RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 ZZEF1O43149 2961 aa7.96□□□□□ -1.14
PDE4D-203ENST00000340635 A0A087X002 238 aa7.96□□□□□ -1.14
PDE4D-203ENST00000340635 ADGRG4Q8IZF6 3080 aa7.95□□□□□ -1.14
PDE4D-203ENST00000340635 NSD1Q96L73 2696 aaPredicted RBP7.94□□□□□ -1.14
PDE4D-203ENST00000340635 TACC2O95359 2948 aa7.93□□□□□ -1.14
PDE4D-203ENST00000340635 UTP20O75691 2785 aaKnown RBP7.91□□□□□ -1.14
PDE4D-203ENST00000340635 CHD9Q3L8U1 2897 aa7.91□□□□□ -1.14
PDE4D-203ENST00000340635 MYO15AQ9UKN7 3530 aa7.9□□□□□ -1.15
PDE4D-203ENST00000340635 KRTAP4-16G5E9R7 235 aaPredicted RBP7.88□□□□□ -1.15
PDE4D-203ENST00000340635 ATMQ13315 3056 aa7.87□□□□□ -1.15
PDE4D-203ENST00000340635 RPS29P62273 56 aaKnown RBP7.87□□□□□ -1.15
PDE4D-203ENST00000340635 EYSQ5T1H1 3165 aa7.86□□□□□ -1.15
PDE4D-203ENST00000340635 DMXL1Q9Y485 3027 aa7.86□□□□□ -1.15
PDE4D-203ENST00000340635 NOTCH2NLQ7Z3S9 236 aa7.86□□□□□ -1.15
PDE4D-203ENST00000340635 P0C880 135 aa7.85□□□□□ -1.15
PDE4D-203ENST00000340635 PP632Q6XCG6 107 aa7.82□□□□□ -1.16
PDE4D-203ENST00000340635 ITPR1Q14643 2758 aa7.82□□□□□ -1.16
PDE4D-203ENST00000340635 KRTAP10-8P60410 259 aa7.82□□□□□ -1.16
PDE4D-203ENST00000340635 ASPMQ8IZT6 3477 aa7.8□□□□□ -1.16
PDE4D-203ENST00000340635 KRTAP11-1Q8IUC1 163 aa7.79□□□□□ -1.16
PDE4D-203ENST00000340635 NBEAQ8NFP9 2946 aa7.78□□□□□ -1.16
PDE4D-203ENST00000340635 UBR5O95071 2799 aaPredicted RBP7.76□□□□□ -1.17
PDE4D-203ENST00000340635 LAMA5O15230 3695 aa7.76□□□□□ -1.17
PDE4D-203ENST00000340635 NBPF19A0A087WUL8 3843 aa7.74□□□□□ -1.17
PDE4D-203ENST00000340635 IGSF10Q6WRI0 2623 aa7.72□□□□□ -1.17
PDE4D-203ENST00000340635 TNRC18O15417 2968 aaPredicted RBP7.72□□□□□ -1.17
PDE4D-203ENST00000340635 LOC400499M0QZD8 3231 aa7.67□□□□□ -1.18
PDE4D-203ENST00000340635 CELSR2Q9HCU4 2923 aa7.65□□□□□ -1.18
PDE4D-203ENST00000340635 Q6ZRN7 208 aaPredicted RBP7.63□□□□□ -1.19
PDE4D-203ENST00000340635 PRO2289Q9P1D8 64 aa7.62□□□□□ -1.19
PDE4D-203ENST00000340635 DCHS1Q96JQ0 3298 aa7.6□□□□□ -1.19
PDE4D-203ENST00000340635 HIVEP1P15822 2718 aa7.58□□□□□ -1.2
PDE4D-203ENST00000340635 A0A1B0GVY2 172 aa7.57□□□□□ -1.2
PDE4D-203ENST00000340635 KRTAP13-2Q52LG2 175 aa7.57□□□□□ -1.2
PDE4D-203ENST00000340635 TENM1Q9UKZ4 2725 aa7.54□□□□□ -1.2
PDE4D-203ENST00000340635 CELSR1Q9NYQ6 3014 aa7.52□□□□□ -1.21
PDE4D-203ENST00000340635 RELNP78509 3460 aa7.49□□□□□ -1.21
PDE4D-203ENST00000340635 SPENQ96T58 3664 aaKnown RBP7.48□□□□□ -1.21
PDE4D-203ENST00000340635 DCHS2Q6V1P9 2916 aa7.48□□□□□ -1.21
PDE4D-203ENST00000340635 NF1P21359 2839 aa7.47□□□□□ -1.21
PDE4D-203ENST00000340635 FLNCQ14315 2725 aa7.46□□□□□ -1.21
PDE4D-203ENST00000340635 KRTAP10-10P60014 251 aa7.46□□□□□ -1.21
PDE4D-203ENST00000340635 NIPBLQ6KC79 2804 aaeCLIP7.45□□□□□ -1.22
PDE4D-203ENST00000340635 ZFHX4Q86UP3 3567 aa7.43□□□□□ -1.22
PDE4D-203ENST00000340635 KRTAP13-1Q8IUC0 172 aa7.42□□□□□ -1.22
PDE4D-203ENST00000340635 CSMD1Q96PZ7 3565 aa7.41□□□□□ -1.22
PDE4D-203ENST00000340635 FBN2P35556 2912 aa7.39□□□□□ -1.23
PDE4D-203ENST00000340635 H0YAA0 97 aa7.37□□□□□ -1.23
PDE4D-203ENST00000340635 KRTAP7-1Q8IUC3 87 aa7.36□□□□□ -1.23
PDE4D-203ENST00000340635 XP32Q5T750 250 aa7.34□□□□□ -1.24
PDE4D-203ENST00000340635 ZANQ9Y493 2812 aa7.31□□□□□ -1.24
PDE4D-203ENST00000340635 SMG1Q96Q15 3661 aaKnown RBP7.29□□□□□ -1.24
PDE4D-203ENST00000340635 DMDP11532 3685 aa7.29□□□□□ -1.24
PDE4D-203ENST00000340635 ZFHX3Q15911 3703 aa7.26□□□□□ -1.25
PDE4D-203ENST00000340635 PDZD2O15018 2839 aa7.19□□□□□ -1.26
PDE4D-203ENST00000340635 TPRXLQ17RH7 258 aa7.19□□□□□ -1.26
PDE4D-203ENST00000340635 HRNRQ86YZ3 2850 aaPredicted RBP7.17□□□□□ -1.26
PDE4D-203ENST00000340635 TENM3Q9P273 2699 aa7.14□□□□□ -1.27
PDE4D-203ENST00000340635 MXRA5Q9NR99 2828 aa7.12□□□□□ -1.27
PDE4D-203ENST00000340635 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
PDE4D-203ENST00000340635 PKD1L1Q8TDX9 2849 aa7.12□□□□□ -1.27
PDE4D-203ENST00000340635 VWFP04275 2813 aa7.1□□□□□ -1.27
PDE4D-203ENST00000340635 CUBNO60494 3623 aa7.07□□□□□ -1.28
PDE4D-203ENST00000340635 TENM4Q6N022 2769 aa7.07□□□□□ -1.28
PDE4D-203ENST00000340635 TGP01266 2768 aa7.05□□□□□ -1.28
PDE4D-203ENST00000340635 SVEP1Q4LDE5 3571 aa7.02□□□□□ -1.29
PDE4D-203ENST00000340635 KRTAP1-4P0C5Y4 121 aa7.02□□□□□ -1.29
PDE4D-203ENST00000340635 TENM2Q9NT68 2774 aa6.99□□□□□ -1.29
PDE4D-203ENST00000340635 VPS13CQ709C8 3753 aa6.97□□□□□ -1.29
PDE4D-203ENST00000340635 KRTAP13-4Q3LI77 160 aa6.96□□□□□ -1.3
PDE4D-203ENST00000340635 KRTAP15-1Q3LI76 137 aa6.95□□□□□ -1.3
PDE4D-203ENST00000340635 KRTAP13-3Q3SY46 172 aa6.95□□□□□ -1.3
PDE4D-203ENST00000340635 KRTAP21-3Q3LHN1 58 aa6.92□□□□□ -1.3
PDE4D-203ENST00000340635 COL7A1Q02388 2944 aa6.87□□□□□ -1.31
PDE4D-203ENST00000340635 MUC3AQ02505 3323 aa6.86□□□□□ -1.31
PDE4D-203ENST00000340635 BSNQ9UPA5 3926 aa6.85□□□□□ -1.31
PDE4D-203ENST00000340635 CSMD2Q7Z408 3487 aa6.83□□□□□ -1.32
PDE4D-203ENST00000340635 INE1O15225 51 aa6.78□□□□□ -1.32
PDE4D-203ENST00000340635 TRRAPQ9Y4A5 3859 aa6.77□□□□□ -1.33
PDE4D-203ENST00000340635 SRRM2Q9UQ35 2752 aaKnown RBP6.76□□□□□ -1.33
PDE4D-203ENST00000340635 KRTAP12-1P59990 96 aa6.72□□□□□ -1.33
PDE4D-203ENST00000340635 MEGF8Q7Z7M0 2845 aa6.7□□□□□ -1.34
PDE4D-203ENST00000340635 AKAP9Q99996 3911 aa6.69□□□□□ -1.34
PDE4D-203ENST00000340635 CRCT1Q9UGL9 99 aa6.69□□□□□ -1.34
PDE4D-203ENST00000340635 CSMD3Q7Z407 3707 aa6.61□□□□□ -1.35
PDE4D-203ENST00000340635 FBN1P35555 2871 aaKnown RBP6.61□□□□□ -1.35
PDE4D-203ENST00000340635 FBN3Q75N90 2809 aa6.48□□□□□ -1.37
PDE4D-203ENST00000340635 OTOGQ6ZRI0 2925 aa6.43□□□□□ -1.38
PDE4D-203ENST00000340635 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
PDE4D-203ENST00000340635 ZNF469Q96JG9 3925 aaPredicted RBP6.42□□□□□ -1.38
PDE4D-203ENST00000340635 KRTAP3-1Q9BYR8 98 aa6.34□□□□□ -1.39
PDE4D-203ENST00000340635 KRTAP10-6P60371 365 aaPredicted RBP6.3□□□□□ -1.4
PDE4D-203ENST00000340635 KRTAP12-3P60328 96 aa6.19□□□□□ -1.42
PDE4D-203ENST00000340635 KRTAP10-5P60370 271 aa6.19□□□□□ -1.42
PDE4D-203ENST00000340635 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
PDE4D-203ENST00000340635 LYSTQ99698 3801 aa6.05□□□□□ -1.44
PDE4D-203ENST00000340635 LCE3AQ5TA76 89 aa6.03□□□□□ -1.44
PDE4D-203ENST00000340635 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
PDE4D-203ENST00000340635 KRTAP8-1Q8IUC2 63 aa5.95□□□□□ -1.46
PDE4D-203ENST00000340635 ANK3Q12955 4377 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms