RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 Q75L30 129 aa10.67□□□□□ -0.7
IFFO1-201ENST00000336604 ZNF706Q9Y5V0 76 aaPredicted RBP10.65□□□□□ -0.7
IFFO1-201ENST00000336604 IGLV7-46A0A075B6I9 117 aa10.64□□□□□ -0.71
IFFO1-201ENST00000336604 IGHV6-1A0A0B4J1U7 121 aa10.64□□□□□ -0.71
IFFO1-201ENST00000336604 ASB16-AS1Q495Z4 193 aa10.64□□□□□ -0.71
IFFO1-201ENST00000336604 C8orf17Q9NRJ1 99 aa10.64□□□□□ -0.71
IFFO1-201ENST00000336604 ATP11AUNQ6ZP68 121 aa10.63□□□□□ -0.71
IFFO1-201ENST00000336604 ZNF861PO60384 105 aa10.63□□□□□ -0.71
IFFO1-201ENST00000336604 PLAC8Q9NZF1 115 aa10.63□□□□□ -0.71
IFFO1-201ENST00000336604 LOC101927531A0A1B0GV80 90 aa10.61□□□□□ -0.71
IFFO1-201ENST00000336604 Q6ZR54 194 aa10.61□□□□□ -0.71
IFFO1-201ENST00000336604 RBM12B-AS1Q9P1G2 102 aa10.61□□□□□ -0.71
IFFO1-201ENST00000336604 A0A1B0GVX0 72 aa10.6□□□□□ -0.71
IFFO1-201ENST00000336604 NDUFS5O43920 106 aa10.6□□□□□ -0.71
IFFO1-201ENST00000336604 DNAH6Q9C0G6 4158 aa10.59□□□□□ -0.71
IFFO1-201ENST00000336604 A0A087X002 238 aa10.59□□□□□ -0.71
IFFO1-201ENST00000336604 NOTCH2NLQ7Z3S9 236 aa10.59□□□□□ -0.71
IFFO1-201ENST00000336604 TP53AIP1Q9HCN2 124 aa10.58□□□□□ -0.72
IFFO1-201ENST00000336604 A6NN06 94 aa10.57□□□□□ -0.72
IFFO1-201ENST00000336604 CDK2AP2O75956 126 aa10.56□□□□□ -0.72
IFFO1-201ENST00000336604 CDC42SE1Q9NRR8 79 aa10.56□□□□□ -0.72
IFFO1-201ENST00000336604 DNHD1Q96M86 4753 aa10.56□□□□□ -0.72
IFFO1-201ENST00000336604 DNAH11Q96DT5 4516 aa10.53□□□□□ -0.72
IFFO1-201ENST00000336604 ALMS1Q8TCU4 4167 aa10.53□□□□□ -0.72
IFFO1-201ENST00000336604 SPINK7P58062 85 aa10.52□□□□□ -0.73
IFFO1-201ENST00000336604 SPINK6Q6UWN8 80 aa10.52□□□□□ -0.73
IFFO1-201ENST00000336604 MRPL34Q9BQ48 92 aaKnown RBP10.52□□□□□ -0.73
IFFO1-201ENST00000336604 C1orf134Q5TEV5 83 aa10.51□□□□□ -0.73
IFFO1-201ENST00000336604 LINC01558Q9Y6Z2 57 aa10.51□□□□□ -0.73
IFFO1-201ENST00000336604 IGLV7-43P04211 117 aa10.5□□□□□ -0.73
IFFO1-201ENST00000336604 HRES1P13985 223 aa10.49□□□□□ -0.73
IFFO1-201ENST00000336604 CIRBP-AS1Q8TBR5 109 aa10.49□□□□□ -0.73
IFFO1-201ENST00000336604 DNAH5Q8TE73 4624 aa10.48□□□□□ -0.73
IFFO1-201ENST00000336604 LY6G6CO95867 125 aa10.45□□□□□ -0.74
IFFO1-201ENST00000336604 C7orf65Q6ZTY9 151 aa10.43□□□□□ -0.74
IFFO1-201ENST00000336604 PRR26Q8N8Z3 221 aa10.41□□□□□ -0.74
IFFO1-201ENST00000336604 Q5W150 140 aa10.41□□□□□ -0.74
IFFO1-201ENST00000336604 KRTAP10-2P60368 255 aa10.4□□□□□ -0.74
IFFO1-201ENST00000336604 LRP1BQ9NZR2 4599 aa10.39□□□□□ -0.75
IFFO1-201ENST00000336604 KRTAP13-3Q3SY46 172 aa10.33□□□□□ -0.76
IFFO1-201ENST00000336604 SSBP3-AS1Q7Z2R9 100 aa10.33□□□□□ -0.76
IFFO1-201ENST00000336604 HYDINQ4G0P3 5121 aa10.33□□□□□ -0.76
IFFO1-201ENST00000336604 PKD1P98161 4303 aa10.3□□□□□ -0.76
IFFO1-201ENST00000336604 PRAC1Q96KF2 57 aa10.29□□□□□ -0.76
IFFO1-201ENST00000336604 KRTAP13-2Q52LG2 175 aa10.29□□□□□ -0.76
IFFO1-201ENST00000336604 FAT2Q9NYQ8 4349 aa10.27□□□□□ -0.76
IFFO1-201ENST00000336604 LINC00313P59037 77 aa10.26□□□□□ -0.77
IFFO1-201ENST00000336604 C8orf87E5RJ46 101 aa10.25□□□□□ -0.77
IFFO1-201ENST00000336604 VPS13BQ7Z7G8 4022 aa10.25□□□□□ -0.77
IFFO1-201ENST00000336604 KRTAP10-1P60331 282 aa10.24□□□□□ -0.77
IFFO1-201ENST00000336604 RETNLBQ9BQ08 111 aa10.24□□□□□ -0.77
IFFO1-201ENST00000336604 ADM2Q7Z4H4 148 aa10.23□□□□□ -0.77
IFFO1-201ENST00000336604 Q6ZSA8 131 aa10.21□□□□□ -0.77
IFFO1-201ENST00000336604 ACYP2P14621 99 aa10.19□□□□□ -0.78
IFFO1-201ENST00000336604 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
IFFO1-201ENST00000336604 FAM229AH3BQW9 127 aa10.15□□□□□ -0.78
IFFO1-201ENST00000336604 A0A1B0GU69 56 aa10.13□□□□□ -0.79
IFFO1-201ENST00000336604 KRTAP16-1A8MUX0 517 aa10.11□□□□□ -0.79
IFFO1-201ENST00000336604 PKHD1P08F94 4074 aa10.1□□□□□ -0.79
IFFO1-201ENST00000336604 DMAC1Q96GE9 116 aa10.1□□□□□ -0.79
IFFO1-201ENST00000336604 IGKV2-30P06310 120 aa10.09□□□□□ -0.79
IFFO1-201ENST00000336604 PLA2G1BP04054 148 aaKnown RBP10.06□□□□□ -0.8
IFFO1-201ENST00000336604 IGKV2D-30A0A075B6S6 120 aa10.02□□□□□ -0.81
IFFO1-201ENST00000336604 TYMSOSQ8TAI1 123 aa10.01□□□□□ -0.81
IFFO1-201ENST00000336604 C4orf48Q5BLP8 95 aa10.01□□□□□ -0.81
IFFO1-201ENST00000336604 MIR22HGQ0VDD5 57 aa10□□□□□ -0.81
IFFO1-201ENST00000336604 SPATA8Q6RVD6 105 aa10□□□□□ -0.81
IFFO1-201ENST00000336604 LINC01554Q52M75 96 aa9.99□□□□□ -0.81
IFFO1-201ENST00000336604 UQCR11O14957 56 aa9.96□□□□□ -0.81
IFFO1-201ENST00000336604 SPINK1P00995 79 aa9.95□□□□□ -0.82
IFFO1-201ENST00000336604 SACSQ9NZJ4 4579 aa9.93□□□□□ -0.82
IFFO1-201ENST00000336604 CSAG1Q6PB30 78 aa9.88□□□□□ -0.83
IFFO1-201ENST00000336604 FAT1Q14517 4588 aa9.87□□□□□ -0.83
IFFO1-201ENST00000336604 DYNC1H1Q14204 4646 aaKnown RBP9.87□□□□□ -0.83
IFFO1-201ENST00000336604 LINC00304Q8N9R0 145 aa9.86□□□□□ -0.83
IFFO1-201ENST00000336604 SMR3BP02814 79 aaPredicted RBP9.85□□□□□ -0.83
IFFO1-201ENST00000336604 Q8N1X5 172 aa9.79□□□□□ -0.84
IFFO1-201ENST00000336604 RPS29P62273 56 aaKnown RBP9.76□□□□□ -0.85
IFFO1-201ENST00000336604 C9orf92A6NGG3 77 aa9.75□□□□□ -0.85
IFFO1-201ENST00000336604 H3BS24 57 aa9.74□□□□□ -0.85
IFFO1-201ENST00000336604 APOBP04114 4563 aaKnown RBP9.74□□□□□ -0.85
IFFO1-201ENST00000336604 PKHD1L1Q86WI1 4243 aa9.71□□□□□ -0.85
IFFO1-201ENST00000336604 KRTAP10-4P60372 401 aaPredicted RBP9.65□□□□□ -0.87
IFFO1-201ENST00000336604 C20orf166-AS1Q96NR2 134 aa9.63□□□□□ -0.87
IFFO1-201ENST00000336604 A8MUU9 505 aa9.62□□□□□ -0.87
IFFO1-201ENST00000336604 A0A1B0GVY2 172 aa9.61□□□□□ -0.87
IFFO1-201ENST00000336604 H0YAA0 97 aa9.58□□□□□ -0.88
IFFO1-201ENST00000336604 FLG2Q5D862 2391 aaPredicted RBP9.56□□□□□ -0.88
IFFO1-201ENST00000336604 KRTAP3-1Q9BYR8 98 aa9.56□□□□□ -0.88
IFFO1-201ENST00000336604 RYR2Q92736 4967 aa9.56□□□□□ -0.88
IFFO1-201ENST00000336604 KMT2CQ8NEZ4 4911 aaKnown RBP9.55□□□□□ -0.88
IFFO1-201ENST00000336604 KRTAP21-3Q3LHN1 58 aa9.54□□□□□ -0.88
IFFO1-201ENST00000336604 LRP1Q07954 4544 aaKnown RBP9.5□□□□□ -0.89
IFFO1-201ENST00000336604 KRTAP25-1Q3LHN0 102 aa9.47□□□□□ -0.89
IFFO1-201ENST00000336604 CRIPTQ9P021 101 aa9.46□□□□□ -0.89
IFFO1-201ENST00000336604 A0A1B0GU33 70 aa9.45□□□□□ -0.9
IFFO1-201ENST00000336604 FAT3Q8TDW7 4589 aa9.44□□□□□ -0.9
IFFO1-201ENST00000336604 TNXBP22105 4242 aa9.41□□□□□ -0.9
IFFO1-201ENST00000336604 HSPG2P98160 4391 aa9.38□□□□□ -0.91
IFFO1-201ENST00000336604 ROMO1P60602 79 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms