RNA–Protein interactions for RNA: ENST00000337665.8

ARHGEF1-201, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-201ENST00000337665 FAT2Q9NYQ8 4349 aa8.53□□□□□ -1.04
ARHGEF1-201ENST00000337665 KRTAP10-2P60368 255 aa8.53□□□□□ -1.04
ARHGEF1-201ENST00000337665 SPTSSBQ8NFR3 76 aa8.53□□□□□ -1.04
ARHGEF1-201ENST00000337665 SPANXA2-OT1Q8N9U9 137 aa8.52□□□□□ -1.05
ARHGEF1-201ENST00000337665 HYDINQ4G0P3 5121 aa8.51□□□□□ -1.05
ARHGEF1-201ENST00000337665 CIRBP-AS1Q8TBR5 109 aa8.51□□□□□ -1.05
ARHGEF1-201ENST00000337665 TP53AIP1Q9HCN2 124 aa8.5□□□□□ -1.05
ARHGEF1-201ENST00000337665 IGHV6-1A0A0B4J1U7 121 aa8.48□□□□□ -1.05
ARHGEF1-201ENST00000337665 CD164Q04900 197 aa8.47□□□□□ -1.05
ARHGEF1-201ENST00000337665 Q6ZSA8 131 aa8.47□□□□□ -1.05
ARHGEF1-201ENST00000337665 A0A087X002 238 aa8.47□□□□□ -1.05
ARHGEF1-201ENST00000337665 NOTCH2NLQ7Z3S9 236 aa8.47□□□□□ -1.05
ARHGEF1-201ENST00000337665 Q1T7F1 81 aa8.45□□□□□ -1.06
ARHGEF1-201ENST00000337665 SSBP3-AS1Q7Z2R9 100 aa8.45□□□□□ -1.06
ARHGEF1-201ENST00000337665 MRPL34Q9BQ48 92 aaKnown RBP8.44□□□□□ -1.06
ARHGEF1-201ENST00000337665 CDK2AP2O75956 126 aa8.44□□□□□ -1.06
ARHGEF1-201ENST00000337665 LRP1BQ9NZR2 4599 aa8.43□□□□□ -1.06
ARHGEF1-201ENST00000337665 KRTAP10-1P60331 282 aa8.43□□□□□ -1.06
ARHGEF1-201ENST00000337665 KRTAP21-3Q3LHN1 58 aa8.43□□□□□ -1.06
ARHGEF1-201ENST00000337665 A8MUN3 132 aa8.41□□□□□ -1.06
ARHGEF1-201ENST00000337665 IGLV7-46A0A075B6I9 117 aa8.4□□□□□ -1.06
ARHGEF1-201ENST00000337665 KRTAP13-2Q52LG2 175 aa8.38□□□□□ -1.07
ARHGEF1-201ENST00000337665 VPS13BQ7Z7G8 4022 aa8.38□□□□□ -1.07
ARHGEF1-201ENST00000337665 NDUFS5O43920 106 aa8.37□□□□□ -1.07
ARHGEF1-201ENST00000337665 RBM12B-AS1Q9P1G2 102 aa8.37□□□□□ -1.07
ARHGEF1-201ENST00000337665 SPINK6Q6UWN8 80 aa8.36□□□□□ -1.07
ARHGEF1-201ENST00000337665 KRTAP13-3Q3SY46 172 aa8.36□□□□□ -1.07
ARHGEF1-201ENST00000337665 CHKB-CPT1BH3BT56 60 aa8.33□□□□□ -1.08
ARHGEF1-201ENST00000337665 PCOTHQ58A44 107 aa8.33□□□□□ -1.08
ARHGEF1-201ENST00000337665 C4orf48Q5BLP8 95 aa8.33□□□□□ -1.08
ARHGEF1-201ENST00000337665 KRTAP1-4P0C5Y4 121 aa8.32□□□□□ -1.08
ARHGEF1-201ENST00000337665 C8orf87E5RJ46 101 aa8.32□□□□□ -1.08
ARHGEF1-201ENST00000337665 Q5W150 140 aa8.32□□□□□ -1.08
ARHGEF1-201ENST00000337665 Q8N9P0 234 aaPredicted RBP8.3□□□□□ -1.08
ARHGEF1-201ENST00000337665 COA5Q86WW8 74 aa8.29□□□□□ -1.08
ARHGEF1-201ENST00000337665 LOC101927531A0A1B0GV80 90 aa8.27□□□□□ -1.09
ARHGEF1-201ENST00000337665 SACSQ9NZJ4 4579 aa8.25□□□□□ -1.09
ARHGEF1-201ENST00000337665 LINC00313P59037 77 aa8.25□□□□□ -1.09
ARHGEF1-201ENST00000337665 PKHD1P08F94 4074 aa8.25□□□□□ -1.09
ARHGEF1-201ENST00000337665 PRR15LQ9BU68 103 aa8.24□□□□□ -1.09
ARHGEF1-201ENST00000337665 KRTAP16-1A8MUX0 517 aa8.22□□□□□ -1.09
ARHGEF1-201ENST00000337665 A6NED7 52 aa8.22□□□□□ -1.09
ARHGEF1-201ENST00000337665 KTN1-AS1Q86SY8 53 aa8.21□□□□□ -1.09
ARHGEF1-201ENST00000337665 LIMD2Q9BT23 127 aa8.21□□□□□ -1.09
ARHGEF1-201ENST00000337665 Q5VV11 94 aa8.21□□□□□ -1.1
ARHGEF1-201ENST00000337665 H3BS24 57 aa8.2□□□□□ -1.1
ARHGEF1-201ENST00000337665 HRES1P13985 223 aa8.2□□□□□ -1.1
ARHGEF1-201ENST00000337665 PLA2G1BP04054 148 aaKnown RBP8.17□□□□□ -1.1
ARHGEF1-201ENST00000337665 FAM229AH3BQW9 127 aa8.16□□□□□ -1.1
ARHGEF1-201ENST00000337665 TYMSOSQ8TAI1 123 aa8.14□□□□□ -1.11
ARHGEF1-201ENST00000337665 DYNC1H1Q14204 4646 aaKnown RBP8.13□□□□□ -1.11
ARHGEF1-201ENST00000337665 SPINK1P00995 79 aa8.13□□□□□ -1.11
ARHGEF1-201ENST00000337665 IGKV2-30P06310 120 aa8.12□□□□□ -1.11
ARHGEF1-201ENST00000337665 LINC01558Q9Y6Z2 57 aa8.12□□□□□ -1.11
ARHGEF1-201ENST00000337665 PRAC1Q96KF2 57 aa8.12□□□□□ -1.11
ARHGEF1-201ENST00000337665 PKHD1L1Q86WI1 4243 aa8.11□□□□□ -1.11
ARHGEF1-201ENST00000337665 Q75L30 129 aa8.11□□□□□ -1.11
ARHGEF1-201ENST00000337665 LCA10Q71F78 164 aa8.1□□□□□ -1.11
ARHGEF1-201ENST00000337665 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
ARHGEF1-201ENST00000337665 RETNLBQ9BQ08 111 aa8.09□□□□□ -1.11
ARHGEF1-201ENST00000337665 APOBP04114 4563 aaKnown RBP8.08□□□□□ -1.12
ARHGEF1-201ENST00000337665 A0A1B0GVY2 172 aa8.08□□□□□ -1.12
ARHGEF1-201ENST00000337665 RPS29P62273 56 aaKnown RBP8.08□□□□□ -1.12
ARHGEF1-201ENST00000337665 SPAG11AQ6PDA7 123 aa8.08□□□□□ -1.12
ARHGEF1-201ENST00000337665 ACYP2P14621 99 aa8.06□□□□□ -1.12
ARHGEF1-201ENST00000337665 PRR26Q8N8Z3 221 aa8.06□□□□□ -1.12
ARHGEF1-201ENST00000337665 KRTAP10-4P60372 401 aaPredicted RBP8.04□□□□□ -1.12
ARHGEF1-201ENST00000337665 LINC00304Q8N9R0 145 aa8.04□□□□□ -1.12
ARHGEF1-201ENST00000337665 RYR2Q92736 4967 aa8□□□□□ -1.13
ARHGEF1-201ENST00000337665 SMR3BP02814 79 aaPredicted RBP8□□□□□ -1.13
ARHGEF1-201ENST00000337665 ADM2Q7Z4H4 148 aa8□□□□□ -1.13
ARHGEF1-201ENST00000337665 ATP11AUNQ6ZP68 121 aa7.98□□□□□ -1.13
ARHGEF1-201ENST00000337665 C7orf65Q6ZTY9 151 aa7.98□□□□□ -1.13
ARHGEF1-201ENST00000337665 A6NN06 94 aa7.97□□□□□ -1.13
ARHGEF1-201ENST00000337665 FAT1Q14517 4588 aa7.97□□□□□ -1.13
ARHGEF1-201ENST00000337665 IGKV2D-30A0A075B6S6 120 aa7.95□□□□□ -1.14
ARHGEF1-201ENST00000337665 CDC42SE1Q9NRR8 79 aa7.92□□□□□ -1.14
ARHGEF1-201ENST00000337665 SPINK7P58062 85 aa7.91□□□□□ -1.14
ARHGEF1-201ENST00000337665 A8MUU9 505 aa7.87□□□□□ -1.15
ARHGEF1-201ENST00000337665 C20orf166-AS1Q96NR2 134 aa7.87□□□□□ -1.15
ARHGEF1-201ENST00000337665 KMT2CQ8NEZ4 4911 aaKnown RBP7.85□□□□□ -1.15
ARHGEF1-201ENST00000337665 TNXBP22105 4242 aa7.82□□□□□ -1.16
ARHGEF1-201ENST00000337665 C9orf92A6NGG3 77 aa7.81□□□□□ -1.16
ARHGEF1-201ENST00000337665 LINC01554Q52M75 96 aa7.8□□□□□ -1.16
ARHGEF1-201ENST00000337665 A0A1B0GU69 56 aa7.79□□□□□ -1.16
ARHGEF1-201ENST00000337665 Q8N1X5 172 aa7.77□□□□□ -1.17
ARHGEF1-201ENST00000337665 FAT3Q8TDW7 4589 aa7.76□□□□□ -1.17
ARHGEF1-201ENST00000337665 HSPG2P98160 4391 aa7.75□□□□□ -1.17
ARHGEF1-201ENST00000337665 FLG2Q5D862 2391 aaPredicted RBP7.73□□□□□ -1.17
ARHGEF1-201ENST00000337665 KRTAP3-1Q9BYR8 98 aa7.71□□□□□ -1.18
ARHGEF1-201ENST00000337665 KRTAP10-8P60410 259 aa7.7□□□□□ -1.18
ARHGEF1-201ENST00000337665 SPATA8Q6RVD6 105 aa7.7□□□□□ -1.18
ARHGEF1-201ENST00000337665 LRP1Q07954 4544 aaKnown RBP7.69□□□□□ -1.18
ARHGEF1-201ENST00000337665 CSAG1Q6PB30 78 aa7.66□□□□□ -1.18
ARHGEF1-201ENST00000337665 UQCR11O14957 56 aa7.64□□□□□ -1.19
ARHGEF1-201ENST00000337665 RYR3Q15413 4870 aa7.64□□□□□ -1.19
ARHGEF1-201ENST00000337665 RYR1P21817 5038 aa7.63□□□□□ -1.19
ARHGEF1-201ENST00000337665 Q5VSD8 79 aa7.63□□□□□ -1.19
ARHGEF1-201ENST00000337665 MIR22HGQ0VDD5 57 aa7.61□□□□□ -1.19
ARHGEF1-201ENST00000337665 KRTAP17-1Q9BYP8 105 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms