RNA–Protein interactions for RNA: ENST00000340356.8

SOX18-201, Transcript of SRY-box 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX18, Length 1,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18-201ENST00000340356 SMIM20Q8N5G0 67 aa12.36□□□□□ -0.43
SOX18-201ENST00000340356 Q5XG85 94 aa12.36□□□□□ -0.43
SOX18-201ENST00000340356 SPAG11AQ6PDA7 123 aa12.35□□□□□ -0.43
SOX18-201ENST00000340356 NDUFB1O75438 58 aa12.34□□□□□ -0.43
SOX18-201ENST00000340356 ASB16-AS1Q495Z4 193 aa12.34□□□□□ -0.43
SOX18-201ENST00000340356 LIMD2Q9BT23 127 aa12.34□□□□□ -0.43
SOX18-201ENST00000340356 WFDC13Q8IUB5 93 aa12.33□□□□□ -0.44
SOX18-201ENST00000340356 TRAV7A0A075B6U4 112 aa12.32□□□□□ -0.44
SOX18-201ENST00000340356 C1orf195Q5TG92 126 aa12.31□□□□□ -0.44
SOX18-201ENST00000340356 MT1HL1P0DM35 61 aa12.31□□□□□ -0.44
SOX18-201ENST00000340356 ABCA13Q86UQ4 5058 aa12.3□□□□□ -0.44
SOX18-201ENST00000340356 RPS29P62273 56 aaKnown RBP12.28□□□□□ -0.44
SOX18-201ENST00000340356 OCR1Q9BZK8 76 aa12.27□□□□□ -0.45
SOX18-201ENST00000340356 A0A1B0GVX0 72 aa12.26□□□□□ -0.45
SOX18-201ENST00000340356 CASC2Q6XLA1 102 aa12.26□□□□□ -0.45
SOX18-201ENST00000340356 IGHV6-1A0A0B4J1U7 121 aa12.25□□□□□ -0.45
SOX18-201ENST00000340356 MMP24-AS1A0A0U1RRL7 71 aa12.25□□□□□ -0.45
SOX18-201ENST00000340356 KRTAP29-1A8MX34 341 aaPredicted RBP12.25□□□□□ -0.45
SOX18-201ENST00000340356 C8orf17Q9NRJ1 99 aa12.21□□□□□ -0.45
SOX18-201ENST00000340356 OXTP01178 125 aa12.21□□□□□ -0.46
SOX18-201ENST00000340356 RETNLBQ9BQ08 111 aa12.19□□□□□ -0.46
SOX18-201ENST00000340356 hDV103S1A0JD37 113 aa12.19□□□□□ -0.46
SOX18-201ENST00000340356 C20orf197Q8N268 126 aa12.18□□□□□ -0.46
SOX18-201ENST00000340356 NOTCH2NLQ7Z3S9 236 aa12.16□□□□□ -0.46
SOX18-201ENST00000340356 CYSTM1Q9H1C7 97 aa12.14□□□□□ -0.47
SOX18-201ENST00000340356 DMBT1Q9UGM3 2413 aaPredicted RBP12.14□□□□□ -0.47
SOX18-201ENST00000340356 TMEM254Q8TBM7 123 aa12.09□□□□□ -0.47
SOX18-201ENST00000340356 SNURFQ9Y675 71 aa12.09□□□□□ -0.47
SOX18-201ENST00000340356 C8orf87E5RJ46 101 aa12.06□□□□□ -0.48
SOX18-201ENST00000340356 KLKP1Q107X0 134 aa12.06□□□□□ -0.48
SOX18-201ENST00000340356 MRPL34Q9BQ48 92 aaKnown RBP12.06□□□□□ -0.48
SOX18-201ENST00000340356 LINC00313P59037 77 aa12.02□□□□□ -0.48
SOX18-201ENST00000340356 A0A0U1RQV1 116 aa12.02□□□□□ -0.49
SOX18-201ENST00000340356 NDUFS5O43920 106 aa12.02□□□□□ -0.49
SOX18-201ENST00000340356 C5orf47Q569G3 176 aa12.02□□□□□ -0.49
SOX18-201ENST00000340356 TMEM258P61165 79 aa12□□□□□ -0.49
SOX18-201ENST00000340356 J3QL48 77 aa11.98□□□□□ -0.49
SOX18-201ENST00000340356 TP53AIP1Q9HCN2 124 aa11.96□□□□□ -0.49
SOX18-201ENST00000340356 NDUFC1O43677 76 aa11.95□□□□□ -0.5
SOX18-201ENST00000340356 C9orf92A6NGG3 77 aa11.95□□□□□ -0.5
SOX18-201ENST00000340356 H0Y9P7 68 aa11.95□□□□□ -0.5
SOX18-201ENST00000340356 MP68P56378 58 aa11.95□□□□□ -0.5
SOX18-201ENST00000340356 KRTAP16-1A8MUX0 517 aa11.93□□□□□ -0.5
SOX18-201ENST00000340356 H7BZZ5 65 aa11.93□□□□□ -0.5
SOX18-201ENST00000340356 PCLOQ9Y6V0 5065 aa11.93□□□□□ -0.5
SOX18-201ENST00000340356 TRAV22A0A0B4J277 110 aa11.92□□□□□ -0.5
SOX18-201ENST00000340356 ZCCHC13Q8WW36 166 aaKnown RBP11.9□□□□□ -0.5
SOX18-201ENST00000340356 FP248Q71RG6 208 aaPredicted RBP11.89□□□□□ -0.51
SOX18-201ENST00000340356 LINC00208Q96KT6 92 aa11.89□□□□□ -0.51
SOX18-201ENST00000340356 IGLV7-46A0A075B6I9 117 aa11.87□□□□□ -0.51
SOX18-201ENST00000340356 PRR4Q16378 134 aa11.86□□□□□ -0.51
SOX18-201ENST00000340356 Q8N9P0 234 aaPredicted RBP11.86□□□□□ -0.51
SOX18-201ENST00000340356 H3BPC8 53 aa11.84□□□□□ -0.51
SOX18-201ENST00000340356 C1orf64Q8NEQ6 169 aa11.83□□□□□ -0.52
SOX18-201ENST00000340356 FAM236DA0A1B0GTK5 79 aa11.81□□□□□ -0.52
SOX18-201ENST00000340356 FAM236CP0DP71 79 aa11.81□□□□□ -0.52
SOX18-201ENST00000340356 Q5W150 140 aa11.8□□□□□ -0.52
SOX18-201ENST00000340356 KRTAP13-3Q3SY46 172 aa11.78□□□□□ -0.52
SOX18-201ENST00000340356 ATP5EP56381 51 aaPredicted RBP11.76□□□□□ -0.53
SOX18-201ENST00000340356 C20orf166-AS1Q96NR2 134 aa11.71□□□□□ -0.53
SOX18-201ENST00000340356 RPS28P62857 69 aaKnown RBP11.7□□□□□ -0.54
SOX18-201ENST00000340356 A8MUU9 505 aa11.7□□□□□ -0.54
SOX18-201ENST00000340356 LPAP08519 4548 aa11.68□□□□□ -0.54
SOX18-201ENST00000340356 XP32Q5T750 250 aa11.67□□□□□ -0.54
SOX18-201ENST00000340356 LOC101927531A0A1B0GV80 90 aa11.66□□□□□ -0.54
SOX18-201ENST00000340356 PCOTHQ58A44 107 aa11.66□□□□□ -0.54
SOX18-201ENST00000340356 TPRXLQ17RH7 258 aa11.65□□□□□ -0.54
SOX18-201ENST00000340356 Q75L30 129 aa11.61□□□□□ -0.55
SOX18-201ENST00000340356 SERP1Q9Y6X1 66 aa11.61□□□□□ -0.55
SOX18-201ENST00000340356 HERC1Q15751 4861 aa11.61□□□□□ -0.55
SOX18-201ENST00000340356 CYP4F30PQ9H0H9 118 aa11.59□□□□□ -0.55
SOX18-201ENST00000340356 IGKV2-30P06310 120 aa11.56□□□□□ -0.56
SOX18-201ENST00000340356 RPL37P61927 97 aaKnown RBP11.55□□□□□ -0.56
SOX18-201ENST00000340356 SPANXA2-OT1Q8N9U9 137 aa11.55□□□□□ -0.56
SOX18-201ENST00000340356 LRP2P98164 4655 aa11.52□□□□□ -0.56
SOX18-201ENST00000340356 IGKV2D-30A0A075B6S6 120 aa11.51□□□□□ -0.57
SOX18-201ENST00000340356 ATP11AUNQ6ZP68 121 aa11.46□□□□□ -0.57
SOX18-201ENST00000340356 HMCN2Q8NDA2 5059 aa11.43□□□□□ -0.58
SOX18-201ENST00000340356 HRES1P13985 223 aa11.42□□□□□ -0.58
SOX18-201ENST00000340356 C7orf65Q6ZTY9 151 aa11.41□□□□□ -0.58
SOX18-201ENST00000340356 SMIM26A0A096LP01 95 aa11.34□□□□□ -0.59
SOX18-201ENST00000340356 SPINK7P58062 85 aa11.32□□□□□ -0.6
SOX18-201ENST00000340356 COA5Q86WW8 74 aa11.27□□□□□ -0.61
SOX18-201ENST00000340356 DMAC1Q96GE9 116 aa11.25□□□□□ -0.61
SOX18-201ENST00000340356 SEC61BP60468 96 aaKnown RBP11.23□□□□□ -0.61
SOX18-201ENST00000340356 SVIPQ8NHG7 77 aa11.22□□□□□ -0.61
SOX18-201ENST00000340356 MUC17Q685J3 4493 aa11.2□□□□□ -0.62
SOX18-201ENST00000340356 C4orf26Q17RF5 130 aa11.2□□□□□ -0.62
SOX18-201ENST00000340356 ACYP2P14621 99 aa11.19□□□□□ -0.62
SOX18-201ENST00000340356 KRTAP4-1Q9BYQ7 146 aa11.15□□□□□ -0.63
SOX18-201ENST00000340356 MPLKIPQ8TAP9 179 aa11.11□□□□□ -0.63
SOX18-201ENST00000340356 CHKB-CPT1BH3BT56 60 aa11.06□□□□□ -0.64
SOX18-201ENST00000340356 Q1T7F1 81 aa11.06□□□□□ -0.64
SOX18-201ENST00000340356 A8MUN3 132 aa11.06□□□□□ -0.64
SOX18-201ENST00000340356 KRTAP3-1Q9BYR8 98 aa11.03□□□□□ -0.64
SOX18-201ENST00000340356 V9GYY9 64 aa11.03□□□□□ -0.64
SOX18-201ENST00000340356 COX6B2Q6YFQ2 88 aa11□□□□□ -0.65
SOX18-201ENST00000340356 MUC2Q02817 5179 aa11□□□□□ -0.65
SOX18-201ENST00000340356 UBR4Q5T4S7 5183 aa10.99□□□□□ -0.65
SOX18-201ENST00000340356 RBM12B-AS1Q9P1G2 102 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms