RNA–Protein interactions for RNA: ENST00000344979.7

PDE4A-202, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best) BASIC

Gene PDE4A, Length 2,579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-202ENST00000344979 NOTCH2NLQ7Z3S9 236 aa10.9□□□□□ -0.66
PDE4A-202ENST00000344979 LY6G6CO95867 125 aa10.88□□□□□ -0.67
PDE4A-202ENST00000344979 ASB16-AS1Q495Z4 193 aa10.88□□□□□ -0.67
PDE4A-202ENST00000344979 TP53AIP1Q9HCN2 124 aa10.88□□□□□ -0.67
PDE4A-202ENST00000344979 CIRBP-AS1Q8TBR5 109 aa10.87□□□□□ -0.67
PDE4A-202ENST00000344979 DNAH11Q96DT5 4516 aa10.87□□□□□ -0.67
PDE4A-202ENST00000344979 ALMS1Q8TCU4 4167 aa10.86□□□□□ -0.67
PDE4A-202ENST00000344979 A8MUN3 132 aa10.85□□□□□ -0.67
PDE4A-202ENST00000344979 IGLV7-43P04211 117 aa10.85□□□□□ -0.67
PDE4A-202ENST00000344979 CD164Q04900 197 aa10.84□□□□□ -0.67
PDE4A-202ENST00000344979 DNAH5Q8TE73 4624 aa10.84□□□□□ -0.67
PDE4A-202ENST00000344979 MRPL34Q9BQ48 92 aaKnown RBP10.83□□□□□ -0.68
PDE4A-202ENST00000344979 IGLV7-46A0A075B6I9 117 aa10.81□□□□□ -0.68
PDE4A-202ENST00000344979 COA5Q86WW8 74 aa10.8□□□□□ -0.68
PDE4A-202ENST00000344979 Q8N9P0 234 aaPredicted RBP10.77□□□□□ -0.69
PDE4A-202ENST00000344979 KRTAP10-2P60368 255 aa10.76□□□□□ -0.69
PDE4A-202ENST00000344979 PRR15LQ9BU68 103 aa10.73□□□□□ -0.69
PDE4A-202ENST00000344979 Q5VV11 94 aa10.73□□□□□ -0.69
PDE4A-202ENST00000344979 LRP1BQ9NZR2 4599 aa10.71□□□□□ -0.69
PDE4A-202ENST00000344979 Q5W150 140 aa10.71□□□□□ -0.7
PDE4A-202ENST00000344979 LIMD2Q9BT23 127 aa10.7□□□□□ -0.7
PDE4A-202ENST00000344979 CHKB-CPT1BH3BT56 60 aa10.69□□□□□ -0.7
PDE4A-202ENST00000344979 A8MU10 97 aa10.67□□□□□ -0.7
PDE4A-202ENST00000344979 SSBP3-AS1Q7Z2R9 100 aa10.66□□□□□ -0.7
PDE4A-202ENST00000344979 HYDINQ4G0P3 5121 aa10.65□□□□□ -0.7
PDE4A-202ENST00000344979 SPAG11AQ6PDA7 123 aa10.65□□□□□ -0.7
PDE4A-202ENST00000344979 PKD1P98161 4303 aa10.64□□□□□ -0.71
PDE4A-202ENST00000344979 HRES1P13985 223 aa10.63□□□□□ -0.71
PDE4A-202ENST00000344979 RETNLBQ9BQ08 111 aa10.63□□□□□ -0.71
PDE4A-202ENST00000344979 LOC101927531A0A1B0GV80 90 aa10.62□□□□□ -0.71
PDE4A-202ENST00000344979 KRTAP10-1P60331 282 aa10.61□□□□□ -0.71
PDE4A-202ENST00000344979 FAT2Q9NYQ8 4349 aa10.6□□□□□ -0.71
PDE4A-202ENST00000344979 KRTAP13-2Q52LG2 175 aa10.6□□□□□ -0.71
PDE4A-202ENST00000344979 VPS13BQ7Z7G8 4022 aa10.59□□□□□ -0.71
PDE4A-202ENST00000344979 KRTAP13-3Q3SY46 172 aa10.58□□□□□ -0.72
PDE4A-202ENST00000344979 LINC00313P59037 77 aa10.58□□□□□ -0.72
PDE4A-202ENST00000344979 C8orf87E5RJ46 101 aa10.56□□□□□ -0.72
PDE4A-202ENST00000344979 A6NED7 52 aa10.55□□□□□ -0.72
PDE4A-202ENST00000344979 Q75L30 129 aa10.53□□□□□ -0.72
PDE4A-202ENST00000344979 KTN1-AS1Q86SY8 53 aa10.52□□□□□ -0.73
PDE4A-202ENST00000344979 Q6ZSA8 131 aa10.51□□□□□ -0.73
PDE4A-202ENST00000344979 PRR26Q8N8Z3 221 aa10.51□□□□□ -0.73
PDE4A-202ENST00000344979 RBM12B-AS1Q9P1G2 102 aa10.5□□□□□ -0.73
PDE4A-202ENST00000344979 LINC01558Q9Y6Z2 57 aa10.49□□□□□ -0.73
PDE4A-202ENST00000344979 SPTSSBQ8NFR3 76 aa10.49□□□□□ -0.73
PDE4A-202ENST00000344979 LCA10Q71F78 164 aa10.47□□□□□ -0.73
PDE4A-202ENST00000344979 FAM229AH3BQW9 127 aa10.46□□□□□ -0.73
PDE4A-202ENST00000344979 KRTAP1-4P0C5Y4 121 aa10.45□□□□□ -0.74
PDE4A-202ENST00000344979 PKHD1P08F94 4074 aa10.45□□□□□ -0.74
PDE4A-202ENST00000344979 ACYP2P14621 99 aa10.43□□□□□ -0.74
PDE4A-202ENST00000344979 PLA2G1BP04054 148 aaKnown RBP10.43□□□□□ -0.74
PDE4A-202ENST00000344979 ATP11AUNQ6ZP68 121 aa10.41□□□□□ -0.74
PDE4A-202ENST00000344979 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.74
PDE4A-202ENST00000344979 KRTAP16-1A8MUX0 517 aa10.38□□□□□ -0.75
PDE4A-202ENST00000344979 SPINK7P58062 85 aa10.38□□□□□ -0.75
PDE4A-202ENST00000344979 TYMSOSQ8TAI1 123 aa10.38□□□□□ -0.75
PDE4A-202ENST00000344979 IGKV2-30P06310 120 aa10.37□□□□□ -0.75
PDE4A-202ENST00000344979 IGKV2D-30A0A075B6S6 120 aa10.37□□□□□ -0.75
PDE4A-202ENST00000344979 DMAC1Q96GE9 116 aa10.36□□□□□ -0.75
PDE4A-202ENST00000344979 CDC42SE1Q9NRR8 79 aa10.34□□□□□ -0.75
PDE4A-202ENST00000344979 A6NN06 94 aa10.34□□□□□ -0.75
PDE4A-202ENST00000344979 SACSQ9NZJ4 4579 aa10.28□□□□□ -0.76
PDE4A-202ENST00000344979 SPINK1P00995 79 aa10.27□□□□□ -0.77
PDE4A-202ENST00000344979 SMR3BP02814 79 aaPredicted RBP10.25□□□□□ -0.77
PDE4A-202ENST00000344979 C7orf65Q6ZTY9 151 aa10.24□□□□□ -0.77
PDE4A-202ENST00000344979 DYNC1H1Q14204 4646 aaKnown RBP10.23□□□□□ -0.77
PDE4A-202ENST00000344979 FAT1Q14517 4588 aa10.21□□□□□ -0.77
PDE4A-202ENST00000344979 LINC00304Q8N9R0 145 aa10.21□□□□□ -0.78
PDE4A-202ENST00000344979 A0A1B0GU69 56 aa10.2□□□□□ -0.78
PDE4A-202ENST00000344979 Q8N1X5 172 aa10.13□□□□□ -0.79
PDE4A-202ENST00000344979 C9orf92A6NGG3 77 aa10.11□□□□□ -0.79
PDE4A-202ENST00000344979 APOBP04114 4563 aaKnown RBP10.07□□□□□ -0.8
PDE4A-202ENST00000344979 RPS29P62273 56 aaKnown RBP10.03□□□□□ -0.8
PDE4A-202ENST00000344979 PKHD1L1Q86WI1 4243 aa10□□□□□ -0.81
PDE4A-202ENST00000344979 UQCR11O14957 56 aa9.98□□□□□ -0.81
PDE4A-202ENST00000344979 MIR22HGQ0VDD5 57 aa9.98□□□□□ -0.81
PDE4A-202ENST00000344979 PRAC1Q96KF2 57 aa9.97□□□□□ -0.81
PDE4A-202ENST00000344979 SPATA8Q6RVD6 105 aa9.95□□□□□ -0.82
PDE4A-202ENST00000344979 A0A1B0GVY2 172 aa9.94□□□□□ -0.82
PDE4A-202ENST00000344979 KRTAP10-4P60372 401 aaPredicted RBP9.93□□□□□ -0.82
PDE4A-202ENST00000344979 A8MUU9 505 aa9.91□□□□□ -0.82
PDE4A-202ENST00000344979 C20orf166-AS1Q96NR2 134 aa9.91□□□□□ -0.82
PDE4A-202ENST00000344979 KMT2CQ8NEZ4 4911 aaKnown RBP9.9□□□□□ -0.82
PDE4A-202ENST00000344979 RYR2Q92736 4967 aa9.89□□□□□ -0.83
PDE4A-202ENST00000344979 ADM2Q7Z4H4 148 aa9.89□□□□□ -0.83
PDE4A-202ENST00000344979 KRTAP21-3Q3LHN1 58 aa9.88□□□□□ -0.83
PDE4A-202ENST00000344979 LINC01554Q52M75 96 aa9.86□□□□□ -0.83
PDE4A-202ENST00000344979 H3BS24 57 aa9.85□□□□□ -0.83
PDE4A-202ENST00000344979 LRP1Q07954 4544 aaKnown RBP9.83□□□□□ -0.84
PDE4A-202ENST00000344979 KRTAP3-1Q9BYR8 98 aa9.82□□□□□ -0.84
PDE4A-202ENST00000344979 FLG2Q5D862 2391 aaPredicted RBP9.78□□□□□ -0.84
PDE4A-202ENST00000344979 FAT3Q8TDW7 4589 aa9.75□□□□□ -0.85
PDE4A-202ENST00000344979 TNXBP22105 4242 aa9.72□□□□□ -0.85
PDE4A-202ENST00000344979 HSPG2P98160 4391 aa9.68□□□□□ -0.86
PDE4A-202ENST00000344979 MYCBP2O75592 4640 aa9.68□□□□□ -0.86
PDE4A-202ENST00000344979 H0YAA0 97 aa9.67□□□□□ -0.86
PDE4A-202ENST00000344979 DMBT1Q9UGM3 2413 aaPredicted RBP9.65□□□□□ -0.87
PDE4A-202ENST00000344979 A0A1B0GU33 70 aa9.64□□□□□ -0.87
PDE4A-202ENST00000344979 COX6B2Q6YFQ2 88 aa9.63□□□□□ -0.87
PDE4A-202ENST00000344979 CSAG1Q6PB30 78 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms