RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 DCAF8L2P0C7V8 631 aa22.06■■□□□ 1.12
TRIOBP-202ENST00000344404 EHMT2Q96KQ7 1210 aa20.5■□□□□ 0.87
TRIOBP-202ENST00000344404 SUPT5HO00267 1087 aaKnown RBP20.08■□□□□ 0.8
TRIOBP-202ENST00000344404 SHROOM4Q9ULL8 1493 aa19.88■□□□□ 0.77
TRIOBP-202ENST00000344404 TTBK1Q5TCY1 1321 aaPredicted RBP19.62■□□□□ 0.73
TRIOBP-202ENST00000344404 RANGAP1P46060 587 aaPredicted RBP19.54■□□□□ 0.72
TRIOBP-202ENST00000344404 PELP1Q8IZL8 1130 aaKnown RBP19.52■□□□□ 0.72
TRIOBP-202ENST00000344404 ATP1B4Q9UN42 357 aaPredicted RBP19.35■□□□□ 0.69
TRIOBP-202ENST00000344404 APLP2Q06481 763 aa19.29■□□□□ 0.68
TRIOBP-202ENST00000344404 FAM9AQ8IZU1 332 aaPredicted RBP19.25■□□□□ 0.67
TRIOBP-202ENST00000344404 ERICH6Q7L0X2 663 aa19.16■□□□□ 0.66
TRIOBP-202ENST00000344404 CHIC1Q5VXU3 224 aa18.96■□□□□ 0.62
TRIOBP-202ENST00000344404 MYT1LQ9UL68 1186 aa18.9■□□□□ 0.62
TRIOBP-202ENST00000344404 PCGF6Q9BYE7 350 aa18.85■□□□□ 0.61
TRIOBP-202ENST00000344404 MYT1Q01538 1121 aa18.73■□□□□ 0.59
TRIOBP-202ENST00000344404 CCER1Q8TC90 406 aaPredicted RBP18.72■□□□□ 0.59
TRIOBP-202ENST00000344404 NISCHQ9Y2I1 1504 aa18.66■□□□□ 0.58
TRIOBP-202ENST00000344404 YTHDC1Q96MU7 727 aaKnown RBP18.54■□□□□ 0.56
TRIOBP-202ENST00000344404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
TRIOBP-202ENST00000344404 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
TRIOBP-202ENST00000344404 CNGB1Q14028 1251 aaPredicted RBP18.5■□□□□ 0.55
TRIOBP-202ENST00000344404 UBTFP17480 764 aaKnown RBP18.48■□□□□ 0.55
TRIOBP-202ENST00000344404 POLR3GLQ9BT43 218 aa18.48■□□□□ 0.55
TRIOBP-202ENST00000344404 PPARGC1BQ86YN6 1023 aaKnown RBP18.47■□□□□ 0.55
TRIOBP-202ENST00000344404 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
TRIOBP-202ENST00000344404 NEFLP07196 543 aa18.35■□□□□ 0.53
TRIOBP-202ENST00000344404 CENPBP07199 599 aaPredicted RBP18.32■□□□□ 0.52
TRIOBP-202ENST00000344404 ITGAEP38570 1179 aa18.3■□□□□ 0.52
TRIOBP-202ENST00000344404 TRIM41Q8WV44 630 aa18.29■□□□□ 0.52
TRIOBP-202ENST00000344404 DAXXQ9UER7 740 aaPredicted RBP18.25■□□□□ 0.51
TRIOBP-202ENST00000344404 PLPPR3Q6T4P5 718 aa18.09■□□□□ 0.49
TRIOBP-202ENST00000344404 SLC24A1O60721 1099 aa17.94■□□□□ 0.46
TRIOBP-202ENST00000344404 BCL11AQ9H165 835 aa17.92■□□□□ 0.46
TRIOBP-202ENST00000344404 FBLN2P98095 1184 aa17.89■□□□□ 0.45
TRIOBP-202ENST00000344404 BCANQ96GW7 911 aa17.86■□□□□ 0.45
TRIOBP-202ENST00000344404 CLSPNQ9HAW4 1339 aa17.83■□□□□ 0.45
TRIOBP-202ENST00000344404 ZEB1P37275 1124 aaPredicted RBP17.8■□□□□ 0.44
TRIOBP-202ENST00000344404 ZNF316A6NFI3 1004 aaPredicted RBP17.78■□□□□ 0.44
TRIOBP-202ENST00000344404 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
TRIOBP-202ENST00000344404 ARID3CA6NKF2 412 aa17.65■□□□□ 0.42
TRIOBP-202ENST00000344404 FAM50AQ14320 339 aaKnown RBP17.58■□□□□ 0.4
TRIOBP-202ENST00000344404 TRIM52Q96A61 297 aa17.54■□□□□ 0.4
TRIOBP-202ENST00000344404 ZNF326Q5BKZ1 582 aaKnown RBP17.54■□□□□ 0.4
TRIOBP-202ENST00000344404 RTL5Q5HYW3 569 aaPredicted RBP17.51■□□□□ 0.39
TRIOBP-202ENST00000344404 ABCC9O60706 1549 aa17.47■□□□□ 0.39
TRIOBP-202ENST00000344404 PLEKHG5O94827 1062 aa17.47■□□□□ 0.39
TRIOBP-202ENST00000344404 ZBTB47Q9UFB7 747 aaPredicted RBP17.45■□□□□ 0.38
TRIOBP-202ENST00000344404 SENP3Q9H4L4 574 aaPredicted RBP17.43■□□□□ 0.38
TRIOBP-202ENST00000344404 NEUROD1Q13562 356 aa17.42■□□□□ 0.38
TRIOBP-202ENST00000344404 A0A0G2JS52 829 aa17.41■□□□□ 0.38
TRIOBP-202ENST00000344404 LOC105371045A0A1W2PR82 267 aa17.41■□□□□ 0.38
TRIOBP-202ENST00000344404 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
TRIOBP-202ENST00000344404 P3H3Q8IVL6 736 aa17.32■□□□□ 0.36
TRIOBP-202ENST00000344404 ESF1Q9H501 851 aaKnown RBP17.31■□□□□ 0.36
TRIOBP-202ENST00000344404 TRIM26Q12899 539 aaPredicted RBP17.28■□□□□ 0.36
TRIOBP-202ENST00000344404 CANXP27824 592 aaKnown RBP17.26■□□□□ 0.35
TRIOBP-202ENST00000344404 ZNF777Q9ULD5 760 aaPredicted RBP17.25■□□□□ 0.35
TRIOBP-202ENST00000344404 CHGAP10645 457 aaKnown RBP17.24■□□□□ 0.35
TRIOBP-202ENST00000344404 HRCP23327 699 aa17.23■□□□□ 0.35
TRIOBP-202ENST00000344404 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
TRIOBP-202ENST00000344404 ZBTB7CA1YPR0 619 aa17.15■□□□□ 0.34
TRIOBP-202ENST00000344404 NEFMP07197 916 aa17.1■□□□□ 0.33
TRIOBP-202ENST00000344404 DIEXFQ68CQ4 756 aaKnown RBP17.02■□□□□ 0.32
TRIOBP-202ENST00000344404 NPM2Q86SE8 214 aaKnown RBP17.01■□□□□ 0.31
TRIOBP-202ENST00000344404 NPM1P06748 294 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRIOBP-202ENST00000344404 C14orf37Q86TY3 774 aa16.94■□□□□ 0.3
TRIOBP-202ENST00000344404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.31e-6■■□□□ 13.9
TRIOBP-202ENST00000344404 ANP32CO43423 234 aa16.93■□□□□ 0.3
TRIOBP-202ENST00000344404 CDK11AQ9UQ88 783 aaPredicted RBP16.91■□□□□ 0.3
TRIOBP-202ENST00000344404 TULP1O00294 542 aaPredicted RBP16.9■□□□□ 0.3
TRIOBP-202ENST00000344404 SALL2Q9Y467 1007 aaPredicted RBP16.89■□□□□ 0.29
TRIOBP-202ENST00000344404 HSP90AA1P07900 732 aaKnown RBP16.87■□□□□ 0.29
TRIOBP-202ENST00000344404 EIF5BO60841 1220 aaKnown RBP16.85■□□□□ 0.29
TRIOBP-202ENST00000344404 ARXQ96QS3 562 aa16.84■□□□□ 0.29
TRIOBP-202ENST00000344404 ARID4BQ4LE39 1312 aaPredicted RBP16.83■□□□□ 0.28
TRIOBP-202ENST00000344404 HAP1P54257 671 aaPredicted RBP16.81■□□□□ 0.28
TRIOBP-202ENST00000344404 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
TRIOBP-202ENST00000344404 CDK11BP21127 795 aaKnown RBP16.79■□□□□ 0.28
TRIOBP-202ENST00000344404 ANP32BQ92688 251 aaKnown RBP16.78■□□□□ 0.28
TRIOBP-202ENST00000344404 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
TRIOBP-202ENST00000344404 GTF3C3Q9Y5Q9 886 aa16.72■□□□□ 0.27
TRIOBP-202ENST00000344404 KCNH8Q96L42 1107 aa16.7■□□□□ 0.26
TRIOBP-202ENST00000344404 ANP32AP39687 249 aaKnown RBP16.69■□□□□ 0.26
TRIOBP-202ENST00000344404 CHIC2Q9UKJ5 165 aa16.66■□□□□ 0.26
TRIOBP-202ENST00000344404 KDM2AQ9Y2K7 1162 aa16.66■□□□□ 0.26
TRIOBP-202ENST00000344404 LMOD2Q6P5Q4 547 aa16.64■□□□□ 0.25
TRIOBP-202ENST00000344404 TAOK2Q9UL54 1235 aa16.63■□□□□ 0.25
TRIOBP-202ENST00000344404 TPRNQ4KMQ1 711 aa16.62■□□□□ 0.25
TRIOBP-202ENST00000344404 NPHP1O15259 732 aa16.59■□□□□ 0.25
TRIOBP-202ENST00000344404 FAM9BQ8IZU0 186 aa16.59■□□□□ 0.25
TRIOBP-202ENST00000344404 PPP1R15AO75807 674 aaPredicted RBP16.59■□□□□ 0.25
TRIOBP-202ENST00000344404 CHMP7Q8WUX9 453 aaPredicted RBP16.55■□□□□ 0.24
TRIOBP-202ENST00000344404 SENP3-EIF4A1A0A087X0R7 540 aa16.53■□□□□ 0.24
TRIOBP-202ENST00000344404 UPF2Q9HAU5 1272 aaKnown RBP16.53■□□□□ 0.24
TRIOBP-202ENST00000344404 SCRIBQ14160 1630 aa16.52■□□□□ 0.23
TRIOBP-202ENST00000344404 NBR1Q14596 966 aa16.5■□□□□ 0.23
TRIOBP-202ENST00000344404 PPM1GO15355 546 aaPredicted RBP16.47■□□□□ 0.23
TRIOBP-202ENST00000344404 MLECQ14165 292 aa16.46■□□□□ 0.23
TRIOBP-202ENST00000344404 FKBP8Q14318 412 aa16.45■□□□□ 0.22
TRIOBP-202ENST00000344404 TMC1Q8TDI8 760 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms