RNA–Protein interactions for RNA: ENST00000330636.8

LYRM4-201, Transcript of LYR motif containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LYRM4, Length 7,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-201ENST00000330636 COL6A5A8TX70 2615 aa5.13□□□□□ -1.59
LYRM4-201ENST00000330636 KRTAP29-1A8MX34 341 aaPredicted RBP5.12□□□□□ -1.59
LYRM4-201ENST00000330636 SPRR1AP35321 89 aa5.12□□□□□ -1.59
LYRM4-201ENST00000330636 UTP20O75691 2785 aaKnown RBP5.11□□□□□ -1.59
LYRM4-201ENST00000330636 ZFHX4Q86UP3 3567 aa5.1□□□□□ -1.59
LYRM4-201ENST00000330636 ITPR2Q14571 2701 aa5.08□□□□□ -1.6
LYRM4-201ENST00000330636 STAB1Q9NY15 2570 aa5.08□□□□□ -1.6
LYRM4-201ENST00000330636 A0A087X002 238 aa5.08□□□□□ -1.6
LYRM4-201ENST00000330636 NOTCH2NLQ7Z3S9 236 aa5.08□□□□□ -1.6
LYRM4-201ENST00000330636 UBR5O95071 2799 aaPredicted RBP5.06□□□□□ -1.6
LYRM4-201ENST00000330636 SPRR1BP22528 89 aa5.05□□□□□ -1.6
LYRM4-201ENST00000330636 ITPR1Q14643 2758 aa5.04□□□□□ -1.6
LYRM4-201ENST00000330636 NOTCH1P46531 2555 aa5.02□□□□□ -1.61
LYRM4-201ENST00000330636 CELSR2Q9HCU4 2923 aa5.02□□□□□ -1.61
LYRM4-201ENST00000330636 SMG1Q96Q15 3661 aaKnown RBP5.02□□□□□ -1.61
LYRM4-201ENST00000330636 TNP1P09430 55 aa5.02□□□□□ -1.61
LYRM4-201ENST00000330636 PLAC8Q9NZF1 115 aa5.01□□□□□ -1.61
LYRM4-201ENST00000330636 NBEAL1Q6ZS30 2694 aa5.01□□□□□ -1.61
LYRM4-201ENST00000330636 PP632Q6XCG6 107 aa5□□□□□ -1.61
LYRM4-201ENST00000330636 LCE6AA0A183 80 aa4.99□□□□□ -1.61
LYRM4-201ENST00000330636 KRTAP10-8P60410 259 aa4.98□□□□□ -1.61
LYRM4-201ENST00000330636 P0C880 135 aa4.98□□□□□ -1.61
LYRM4-201ENST00000330636 APCP25054 2843 aa4.97□□□□□ -1.61
LYRM4-201ENST00000330636 ZANQ9Y493 2812 aa4.97□□□□□ -1.61
LYRM4-201ENST00000330636 HIVEP1P15822 2718 aa4.97□□□□□ -1.61
LYRM4-201ENST00000330636 NBEAL2Q6ZNJ1 2754 aa4.96□□□□□ -1.62
LYRM4-201ENST00000330636 DCHS2Q6V1P9 2916 aa4.95□□□□□ -1.62
LYRM4-201ENST00000330636 ASH1LQ9NR48 2969 aaKnown RBP4.95□□□□□ -1.62
LYRM4-201ENST00000330636 Q5VSD8 79 aa4.93□□□□□ -1.62
LYRM4-201ENST00000330636 DMBT1Q9UGM3 2413 aaPredicted RBP4.93□□□□□ -1.62
LYRM4-201ENST00000330636 NBPF19A0A087WUL8 3843 aa4.93□□□□□ -1.62
LYRM4-201ENST00000330636 NIPBLQ6KC79 2804 aaeCLIP4.92□□□□□ -1.62
LYRM4-201ENST00000330636 H0YAA0 97 aa4.89□□□□□ -1.63
LYRM4-201ENST00000330636 HRNRQ86YZ3 2850 aaPredicted RBP4.87□□□□□ -1.63
LYRM4-201ENST00000330636 NSD1Q96L73 2696 aaPredicted RBP4.86□□□□□ -1.63
LYRM4-201ENST00000330636 FBN2P35556 2912 aa4.85□□□□□ -1.63
LYRM4-201ENST00000330636 ZFHX3Q15911 3703 aa4.84□□□□□ -1.63
LYRM4-201ENST00000330636 CSMD1Q96PZ7 3565 aa4.84□□□□□ -1.64
LYRM4-201ENST00000330636 NF1P21359 2839 aa4.83□□□□□ -1.64
LYRM4-201ENST00000330636 TENM4Q6N022 2769 aa4.83□□□□□ -1.64
LYRM4-201ENST00000330636 SVEP1Q4LDE5 3571 aa4.83□□□□□ -1.64
LYRM4-201ENST00000330636 CSMD2Q7Z408 3487 aa4.82□□□□□ -1.64
LYRM4-201ENST00000330636 KRTAP1-5Q9BYS1 174 aa4.8□□□□□ -1.64
LYRM4-201ENST00000330636 SPENQ96T58 3664 aaKnown RBP4.8□□□□□ -1.64
LYRM4-201ENST00000330636 KRTAP10-1P60331 282 aa4.78□□□□□ -1.64
LYRM4-201ENST00000330636 CELSR1Q9NYQ6 3014 aa4.78□□□□□ -1.64
LYRM4-201ENST00000330636 CUBNO60494 3623 aa4.78□□□□□ -1.64
LYRM4-201ENST00000330636 KMT2BQ9UMN6 2715 aaPredicted RBP4.77□□□□□ -1.65
LYRM4-201ENST00000330636 KRTAP10-2P60368 255 aa4.76□□□□□ -1.65
LYRM4-201ENST00000330636 BSNQ9UPA5 3926 aa4.7□□□□□ -1.66
LYRM4-201ENST00000330636 STAB2Q8WWQ8 2551 aa4.7□□□□□ -1.66
LYRM4-201ENST00000330636 MXRA5Q9NR99 2828 aa4.68□□□□□ -1.66
LYRM4-201ENST00000330636 KRTAP7-1Q8IUC3 87 aa4.64□□□□□ -1.67
LYRM4-201ENST00000330636 A0A1B0GVY2 172 aa4.62□□□□□ -1.67
LYRM4-201ENST00000330636 OTOGQ6ZRI0 2925 aa4.62□□□□□ -1.67
LYRM4-201ENST00000330636 KRTAP13-2Q52LG2 175 aa4.62□□□□□ -1.67
LYRM4-201ENST00000330636 Q6ZRN7 208 aaPredicted RBP4.61□□□□□ -1.67
LYRM4-201ENST00000330636 PDZD2O15018 2839 aa4.61□□□□□ -1.67
LYRM4-201ENST00000330636 RPS29P62273 56 aaKnown RBP4.6□□□□□ -1.67
LYRM4-201ENST00000330636 FBN1P35555 2871 aaKnown RBP4.59□□□□□ -1.67
LYRM4-201ENST00000330636 TPRXLQ17RH7 258 aa4.59□□□□□ -1.68
LYRM4-201ENST00000330636 PKD1L1Q8TDX9 2849 aa4.58□□□□□ -1.68
LYRM4-201ENST00000330636 KRTAP12-2P59991 146 aa4.58□□□□□ -1.68
LYRM4-201ENST00000330636 VPS13CQ709C8 3753 aa4.54□□□□□ -1.68
LYRM4-201ENST00000330636 TENM1Q9UKZ4 2725 aa4.53□□□□□ -1.68
LYRM4-201ENST00000330636 KRTAP13-1Q8IUC0 172 aa4.52□□□□□ -1.69
LYRM4-201ENST00000330636 INE1O15225 51 aa4.5□□□□□ -1.69
LYRM4-201ENST00000330636 TENM2Q9NT68 2774 aa4.49□□□□□ -1.69
LYRM4-201ENST00000330636 VWFP04275 2813 aa4.46□□□□□ -1.7
LYRM4-201ENST00000330636 TRRAPQ9Y4A5 3859 aa4.45□□□□□ -1.7
LYRM4-201ENST00000330636 KRTAP21-3Q3LHN1 58 aa4.45□□□□□ -1.7
LYRM4-201ENST00000330636 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
LYRM4-201ENST00000330636 TGP01266 2768 aa4.43□□□□□ -1.7
LYRM4-201ENST00000330636 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
LYRM4-201ENST00000330636 TENM3Q9P273 2699 aa4.42□□□□□ -1.7
LYRM4-201ENST00000330636 ZNF469Q96JG9 3925 aaPredicted RBP4.41□□□□□ -1.7
LYRM4-201ENST00000330636 KRTAP13-4Q3LI77 160 aa4.41□□□□□ -1.7
LYRM4-201ENST00000330636 PRO2289Q9P1D8 64 aa4.4□□□□□ -1.7
LYRM4-201ENST00000330636 ANK3Q12955 4377 aaKnown RBP4.39□□□□□ -1.71
LYRM4-201ENST00000330636 KRTAP10-10P60014 251 aa4.38□□□□□ -1.71
LYRM4-201ENST00000330636 XP32Q5T750 250 aa4.37□□□□□ -1.71
LYRM4-201ENST00000330636 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
LYRM4-201ENST00000330636 AKAP9Q99996 3911 aa4.26□□□□□ -1.73
LYRM4-201ENST00000330636 SRRM2Q9UQ35 2752 aaKnown RBP4.23□□□□□ -1.73
LYRM4-201ENST00000330636 KRTAP13-3Q3SY46 172 aa4.21□□□□□ -1.74
LYRM4-201ENST00000330636 KRTAP1-4P0C5Y4 121 aa4.21□□□□□ -1.74
LYRM4-201ENST00000330636 COL7A1Q02388 2944 aa4.2□□□□□ -1.74
LYRM4-201ENST00000330636 CRCT1Q9UGL9 99 aa4.19□□□□□ -1.74
LYRM4-201ENST00000330636 CSMD3Q7Z407 3707 aa4.11□□□□□ -1.75
LYRM4-201ENST00000330636 FBN3Q75N90 2809 aa4.11□□□□□ -1.75
LYRM4-201ENST00000330636 KRTAP3-1Q9BYR8 98 aa4.06□□□□□ -1.76
LYRM4-201ENST00000330636 KRTAP10-6P60371 365 aaPredicted RBP4.03□□□□□ -1.76
LYRM4-201ENST00000330636 HUWE1Q7Z6Z7 4374 aaKnown RBP4.03□□□□□ -1.76
LYRM4-201ENST00000330636 MEGF8Q7Z7M0 2845 aa3.98□□□□□ -1.77
LYRM4-201ENST00000330636 KRTAP10-5P60370 271 aa3.95□□□□□ -1.78
LYRM4-201ENST00000330636 DNHD1Q96M86 4753 aa3.92□□□□□ -1.78
LYRM4-201ENST00000330636 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
LYRM4-201ENST00000330636 DNAH9Q9NYC9 4486 aa3.9□□□□□ -1.79
LYRM4-201ENST00000330636 KRTAP4-5Q9BYR2 181 aa3.87□□□□□ -1.79
LYRM4-201ENST00000330636 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms