RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 FP248Q71RG6 208 aaPredicted RBP7.83□□□□□ -1.16
CASC4-202ENST00000345795 CMYA5Q8N3K9 4069 aa7.82□□□□□ -1.16
CASC4-202ENST00000345795 KRTAP13-1Q8IUC0 172 aa7.82□□□□□ -1.16
CASC4-202ENST00000345795 Q8N1X5 172 aa7.81□□□□□ -1.16
CASC4-202ENST00000345795 COA5Q86WW8 74 aa7.81□□□□□ -1.16
CASC4-202ENST00000345795 LINC00304Q8N9R0 145 aa7.81□□□□□ -1.16
CASC4-202ENST00000345795 SSBP3-AS1Q7Z2R9 100 aa7.8□□□□□ -1.16
CASC4-202ENST00000345795 LIMD2Q9BT23 127 aa7.78□□□□□ -1.16
CASC4-202ENST00000345795 Q5XG85 94 aa7.78□□□□□ -1.16
CASC4-202ENST00000345795 CD164Q04900 197 aa7.77□□□□□ -1.17
CASC4-202ENST00000345795 Q5W150 140 aa7.77□□□□□ -1.17
CASC4-202ENST00000345795 C7orf65Q6ZTY9 151 aa7.77□□□□□ -1.17
CASC4-202ENST00000345795 KRTAP13-2Q52LG2 175 aa7.76□□□□□ -1.17
CASC4-202ENST00000345795 TP53AIP1Q9HCN2 124 aa7.76□□□□□ -1.17
CASC4-202ENST00000345795 DNAH11Q96DT5 4516 aa7.75□□□□□ -1.17
CASC4-202ENST00000345795 KRTAP29-1A8MX34 341 aaPredicted RBP7.74□□□□□ -1.17
CASC4-202ENST00000345795 C1orf195Q5TG92 126 aa7.74□□□□□ -1.17
CASC4-202ENST00000345795 FAM229AH3BQW9 127 aa7.72□□□□□ -1.17
CASC4-202ENST00000345795 LINC00483Q53H64 154 aa7.7□□□□□ -1.18
CASC4-202ENST00000345795 DNAH1Q9P2D7 4330 aa7.7□□□□□ -1.18
CASC4-202ENST00000345795 FRAS1Q86XX4 4008 aa7.68□□□□□ -1.18
CASC4-202ENST00000345795 PMAIP1Q13794 54 aa7.66□□□□□ -1.18
CASC4-202ENST00000345795 LCE6AA0A183 80 aa7.66□□□□□ -1.18
CASC4-202ENST00000345795 HRES1P13985 223 aa7.66□□□□□ -1.18
CASC4-202ENST00000345795 A8MU10 97 aa7.65□□□□□ -1.18
CASC4-202ENST00000345795 LOC101927531A0A1B0GV80 90 aa7.63□□□□□ -1.19
CASC4-202ENST00000345795 DNAH8Q96JB1 4490 aa7.61□□□□□ -1.19
CASC4-202ENST00000345795 ACYP2P14621 99 aa7.61□□□□□ -1.19
CASC4-202ENST00000345795 ZCCHC13Q8WW36 166 aaKnown RBP7.6□□□□□ -1.19
CASC4-202ENST00000345795 FAT1Q14517 4588 aa7.6□□□□□ -1.19
CASC4-202ENST00000345795 C8orf87E5RJ46 101 aa7.6□□□□□ -1.19
CASC4-202ENST00000345795 H3BPC8 53 aa7.6□□□□□ -1.19
CASC4-202ENST00000345795 DNAH6Q9C0G6 4158 aa7.6□□□□□ -1.19
CASC4-202ENST00000345795 CYP4F30PQ9H0H9 118 aa7.59□□□□□ -1.19
CASC4-202ENST00000345795 VPS13DQ5THJ4 4388 aa7.58□□□□□ -1.2
CASC4-202ENST00000345795 PRO0628Q9UI54 55 aa7.58□□□□□ -1.2
CASC4-202ENST00000345795 A0A1B0GU69 56 aa7.57□□□□□ -1.2
CASC4-202ENST00000345795 V9GYY9 64 aa7.57□□□□□ -1.2
CASC4-202ENST00000345795 SEC61GP60059 68 aa7.57□□□□□ -1.2
CASC4-202ENST00000345795 Q5VSD8 79 aa7.56□□□□□ -1.2
CASC4-202ENST00000345795 DNAH3Q8TD57 4116 aa7.56□□□□□ -1.2
CASC4-202ENST00000345795 IGLV7-46A0A075B6I9 117 aa7.55□□□□□ -1.2
CASC4-202ENST00000345795 KRTAP1-4P0C5Y4 121 aa7.55□□□□□ -1.2
CASC4-202ENST00000345795 LRP1BQ9NZR2 4599 aa7.54□□□□□ -1.2
CASC4-202ENST00000345795 HYDINQ4G0P3 5121 aa7.53□□□□□ -1.2
CASC4-202ENST00000345795 Q6ZSA8 131 aa7.5□□□□□ -1.21
CASC4-202ENST00000345795 DNAH2Q9P225 4427 aa7.5□□□□□ -1.21
CASC4-202ENST00000345795 DNAH5Q8TE73 4624 aa7.5□□□□□ -1.21
CASC4-202ENST00000345795 ATP11AUNQ6ZP68 121 aa7.49□□□□□ -1.21
CASC4-202ENST00000345795 SPANXA2-OT1Q8N9U9 137 aa7.48□□□□□ -1.21
CASC4-202ENST00000345795 SPINK7P58062 85 aa7.46□□□□□ -1.21
CASC4-202ENST00000345795 DNAH17Q9UFH2 4485 aa7.46□□□□□ -1.22
CASC4-202ENST00000345795 Q5VV11 94 aa7.45□□□□□ -1.22
CASC4-202ENST00000345795 PKHD1P08F94 4074 aa7.44□□□□□ -1.22
CASC4-202ENST00000345795 MYCBP2O75592 4640 aa7.43□□□□□ -1.22
CASC4-202ENST00000345795 Q1T7F1 81 aa7.41□□□□□ -1.22
CASC4-202ENST00000345795 J3QL48 77 aa7.39□□□□□ -1.23
CASC4-202ENST00000345795 A0A0D9SG42 100 aa7.36□□□□□ -1.23
CASC4-202ENST00000345795 KMT2CQ8NEZ4 4911 aaKnown RBP7.35□□□□□ -1.23
CASC4-202ENST00000345795 HECTD4Q9Y4D8 3996 aa7.33□□□□□ -1.24
CASC4-202ENST00000345795 VPS13BQ7Z7G8 4022 aa7.32□□□□□ -1.24
CASC4-202ENST00000345795 FAT3Q8TDW7 4589 aa7.31□□□□□ -1.24
CASC4-202ENST00000345795 LCA10Q71F78 164 aa7.3□□□□□ -1.24
CASC4-202ENST00000345795 KIAA1109Q2LD37 5005 aa7.29□□□□□ -1.24
CASC4-202ENST00000345795 MIR22HGQ0VDD5 57 aa7.28□□□□□ -1.24
CASC4-202ENST00000345795 DYNC1H1Q14204 4646 aaKnown RBP7.28□□□□□ -1.24
CASC4-202ENST00000345795 LINC01554Q52M75 96 aa7.26□□□□□ -1.25
CASC4-202ENST00000345795 DMAC1Q96GE9 116 aa7.26□□□□□ -1.25
CASC4-202ENST00000345795 CRIPTQ9P021 101 aa7.26□□□□□ -1.25
CASC4-202ENST00000345795 DYNC2H1Q8NCM8 4307 aaKnown RBP7.26□□□□□ -1.25
CASC4-202ENST00000345795 LRP1Q07954 4544 aaKnown RBP7.26□□□□□ -1.25
CASC4-202ENST00000345795 UQCR11O14957 56 aa7.26□□□□□ -1.25
CASC4-202ENST00000345795 ASB16-AS1Q495Z4 193 aa7.25□□□□□ -1.25
CASC4-202ENST00000345795 PRAC1Q96KF2 57 aa7.25□□□□□ -1.25
CASC4-202ENST00000345795 KRTAP21-3Q3LHN1 58 aa7.25□□□□□ -1.25
CASC4-202ENST00000345795 LINC01558Q9Y6Z2 57 aa7.24□□□□□ -1.25
CASC4-202ENST00000345795 KRTAP16-1A8MUX0 517 aa7.23□□□□□ -1.25
CASC4-202ENST00000345795 A0A1B0GVY2 172 aa7.22□□□□□ -1.25
CASC4-202ENST00000345795 SPATA8Q6RVD6 105 aa7.22□□□□□ -1.25
CASC4-202ENST00000345795 Q75L30 129 aa7.21□□□□□ -1.26
CASC4-202ENST00000345795 CDC42SE1Q9NRR8 79 aa7.18□□□□□ -1.26
CASC4-202ENST00000345795 FAT2Q9NYQ8 4349 aa7.18□□□□□ -1.26
CASC4-202ENST00000345795 SACSQ9NZJ4 4579 aa7.16□□□□□ -1.26
CASC4-202ENST00000345795 RYR1P21817 5038 aa7.15□□□□□ -1.26
CASC4-202ENST00000345795 APOBP04114 4563 aaKnown RBP7.14□□□□□ -1.27
CASC4-202ENST00000345795 COX6B2Q6YFQ2 88 aa7.13□□□□□ -1.27
CASC4-202ENST00000345795 KRTAP13-3Q3SY46 172 aa7.13□□□□□ -1.27
CASC4-202ENST00000345795 ADM2Q7Z4H4 148 aa7.13□□□□□ -1.27
CASC4-202ENST00000345795 K7ERS5 55 aa7.12□□□□□ -1.27
CASC4-202ENST00000345795 RYR3Q15413 4870 aa7.12□□□□□ -1.27
CASC4-202ENST00000345795 A0A1B0GU33 70 aa7.11□□□□□ -1.27
CASC4-202ENST00000345795 SPINT4Q6UDR6 99 aa7.1□□□□□ -1.27
CASC4-202ENST00000345795 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
CASC4-202ENST00000345795 A8MUU9 505 aa7.04□□□□□ -1.28
CASC4-202ENST00000345795 XP32Q5T750 250 aa7.03□□□□□ -1.28
CASC4-202ENST00000345795 ALMS1Q8TCU4 4167 aa7.03□□□□□ -1.28
CASC4-202ENST00000345795 C20orf166-AS1Q96NR2 134 aa7.02□□□□□ -1.29
CASC4-202ENST00000345795 S4R3F8 94 aa7.01□□□□□ -1.29
CASC4-202ENST00000345795 KTN1-AS1Q86SY8 53 aa7.01□□□□□ -1.29
CASC4-202ENST00000345795 RBM12B-AS1Q9P1G2 102 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms