□□□ -1.43
SMARCE1-202ENST00000348513 USP34Q70CQ2 3546 aa6.08□□□□□ -1.44
SMARCE1-202ENST00000348513 RPS29P62273 56 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-202ENST00000348513 ZZEF1O43149 2961 aa6.06□□□□□ -1.44
SMARCE1-202ENST00000348513 TNRC18O15417 2968 aaPredicted RBP6.03□□□□□ -1.44
SMARCE1-202ENST00000348513 KMT2BQ9UMN6 2715 aaPredicted RBP6.02□□□□□ -1.45
SMARCE1-202ENST00000348513 CELSR2Q9HCU4 2923 aa6.01□□□□□ -1.45
SMARCE1-202ENST00000348513 TENM4Q6N022 2769 aa6.01□□□□□ -1.45
SMARCE1-202ENST00000348513 DMXL1Q9Y485 3027 aa6□□□□□ -1.45
SMARCE1-202ENST00000348513 KRTAP21-3Q3LHN1 58 aa5.96□□□□□ -1.45
SMARCE1-202ENST00000348513 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
SMARCE1-202ENST00000348513 DCHS2Q6V1P9 2916 aa5.94□□□□□ -1.46
SMARCE1-202ENST00000348513 MYO15AQ9UKN7 3530 aa5.92□□□□□ -1.46
SMARCE1-202ENST00000348513 TPRXLQ17RH7 258 aa5.91□□□□□ -1.46
SMARCE1-202ENST00000348513 ZANQ9Y493 2812 aa5.9□□□□□ -1.46
SMARCE1-202ENST00000348513 LOC400499M0QZD8 3231 aa5.89□□□□□ -1.47
SMARCE1-202ENST00000348513 NIPBLQ6KC79 2804 aaeCLIP5.89□□□□□ -1.47
SMARCE1-202ENST00000348513 A0A1B0GVY2 172 aa5.89□□□□□ -1.47
SMARCE1-202ENST00000348513 KRTAP10-8P60410 259 aa5.88□□□□□ -1.47
SMARCE1-202ENST00000348513 TNP1P09430 55 aa5.86□□□□□ -1.47
SMARCE1-202ENST00000348513 KRTAP1-4P0C5Y4 121 aa5.86□□□□□ -1.47
SMARCE1-202ENST00000348513 HRNRQ86YZ3 2850 aaPredicted RBP5.84□□□□□ -1.47
SMARCE1-202ENST00000348513 XP32Q5T750 250 aa5.84□□□□□ -1.47
SMARCE1-202ENST00000348513 FBN2P35556 2912 aa5.8□□□□□ -1.48
SMARCE1-202ENST00000348513 INE1O15225 51 aa5.78□□□□□ -1.48
SMARCE1-202ENST00000348513 NF1P21359 2839 aa5.78□□□□□ -1.48
SMARCE1-202ENST00000348513 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
SMARCE1-202ENST00000348513 WDFY3Q8IZQ1 3526 aa5.74□□□□□ -1.49
SMARCE1-202ENST00000348513 RELNP78509 3460 aa5.74□□□□□ -1.49
SMARCE1-202ENST00000348513 ASPMQ8IZT6 3477 aa5.72□□□□□ -1.49
SMARCE1-202ENST00000348513 TENM1Q9UKZ4 2725 aa5.72□□□□□ -1.49
SMARCE1-202ENST00000348513 TENM2Q9NT68 2774 aa5.71□□□□□ -1.49
SMARCE1-202ENST00000348513 KRTAP13-3Q3SY46 172 aa5.71□□□□□ -1.5
SMARCE1-202ENST00000348513 CELSR1Q9NYQ6 3014 aa5.69□□□□□ -1.5
SMARCE1-202ENST00000348513 KRTAP10-10P60014 251 aa5.67□□□□□ -1.5
SMARCE1-202ENST00000348513 KRTAP12-2P59991 146 aa5.65□□□□□ -1.51
SMARCE1-202ENST00000348513 DCHS1Q96JQ0 3298 aa5.63□□□□□ -1.51
SMARCE1-202ENST00000348513 TENM3Q9P273 2699 aa5.63□□□□□ -1.51
SMARCE1-202ENST00000348513 ZFHX4Q86UP3 3567 aa5.62□□□□□ -1.51
SMARCE1-202ENST00000348513 LAMA5O15230 3695 aa5.61□□□□□ -1.51
SMARCE1-202ENST00000348513 NBPF19A0A087WUL8 3843 aa5.61□□□□□ -1.51
SMARCE1-202ENST00000348513 PKD1L1Q8TDX9 2849 aa5.59□□□□□ -1.51
SMARCE1-202ENST00000348513 MXRA5Q9NR99 2828 aa5.56□□□□□ -1.52
SMARCE1-202ENST00000348513 VWFP04275 2813 aa5.53□□□□□ -1.52
SMARCE1-202ENST00000348513 TGP01266 2768 aa5.5□□□□□ -1.53
SMARCE1-202ENST00000348513 CSMD1Q96PZ7 3565 aa5.5□□□□□ -1.53
SMARCE1-202ENST00000348513 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
SMARCE1-202ENST00000348513 KRTAP12-1P59990 96 aa5.49□□□□□ -1.53
SMARCE1-202ENST00000348513 KRTAP13-4Q3LI77 160 aa5.49□□□□□ -1.53
SMARCE1-202ENST00000348513 DMDP11532 3685 aa5.48□□□□□ -1.53
SMARCE1-202ENST00000348513 PDZD2O15018 2839 aa5.41□□□□□ -1.54
SMARCE1-202ENST00000348513 ZFHX3Q15911 3703 aa5.41□□□□□ -1.54
SMARCE1-202ENST00000348513 SMG1Q96Q15 3661 aaKnown RBP5.4□□□□□ -1.55
SMARCE1-202ENST00000348513 FBN1P35555 2871 aaKnown RBP5.36□□□□□ -1.55
SMARCE1-202ENST00000348513 SVEP1Q4LDE5 3571 aa5.31□□□□□ -1.56
SMARCE1-202ENST00000348513 MUC3AQ02505 3323 aa5.3□□□□□ -1.56
SMARCE1-202ENST00000348513 ANK3Q12955 4377 aaKnown RBP5.3□□□□□ -1.56
SMARCE1-202ENST00000348513 OTOGQ6ZRI0 2925 aa5.3□□□□□ -1.56
SMARCE1-202ENST00000348513 CSMD2Q7Z408 3487 aa5.29□□□□□ -1.56
SMARCE1-202ENST00000348513 KRTAP3-1Q9BYR8 98 aa5.25□□□□□ -1.57
SMARCE1-202ENST00000348513 CUBNO60494 3623 aa5.25□□□□□ -1.57
SMARCE1-202ENST00000348513 KRTAP10-6P60371 365 aaPredicted RBP5.24□□□□□ -1.57
SMARCE1-202ENST00000348513 SRRM2Q9UQ35 2752 aaKnown RBP5.22□□□□□ -1.57
SMARCE1-202ENST00000348513 SPENQ96T58 3664 aaKnown RBP5.21□□□□□ -1.58
SMARCE1-202ENST00000348513 TRRAPQ9Y4A5 3859 aa5.16□□□□□ -1.58
SMARCE1-202ENST00000348513 FBN3Q75N90 2809 aa5.14□□□□□ -1.59
SMARCE1-202ENST00000348513 MEGF8Q7Z7M0 2845 aa5.07□□□□□ -1.6
SMARCE1-202ENST00000348513 MT1HL1P0DM35 61 aa5.06□□□□□ -1.6
SMARCE1-202ENST00000348513 KRTAP4-5Q9BYR2 181 aa5.05□□□□□ -1.6
SMARCE1-202ENST00000348513 COL7A1Q02388 2944 aa5.04□□□□□ -1.6
SMARCE1-202ENST00000348513 BSNQ9UPA5 3926 aa5.04□□□□□ -1.6
SMARCE1-202ENST00000348513 KRTAP3-2Q9BYR7 98 aa5.03□□□□□ -1.6
SMARCE1-202ENST00000348513 HUWE1Q7Z6Z7 4374 aaKnown RBP5.03□□□□□ -1.6
SMARCE1-202ENST00000348513 VPS13CQ709C8 3753 aa4.96□□□□□ -1.62
SMARCE1-202ENST00000348513 ALMS1Q8TCU4 4167 aa4.94□□□□□ -1.62
SMARCE1-202ENST00000348513 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
SMARCE1-202ENST00000348513 KRTAP3-3Q9BYR6 98 aa4.89□□□□□ -1.63
SMARCE1-202ENST00000348513 KRTAP10-4P60372 401 aaPredicted RBP4.89□□□□□ -1.63
SMARCE1-202ENST00000348513 CSMD3Q7Z407 3707 aa4.83□□□□□ -1.64
SMARCE1-202ENST00000348513 KRTAP10-12P60413 245 aa4.83□□□□□ -1.64
SMARCE1-202ENST00000348513 DNAH9Q9NYC9 4486 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms