RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 COL12A1Q99715 3063 aa7.04□□□□□ -1.28
TRIOBP-202ENST00000344404 NBEAL2Q6ZNJ1 2754 aa7.02□□□□□ -1.29
TRIOBP-202ENST00000344404 STAB2Q8WWQ8 2551 aa7.01□□□□□ -1.29
TRIOBP-202ENST00000344404 ZZEF1O43149 2961 aa7.01□□□□□ -1.29
TRIOBP-202ENST00000344404 GCN1Q92616 2671 aaKnown RBP6.97□□□□□ -1.29
TRIOBP-202ENST00000344404 TNP1P09430 55 aa6.96□□□□□ -1.29
TRIOBP-202ENST00000344404 ZNF292O60281 2723 aa6.96□□□□□ -1.3
TRIOBP-202ENST00000344404 KRTAP10-8P60410 259 aa6.95□□□□□ -1.3
TRIOBP-202ENST00000344404 KRTAP11-1Q8IUC1 163 aa6.95□□□□□ -1.3
TRIOBP-202ENST00000344404 NDUFAF8A1L188 74 aa6.94□□□□□ -1.3
TRIOBP-202ENST00000344404 TACC2O95359 2948 aa6.94□□□□□ -1.3
TRIOBP-202ENST00000344404 APCP25054 2843 aa6.91□□□□□ -1.3
TRIOBP-202ENST00000344404 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
TRIOBP-202ENST00000344404 DMXL1Q9Y485 3027 aa6.89□□□□□ -1.31
TRIOBP-202ENST00000344404 KMT2BQ9UMN6 2715 aaPredicted RBP6.89□□□□□ -1.31
TRIOBP-202ENST00000344404 TNRC18O15417 2968 aaPredicted RBP6.87□□□□□ -1.31
TRIOBP-202ENST00000344404 NOTCH1P46531 2555 aa6.87□□□□□ -1.31
TRIOBP-202ENST00000344404 CSMD1Q96PZ7 3565 aa6.85□□□□□ -1.31
TRIOBP-202ENST00000344404 ZFHX4Q86UP3 3567 aa6.85□□□□□ -1.31
TRIOBP-202ENST00000344404 UTP20O75691 2785 aaKnown RBP6.84□□□□□ -1.31
TRIOBP-202ENST00000344404 RELNP78509 3460 aa6.82□□□□□ -1.32
TRIOBP-202ENST00000344404 IGSF10Q6WRI0 2623 aa6.8□□□□□ -1.32
TRIOBP-202ENST00000344404 KRTAP4-16G5E9R7 235 aaPredicted RBP6.8□□□□□ -1.32
TRIOBP-202ENST00000344404 KRTAP13-2Q52LG2 175 aa6.8□□□□□ -1.32
TRIOBP-202ENST00000344404 NSD1Q96L73 2696 aaPredicted RBP6.78□□□□□ -1.32
TRIOBP-202ENST00000344404 P0C880 135 aa6.77□□□□□ -1.33
TRIOBP-202ENST00000344404 Q6ZRN7 208 aaPredicted RBP6.76□□□□□ -1.33
TRIOBP-202ENST00000344404 HIVEP1P15822 2718 aa6.76□□□□□ -1.33
TRIOBP-202ENST00000344404 NBEAQ8NFP9 2946 aa6.75□□□□□ -1.33
TRIOBP-202ENST00000344404 KRTAP29-1A8MX34 341 aaPredicted RBP6.75□□□□□ -1.33
TRIOBP-202ENST00000344404 KRTAP10-10P60014 251 aa6.74□□□□□ -1.33
TRIOBP-202ENST00000344404 UBR5O95071 2799 aaPredicted RBP6.73□□□□□ -1.33
TRIOBP-202ENST00000344404 SPENQ96T58 3664 aaKnown RBP6.71□□□□□ -1.33
TRIOBP-202ENST00000344404 DMDP11532 3685 aa6.71□□□□□ -1.34
TRIOBP-202ENST00000344404 RPS29P62273 56 aaKnown RBP6.67□□□□□ -1.34
TRIOBP-202ENST00000344404 ASB16-AS1Q495Z4 193 aa6.67□□□□□ -1.34
TRIOBP-202ENST00000344404 KRTAP7-1Q8IUC3 87 aa6.66□□□□□ -1.34
TRIOBP-202ENST00000344404 CELSR2Q9HCU4 2923 aa6.63□□□□□ -1.35
TRIOBP-202ENST00000344404 ITPR1Q14643 2758 aa6.63□□□□□ -1.35
TRIOBP-202ENST00000344404 KRTAP21-3Q3LHN1 58 aa6.61□□□□□ -1.35
TRIOBP-202ENST00000344404 ZFHX3Q15911 3703 aa6.61□□□□□ -1.35
TRIOBP-202ENST00000344404 A6NN06 94 aa6.61□□□□□ -1.35
TRIOBP-202ENST00000344404 CELSR1Q9NYQ6 3014 aa6.6□□□□□ -1.35
TRIOBP-202ENST00000344404 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
TRIOBP-202ENST00000344404 SMG1Q96Q15 3661 aaKnown RBP6.56□□□□□ -1.36
TRIOBP-202ENST00000344404 XP32Q5T750 250 aa6.54□□□□□ -1.36
TRIOBP-202ENST00000344404 CUBNO60494 3623 aa6.53□□□□□ -1.36
TRIOBP-202ENST00000344404 FLNCQ14315 2725 aa6.51□□□□□ -1.37
TRIOBP-202ENST00000344404 TENM1Q9UKZ4 2725 aa6.49□□□□□ -1.37
TRIOBP-202ENST00000344404 KRTAP13-1Q8IUC0 172 aa6.49□□□□□ -1.37
TRIOBP-202ENST00000344404 TENM4Q6N022 2769 aa6.48□□□□□ -1.37
TRIOBP-202ENST00000344404 DCHS2Q6V1P9 2916 aa6.48□□□□□ -1.37
TRIOBP-202ENST00000344404 SVEP1Q4LDE5 3571 aa6.48□□□□□ -1.37
TRIOBP-202ENST00000344404 PP632Q6XCG6 107 aa6.46□□□□□ -1.38
TRIOBP-202ENST00000344404 CSMD2Q7Z408 3487 aa6.38□□□□□ -1.39
TRIOBP-202ENST00000344404 FBN2P35556 2912 aa6.37□□□□□ -1.39
TRIOBP-202ENST00000344404 MUC3AQ02505 3323 aa6.36□□□□□ -1.39
TRIOBP-202ENST00000344404 TENM2Q9NT68 2774 aa6.35□□□□□ -1.39
TRIOBP-202ENST00000344404 NF1P21359 2839 aa6.33□□□□□ -1.4
TRIOBP-202ENST00000344404 TPRXLQ17RH7 258 aa6.32□□□□□ -1.4
TRIOBP-202ENST00000344404 PKD1L1Q8TDX9 2849 aa6.32□□□□□ -1.4
TRIOBP-202ENST00000344404 KRTAP1-4P0C5Y4 121 aa6.31□□□□□ -1.4
TRIOBP-202ENST00000344404 H0YAA0 97 aa6.31□□□□□ -1.4
TRIOBP-202ENST00000344404 NIPBLQ6KC79 2804 aaeCLIP6.3□□□□□ -1.4
TRIOBP-202ENST00000344404 VWFP04275 2813 aa6.29□□□□□ -1.4
TRIOBP-202ENST00000344404 ZANQ9Y493 2812 aa6.25□□□□□ -1.41
TRIOBP-202ENST00000344404 KRTAP13-3Q3SY46 172 aa6.2□□□□□ -1.42
TRIOBP-202ENST00000344404 HRNRQ86YZ3 2850 aaPredicted RBP6.2□□□□□ -1.42
TRIOBP-202ENST00000344404 KRTAP12-2P59991 146 aa6.19□□□□□ -1.42
TRIOBP-202ENST00000344404 CRCT1Q9UGL9 99 aa6.18□□□□□ -1.42
TRIOBP-202ENST00000344404 VPS13CQ709C8 3753 aa6.15□□□□□ -1.43
TRIOBP-202ENST00000344404 BSNQ9UPA5 3926 aa6.15□□□□□ -1.43
TRIOBP-202ENST00000344404 TENM3Q9P273 2699 aa6.08□□□□□ -1.44
TRIOBP-202ENST00000344404 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
TRIOBP-202ENST00000344404 TRRAPQ9Y4A5 3859 aa6.06□□□□□ -1.44
TRIOBP-202ENST00000344404 MXRA5Q9NR99 2828 aa6.06□□□□□ -1.44
TRIOBP-202ENST00000344404 CSMD3Q7Z407 3707 aa6.05□□□□□ -1.44
TRIOBP-202ENST00000344404 PDZD2O15018 2839 aa6.03□□□□□ -1.44
TRIOBP-202ENST00000344404 TGP01266 2768 aa6.02□□□□□ -1.45
TRIOBP-202ENST00000344404 KRTAP13-4Q3LI77 160 aa5.91□□□□□ -1.46
TRIOBP-202ENST00000344404 ANK3Q12955 4377 aaKnown RBP5.89□□□□□ -1.47
TRIOBP-202ENST00000344404 MEGF8Q7Z7M0 2845 aa5.87□□□□□ -1.47
TRIOBP-202ENST00000344404 COL7A1Q02388 2944 aa5.87□□□□□ -1.47
TRIOBP-202ENST00000344404 SRRM2Q9UQ35 2752 aaKnown RBP5.82□□□□□ -1.48
TRIOBP-202ENST00000344404 AKAP9Q99996 3911 aa5.81□□□□□ -1.48
TRIOBP-202ENST00000344404 KRTAP4-5Q9BYR2 181 aa5.81□□□□□ -1.48
TRIOBP-202ENST00000344404 KRTAP12-1P59990 96 aa5.8□□□□□ -1.48
TRIOBP-202ENST00000344404 FBN1P35555 2871 aaKnown RBP5.79□□□□□ -1.48
TRIOBP-202ENST00000344404 ZNF469Q96JG9 3925 aaPredicted RBP5.74□□□□□ -1.49
TRIOBP-202ENST00000344404 HUWE1Q7Z6Z7 4374 aaKnown RBP5.71□□□□□ -1.5
TRIOBP-202ENST00000344404 LORP23490 312 aaPredicted RBP5.68□□□□□ -1.5
TRIOBP-202ENST00000344404 FBN3Q75N90 2809 aa5.62□□□□□ -1.51
TRIOBP-202ENST00000344404 KRTAP3-1Q9BYR8 98 aa5.61□□□□□ -1.51
TRIOBP-202ENST00000344404 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
TRIOBP-202ENST00000344404 OTOGQ6ZRI0 2925 aa5.52□□□□□ -1.53
TRIOBP-202ENST00000344404 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
TRIOBP-202ENST00000344404 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
TRIOBP-202ENST00000344404 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
TRIOBP-202ENST00000344404 ALMS1Q8TCU4 4167 aa5.47□□□□□ -1.53
TRIOBP-202ENST00000344404 INE1O15225 51 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms