RNA–Protein interactions for RNA: ENST00000334121.10

SREK1-202, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SREK1, Length 6,781 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-202ENST00000334121 NSD1Q96L73 2696 aaPredicted RBP6.38□□□□□ -1.39
SREK1-202ENST00000334121 A0A1B0GVY2 172 aa6.37□□□□□ -1.39
SREK1-202ENST00000334121 APCP25054 2843 aa6.37□□□□□ -1.39
SREK1-202ENST00000334121 ASPMQ8IZT6 3477 aa6.35□□□□□ -1.39
SREK1-202ENST00000334121 HIVEP1P15822 2718 aa6.35□□□□□ -1.39
SREK1-202ENST00000334121 UTP20O75691 2785 aaKnown RBP6.33□□□□□ -1.4
SREK1-202ENST00000334121 IGSF10Q6WRI0 2623 aa6.33□□□□□ -1.4
SREK1-202ENST00000334121 WDFY3Q8IZQ1 3526 aa6.32□□□□□ -1.4
SREK1-202ENST00000334121 ZZEF1O43149 2961 aa6.3□□□□□ -1.4
SREK1-202ENST00000334121 KRTAP4-16G5E9R7 235 aaPredicted RBP6.3□□□□□ -1.4
SREK1-202ENST00000334121 NBEAQ8NFP9 2946 aa6.27□□□□□ -1.41
SREK1-202ENST00000334121 KRTAP13-2Q52LG2 175 aa6.26□□□□□ -1.41
SREK1-202ENST00000334121 ITPR1Q14643 2758 aa6.26□□□□□ -1.41
SREK1-202ENST00000334121 LOC400499M0QZD8 3231 aa6.24□□□□□ -1.41
SREK1-202ENST00000334121 Q6ZRN7 208 aaPredicted RBP6.23□□□□□ -1.41
SREK1-202ENST00000334121 KRTAP29-1A8MX34 341 aaPredicted RBP6.22□□□□□ -1.41
SREK1-202ENST00000334121 KRTAP7-1Q8IUC3 87 aa6.22□□□□□ -1.41
SREK1-202ENST00000334121 CELSR2Q9HCU4 2923 aa6.21□□□□□ -1.42
SREK1-202ENST00000334121 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.42
SREK1-202ENST00000334121 KRTAP10-8P60410 259 aa6.2□□□□□ -1.42
SREK1-202ENST00000334121 TNRC18O15417 2968 aaPredicted RBP6.18□□□□□ -1.42
SREK1-202ENST00000334121 DCHS1Q96JQ0 3298 aa6.14□□□□□ -1.43
SREK1-202ENST00000334121 DMXL1Q9Y485 3027 aa6.12□□□□□ -1.43
SREK1-202ENST00000334121 TNP1P09430 55 aa6.12□□□□□ -1.43
SREK1-202ENST00000334121 FLNCQ14315 2725 aa6.12□□□□□ -1.43
SREK1-202ENST00000334121 NDUFAF8A1L188 74 aa6.1□□□□□ -1.43
SREK1-202ENST00000334121 TENM4Q6N022 2769 aa6.09□□□□□ -1.43
SREK1-202ENST00000334121 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.43
SREK1-202ENST00000334121 DCHS2Q6V1P9 2916 aa6.07□□□□□ -1.44
SREK1-202ENST00000334121 NBPF19A0A087WUL8 3843 aa6.07□□□□□ -1.44
SREK1-202ENST00000334121 KRTAP16-1A8MUX0 517 aa6.05□□□□□ -1.44
SREK1-202ENST00000334121 KRTAP10-10P60014 251 aa6.05□□□□□ -1.44
SREK1-202ENST00000334121 LAMA5O15230 3695 aa6.04□□□□□ -1.44
SREK1-202ENST00000334121 RPS29P62273 56 aaKnown RBP6.03□□□□□ -1.44
SREK1-202ENST00000334121 ASB16-AS1Q495Z4 193 aa6.03□□□□□ -1.44
SREK1-202ENST00000334121 RELNP78509 3460 aa6.03□□□□□ -1.44
SREK1-202ENST00000334121 ZFHX4Q86UP3 3567 aa6.02□□□□□ -1.45
SREK1-202ENST00000334121 KRTAP13-1Q8IUC0 172 aa6.01□□□□□ -1.45
SREK1-202ENST00000334121 CELSR1Q9NYQ6 3014 aa6□□□□□ -1.45
SREK1-202ENST00000334121 TENM1Q9UKZ4 2725 aa5.99□□□□□ -1.45
SREK1-202ENST00000334121 XP32Q5T750 250 aa5.98□□□□□ -1.45
SREK1-202ENST00000334121 CSMD1Q96PZ7 3565 aa5.97□□□□□ -1.45
SREK1-202ENST00000334121 A6NN06 94 aa5.93□□□□□ -1.46
SREK1-202ENST00000334121 NF1P21359 2839 aa5.93□□□□□ -1.46
SREK1-202ENST00000334121 FBN2P35556 2912 aa5.92□□□□□ -1.46
SREK1-202ENST00000334121 NIPBLQ6KC79 2804 aaeCLIP5.89□□□□□ -1.472e-7■■■□□ 16.7
SREK1-202ENST00000334121 PKD1L1Q8TDX9 2849 aa5.89□□□□□ -1.47
SREK1-202ENST00000334121 TENM2Q9NT68 2774 aa5.88□□□□□ -1.47
SREK1-202ENST00000334121 ZANQ9Y493 2812 aa5.88□□□□□ -1.47
SREK1-202ENST00000334121 VWFP04275 2813 aa5.85□□□□□ -1.47
SREK1-202ENST00000334121 KRTAP1-4P0C5Y4 121 aa5.85□□□□□ -1.47
SREK1-202ENST00000334121 CUBNO60494 3623 aa5.82□□□□□ -1.48
SREK1-202ENST00000334121 KRTAP21-3Q3LHN1 58 aa5.81□□□□□ -1.48
SREK1-202ENST00000334121 ZFHX3Q15911 3703 aa5.79□□□□□ -1.48
SREK1-202ENST00000334121 TENM3Q9P273 2699 aa5.77□□□□□ -1.49
SREK1-202ENST00000334121 P0C880 135 aa5.77□□□□□ -1.49
SREK1-202ENST00000334121 H0YAA0 97 aa5.76□□□□□ -1.49
SREK1-202ENST00000334121 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
SREK1-202ENST00000334121 TPRXLQ17RH7 258 aa5.74□□□□□ -1.49
SREK1-202ENST00000334121 DMDP11532 3685 aa5.73□□□□□ -1.49
SREK1-202ENST00000334121 SMG1Q96Q15 3661 aaKnown RBP5.73□□□□□ -1.49
SREK1-202ENST00000334121 HRNRQ86YZ3 2850 aaPredicted RBP5.72□□□□□ -1.49
SREK1-202ENST00000334121 SPENQ96T58 3664 aaKnown RBP5.71□□□□□ -1.5
SREK1-202ENST00000334121 SVEP1Q4LDE5 3571 aa5.69□□□□□ -1.5
SREK1-202ENST00000334121 KRTAP13-3Q3SY46 172 aa5.68□□□□□ -1.5
SREK1-202ENST00000334121 TGP01266 2768 aa5.68□□□□□ -1.5
SREK1-202ENST00000334121 PDZD2O15018 2839 aa5.68□□□□□ -1.5
SREK1-202ENST00000334121 PP632Q6XCG6 107 aa5.64□□□□□ -1.51
SREK1-202ENST00000334121 CSMD2Q7Z408 3487 aa5.62□□□□□ -1.51
SREK1-202ENST00000334121 MXRA5Q9NR99 2828 aa5.6□□□□□ -1.51
SREK1-202ENST00000334121 KRTAP12-2P59991 146 aa5.53□□□□□ -1.52
SREK1-202ENST00000334121 SRRM2Q9UQ35 2752 aaKnown RBP5.51□□□□□ -1.53
SREK1-202ENST00000334121 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
SREK1-202ENST00000334121 MUC3AQ02505 3323 aa5.49□□□□□ -1.53
SREK1-202ENST00000334121 FBN1P35555 2871 aaKnown RBP5.44□□□□□ -1.54
SREK1-202ENST00000334121 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
SREK1-202ENST00000334121 TRRAPQ9Y4A5 3859 aa5.35□□□□□ -1.55
SREK1-202ENST00000334121 COL7A1Q02388 2944 aa5.35□□□□□ -1.55
SREK1-202ENST00000334121 MEGF8Q7Z7M0 2845 aa5.31□□□□□ -1.56
SREK1-202ENST00000334121 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
SREK1-202ENST00000334121 CSMD3Q7Z407 3707 aa5.29□□□□□ -1.56
SREK1-202ENST00000334121 KRTAP13-4Q3LI77 160 aa5.29□□□□□ -1.56
SREK1-202ENST00000334121 FBN3Q75N90 2809 aa5.27□□□□□ -1.57
SREK1-202ENST00000334121 VPS13CQ709C8 3753 aa5.26□□□□□ -1.57
SREK1-202ENST00000334121 KRTAP3-1Q9BYR8 98 aa5.22□□□□□ -1.57
SREK1-202ENST00000334121 KRTAP4-5Q9BYR2 181 aa5.2□□□□□ -1.58
SREK1-202ENST00000334121 ANK3Q12955 4377 aaKnown RBP5.19□□□□□ -1.58
SREK1-202ENST00000334121 BSNQ9UPA5 3926 aa5.14□□□□□ -1.59
SREK1-202ENST00000334121 OTOGQ6ZRI0 2925 aa5.13□□□□□ -1.59
SREK1-202ENST00000334121 KRTAP10-12P60413 245 aa5.04□□□□□ -1.6
SREK1-202ENST00000334121 MT1HL1P0DM35 61 aa5.02□□□□□ -1.61
SREK1-202ENST00000334121 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
SREK1-202ENST00000334121 HUWE1Q7Z6Z7 4374 aaKnown RBP5.01□□□□□ -1.61
SREK1-202ENST00000334121 LORP23490 312 aaPredicted RBP4.98□□□□□ -1.61
SREK1-202ENST00000334121 LCE3AQ5TA76 89 aa4.87□□□□□ -1.63
SREK1-202ENST00000334121 ZNF469Q96JG9 3925 aaPredicted RBP4.86□□□□□ -1.63
SREK1-202ENST00000334121 KRTAP3-3Q9BYR6 98 aa4.85□□□□□ -1.63
SREK1-202ENST00000334121 KRTAP12-3P60328 96 aa4.84□□□□□ -1.63
SREK1-202ENST00000334121 KRTAP10-5P60370 271 aa4.84□□□□□ -1.63
SREK1-202ENST00000334121 AKAP9Q99996 3911 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms