RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 KRTAP13-2Q52LG2 175 aa4.37□□□□□ -1.71
TRIM2-201ENST00000338700 KRTAP13-1Q8IUC0 172 aa4.37□□□□□ -1.71
TRIM2-201ENST00000338700 UBR5O95071 2799 aaPredicted RBP4.37□□□□□ -1.71
TRIM2-201ENST00000338700 NSD1Q96L73 2696 aaPredicted RBP4.36□□□□□ -1.71
TRIM2-201ENST00000338700 DMXL1Q9Y485 3027 aa4.35□□□□□ -1.71
TRIM2-201ENST00000338700 A8MUU9 505 aa4.35□□□□□ -1.71
TRIM2-201ENST00000338700 COL12A1Q99715 3063 aa4.35□□□□□ -1.71
TRIM2-201ENST00000338700 ITPR1Q14643 2758 aa4.34□□□□□ -1.71
TRIM2-201ENST00000338700 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.71
TRIM2-201ENST00000338700 MAP1AP78559 2803 aaPredicted RBP4.34□□□□□ -1.72
TRIM2-201ENST00000338700 ATMQ13315 3056 aa4.34□□□□□ -1.72
TRIM2-201ENST00000338700 NBEAL1Q6ZS30 2694 aa4.33□□□□□ -1.72
TRIM2-201ENST00000338700 CRYBG3Q68DQ2 2970 aa4.33□□□□□ -1.72
TRIM2-201ENST00000338700 NBEAQ8NFP9 2946 aa4.31□□□□□ -1.72
TRIM2-201ENST00000338700 CFAP47Q6ZTR5 3102 aa4.3□□□□□ -1.72
TRIM2-201ENST00000338700 ASPMQ8IZT6 3477 aa4.28□□□□□ -1.72
TRIM2-201ENST00000338700 LRBAP50851 2863 aa4.26□□□□□ -1.73
TRIM2-201ENST00000338700 BOD1L1Q8NFC6 3051 aa4.25□□□□□ -1.73
TRIM2-201ENST00000338700 TACC2O95359 2948 aa4.24□□□□□ -1.73
TRIM2-201ENST00000338700 STAB2Q8WWQ8 2551 aa4.24□□□□□ -1.73
TRIM2-201ENST00000338700 ZFHX4Q86UP3 3567 aa4.23□□□□□ -1.73
TRIM2-201ENST00000338700 FLG2Q5D862 2391 aaPredicted RBP4.23□□□□□ -1.73
TRIM2-201ENST00000338700 DCHS1Q96JQ0 3298 aa4.23□□□□□ -1.73
TRIM2-201ENST00000338700 DMBT1Q9UGM3 2413 aaPredicted RBP4.21□□□□□ -1.74
TRIM2-201ENST00000338700 KALRNO60229 2985 aa4.21□□□□□ -1.74
TRIM2-201ENST00000338700 A0A1B0GVY2 172 aa4.2□□□□□ -1.74
TRIM2-201ENST00000338700 NBEAL2Q6ZNJ1 2754 aa4.2□□□□□ -1.74
TRIM2-201ENST00000338700 ASH1LQ9NR48 2969 aaKnown RBP4.19□□□□□ -1.74
TRIM2-201ENST00000338700 DMDP11532 3685 aa4.19□□□□□ -1.74
TRIM2-201ENST00000338700 ADGRG4Q8IZF6 3080 aa4.18□□□□□ -1.74
TRIM2-201ENST00000338700 ZZEF1O43149 2961 aa4.17□□□□□ -1.74
TRIM2-201ENST00000338700 TNP1P09430 55 aa4.17□□□□□ -1.74
TRIM2-201ENST00000338700 KRTAP1-4P0C5Y4 121 aa4.17□□□□□ -1.74
TRIM2-201ENST00000338700 XP32Q5T750 250 aa4.16□□□□□ -1.74
TRIM2-201ENST00000338700 LAMA5O15230 3695 aa4.15□□□□□ -1.75
TRIM2-201ENST00000338700 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
TRIM2-201ENST00000338700 CELSR2Q9HCU4 2923 aa4.13□□□□□ -1.75
TRIM2-201ENST00000338700 LOC400499M0QZD8 3231 aa4.13□□□□□ -1.75
TRIM2-201ENST00000338700 CSMD1Q96PZ7 3565 aa4.13□□□□□ -1.75
TRIM2-201ENST00000338700 TPRXLQ17RH7 258 aa4.13□□□□□ -1.75
TRIM2-201ENST00000338700 MUC3AQ02505 3323 aa4.11□□□□□ -1.75
TRIM2-201ENST00000338700 ZFHX3Q15911 3703 aa4.11□□□□□ -1.75
TRIM2-201ENST00000338700 HRNRQ86YZ3 2850 aaPredicted RBP4.09□□□□□ -1.75
TRIM2-201ENST00000338700 PDZD2O15018 2839 aa4.09□□□□□ -1.75
TRIM2-201ENST00000338700 NBPF19A0A087WUL8 3843 aa4.09□□□□□ -1.75
TRIM2-201ENST00000338700 NIPBLQ6KC79 2804 aaeCLIP4.09□□□□□ -1.76
TRIM2-201ENST00000338700 RELNP78509 3460 aa4.06□□□□□ -1.76
TRIM2-201ENST00000338700 KRTAP10-8P60410 259 aa4.06□□□□□ -1.76
TRIM2-201ENST00000338700 SMG1Q96Q15 3661 aaKnown RBP4.05□□□□□ -1.76
TRIM2-201ENST00000338700 TENM2Q9NT68 2774 aa4.04□□□□□ -1.76
TRIM2-201ENST00000338700 P0C880 135 aa4.04□□□□□ -1.76
TRIM2-201ENST00000338700 FBN2P35556 2912 aa4.04□□□□□ -1.76
TRIM2-201ENST00000338700 NF1P21359 2839 aa4.03□□□□□ -1.76
TRIM2-201ENST00000338700 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
TRIM2-201ENST00000338700 ZANQ9Y493 2812 aa4.03□□□□□ -1.76
TRIM2-201ENST00000338700 KRTAP13-3Q3SY46 172 aa4.03□□□□□ -1.76
TRIM2-201ENST00000338700 KRTAP10-10P60014 251 aa4.02□□□□□ -1.77
TRIM2-201ENST00000338700 DCHS2Q6V1P9 2916 aa4.02□□□□□ -1.77
TRIM2-201ENST00000338700 MXRA5Q9NR99 2828 aa4.01□□□□□ -1.77
TRIM2-201ENST00000338700 H0YAA0 97 aa4□□□□□ -1.77
TRIM2-201ENST00000338700 SVEP1Q4LDE5 3571 aa4□□□□□ -1.77
TRIM2-201ENST00000338700 PRO2289Q9P1D8 64 aa3.99□□□□□ -1.77
TRIM2-201ENST00000338700 SPENQ96T58 3664 aaKnown RBP3.97□□□□□ -1.77
TRIM2-201ENST00000338700 OTOGQ6ZRI0 2925 aa3.96□□□□□ -1.77
TRIM2-201ENST00000338700 TENM1Q9UKZ4 2725 aa3.96□□□□□ -1.78
TRIM2-201ENST00000338700 ANK3Q12955 4377 aaKnown RBP3.94□□□□□ -1.78
TRIM2-201ENST00000338700 CUBNO60494 3623 aa3.94□□□□□ -1.78
TRIM2-201ENST00000338700 CELSR1Q9NYQ6 3014 aa3.92□□□□□ -1.78
TRIM2-201ENST00000338700 TENM3Q9P273 2699 aa3.88□□□□□ -1.79
TRIM2-201ENST00000338700 FBN1P35555 2871 aaKnown RBP3.86□□□□□ -1.79
TRIM2-201ENST00000338700 PKD1L1Q8TDX9 2849 aa3.8□□□□□ -1.8
TRIM2-201ENST00000338700 KRTAP4-5Q9BYR2 181 aa3.77□□□□□ -1.81
TRIM2-201ENST00000338700 ALMS1Q8TCU4 4167 aa3.77□□□□□ -1.81
TRIM2-201ENST00000338700 CSMD2Q7Z408 3487 aa3.76□□□□□ -1.81
TRIM2-201ENST00000338700 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
TRIM2-201ENST00000338700 VWFP04275 2813 aa3.75□□□□□ -1.81
TRIM2-201ENST00000338700 FBN3Q75N90 2809 aa3.74□□□□□ -1.81
TRIM2-201ENST00000338700 BSNQ9UPA5 3926 aa3.74□□□□□ -1.81
TRIM2-201ENST00000338700 KRTAP12-2P59991 146 aa3.73□□□□□ -1.81
TRIM2-201ENST00000338700 MT1HL1P0DM35 61 aa3.73□□□□□ -1.81
TRIM2-201ENST00000338700 KRTAP13-4Q3LI77 160 aa3.71□□□□□ -1.81
TRIM2-201ENST00000338700 VPS13CQ709C8 3753 aa3.71□□□□□ -1.81
TRIM2-201ENST00000338700 INE1O15225 51 aa3.69□□□□□ -1.82
TRIM2-201ENST00000338700 TGP01266 2768 aa3.68□□□□□ -1.82
TRIM2-201ENST00000338700 HUWE1Q7Z6Z7 4374 aaKnown RBP3.67□□□□□ -1.82
TRIM2-201ENST00000338700 KRTAP12-1P59990 96 aa3.67□□□□□ -1.82
TRIM2-201ENST00000338700 KRTAP3-1Q9BYR8 98 aa3.66□□□□□ -1.82
TRIM2-201ENST00000338700 AKAP9Q99996 3911 aa3.63□□□□□ -1.83
TRIM2-201ENST00000338700 TRRAPQ9Y4A5 3859 aa3.63□□□□□ -1.83
TRIM2-201ENST00000338700 KRTAP10-4P60372 401 aaPredicted RBP3.61□□□□□ -1.83
TRIM2-201ENST00000338700 KRTAP10-6P60371 365 aaPredicted RBP3.55□□□□□ -1.84
TRIM2-201ENST00000338700 DNAH9Q9NYC9 4486 aa3.54□□□□□ -1.84
TRIM2-201ENST00000338700 COL7A1Q02388 2944 aa3.52□□□□□ -1.85
TRIM2-201ENST00000338700 DNAH1Q9P2D7 4330 aa3.51□□□□□ -1.85
TRIM2-201ENST00000338700 CSMD3Q7Z407 3707 aa3.49□□□□□ -1.85
TRIM2-201ENST00000338700 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
TRIM2-201ENST00000338700 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
TRIM2-201ENST00000338700 ZNF469Q96JG9 3925 aaPredicted RBP3.44□□□□□ -1.86
TRIM2-201ENST00000338700 KRTAP3-3Q9BYR6 98 aa3.44□□□□□ -1.86
TRIM2-201ENST00000338700 MEGF8Q7Z7M0 2845 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms