RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 NBEAQ8NFP9 2946 aa8.46□□□□□ -1.05
PTPN21-201ENST00000328736 COL6A5A8TX70 2615 aa8.45□□□□□ -1.06
PTPN21-201ENST00000328736 KRTAP21-3Q3LHN1 58 aa8.45□□□□□ -1.06
PTPN21-201ENST00000328736 ADGRG4Q8IZF6 3080 aa8.45□□□□□ -1.06
PTPN21-201ENST00000328736 NDUFAF8A1L188 74 aa8.44□□□□□ -1.06
PTPN21-201ENST00000328736 DMBT1Q9UGM3 2413 aaPredicted RBP8.44□□□□□ -1.06
PTPN21-201ENST00000328736 NOTCH1P46531 2555 aa8.42□□□□□ -1.06
PTPN21-201ENST00000328736 PP632Q6XCG6 107 aa8.41□□□□□ -1.06
PTPN21-201ENST00000328736 COL12A1Q99715 3063 aa8.39□□□□□ -1.07
PTPN21-201ENST00000328736 TACC2O95359 2948 aa8.39□□□□□ -1.07
PTPN21-201ENST00000328736 DMXL2Q8TDJ6 3036 aa8.38□□□□□ -1.07
PTPN21-201ENST00000328736 UBR5O95071 2799 aaPredicted RBP8.36□□□□□ -1.07
PTPN21-201ENST00000328736 ITPR2Q14571 2701 aa8.36□□□□□ -1.07
PTPN21-201ENST00000328736 KRTAP10-8P60410 259 aa8.35□□□□□ -1.07
PTPN21-201ENST00000328736 ITPR1Q14643 2758 aa8.31□□□□□ -1.08
PTPN21-201ENST00000328736 UTP20O75691 2785 aaKnown RBP8.3□□□□□ -1.08
PTPN21-201ENST00000328736 BAHCC1Q9P281 2608 aa8.3□□□□□ -1.08
PTPN21-201ENST00000328736 CRYBG3Q68DQ2 2970 aa8.29□□□□□ -1.08
PTPN21-201ENST00000328736 ASH1LQ9NR48 2969 aaKnown RBP8.28□□□□□ -1.08
PTPN21-201ENST00000328736 ZZEF1O43149 2961 aa8.26□□□□□ -1.09
PTPN21-201ENST00000328736 XP32Q5T750 250 aa8.26□□□□□ -1.09
PTPN21-201ENST00000328736 TNRC18O15417 2968 aaPredicted RBP8.26□□□□□ -1.09
PTPN21-201ENST00000328736 WDFY3Q8IZQ1 3526 aa8.24□□□□□ -1.09
PTPN21-201ENST00000328736 HIVEP1P15822 2718 aa8.23□□□□□ -1.09
PTPN21-201ENST00000328736 A0A1B0GVY2 172 aa8.23□□□□□ -1.09
PTPN21-201ENST00000328736 ASPMQ8IZT6 3477 aa8.22□□□□□ -1.09
PTPN21-201ENST00000328736 APCP25054 2843 aa8.22□□□□□ -1.09
PTPN21-201ENST00000328736 NSD1Q96L73 2696 aaPredicted RBP8.21□□□□□ -1.1
PTPN21-201ENST00000328736 PRO2289Q9P1D8 64 aa8.2□□□□□ -1.1
PTPN21-201ENST00000328736 DMXL1Q9Y485 3027 aa8.19□□□□□ -1.1
PTPN21-201ENST00000328736 LOC400499M0QZD8 3231 aa8.17□□□□□ -1.1
PTPN21-201ENST00000328736 TPRXLQ17RH7 258 aa8.16□□□□□ -1.1
PTPN21-201ENST00000328736 FLNCQ14315 2725 aa8.14□□□□□ -1.11
PTPN21-201ENST00000328736 STAB2Q8WWQ8 2551 aa8.14□□□□□ -1.11
PTPN21-201ENST00000328736 KRTAP1-4P0C5Y4 121 aa8.13□□□□□ -1.11
PTPN21-201ENST00000328736 KRTAP10-10P60014 251 aa8.13□□□□□ -1.11
PTPN21-201ENST00000328736 ZFHX4Q86UP3 3567 aa8.1□□□□□ -1.11
PTPN21-201ENST00000328736 P0C880 135 aa8.05□□□□□ -1.12
PTPN21-201ENST00000328736 KMT2BQ9UMN6 2715 aaPredicted RBP8.05□□□□□ -1.12
PTPN21-201ENST00000328736 HRNRQ86YZ3 2850 aaPredicted RBP8.04□□□□□ -1.12
PTPN21-201ENST00000328736 DCHS1Q96JQ0 3298 aa8.03□□□□□ -1.12
PTPN21-201ENST00000328736 H0YAA0 97 aa8.02□□□□□ -1.13
PTPN21-201ENST00000328736 RELNP78509 3460 aa8.02□□□□□ -1.13
PTPN21-201ENST00000328736 CELSR2Q9HCU4 2923 aa8.01□□□□□ -1.13
PTPN21-201ENST00000328736 CSMD1Q96PZ7 3565 aa7.95□□□□□ -1.14
PTPN21-201ENST00000328736 KRTAP13-3Q3SY46 172 aa7.93□□□□□ -1.14
PTPN21-201ENST00000328736 LAMA5O15230 3695 aa7.91□□□□□ -1.14
PTPN21-201ENST00000328736 DCHS2Q6V1P9 2916 aa7.91□□□□□ -1.14
PTPN21-201ENST00000328736 ZANQ9Y493 2812 aa7.91□□□□□ -1.14
PTPN21-201ENST00000328736 DMDP11532 3685 aa7.88□□□□□ -1.15
PTPN21-201ENST00000328736 FBN2P35556 2912 aa7.85□□□□□ -1.15
PTPN21-201ENST00000328736 NBPF19A0A087WUL8 3843 aa7.84□□□□□ -1.15
PTPN21-201ENST00000328736 SMG1Q96Q15 3661 aaKnown RBP7.8□□□□□ -1.16
PTPN21-201ENST00000328736 TENM4Q6N022 2769 aa7.78□□□□□ -1.16
PTPN21-201ENST00000328736 NIPBLQ6KC79 2804 aaeCLIP7.75□□□□□ -1.17
PTPN21-201ENST00000328736 CELSR1Q9NYQ6 3014 aa7.7□□□□□ -1.18
PTPN21-201ENST00000328736 NF1P21359 2839 aa7.65□□□□□ -1.18
PTPN21-201ENST00000328736 SVEP1Q4LDE5 3571 aa7.64□□□□□ -1.19
PTPN21-201ENST00000328736 KRTAP13-4Q3LI77 160 aa7.6□□□□□ -1.19
PTPN21-201ENST00000328736 TENM2Q9NT68 2774 aa7.6□□□□□ -1.19
PTPN21-201ENST00000328736 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
PTPN21-201ENST00000328736 ANK3Q12955 4377 aaKnown RBP7.54□□□□□ -1.2
PTPN21-201ENST00000328736 SPENQ96T58 3664 aaKnown RBP7.51□□□□□ -1.21
PTPN21-201ENST00000328736 TENM1Q9UKZ4 2725 aa7.5□□□□□ -1.21
PTPN21-201ENST00000328736 MXRA5Q9NR99 2828 aa7.49□□□□□ -1.21
PTPN21-201ENST00000328736 TGP01266 2768 aa7.46□□□□□ -1.22
PTPN21-201ENST00000328736 TENM3Q9P273 2699 aa7.43□□□□□ -1.22
PTPN21-201ENST00000328736 KRTAP12-1P59990 96 aa7.42□□□□□ -1.22
PTPN21-201ENST00000328736 KRTAP15-1Q3LI76 137 aa7.42□□□□□ -1.22
PTPN21-201ENST00000328736 MUC3AQ02505 3323 aa7.38□□□□□ -1.23
PTPN21-201ENST00000328736 CUBNO60494 3623 aa7.37□□□□□ -1.23
PTPN21-201ENST00000328736 CSMD2Q7Z408 3487 aa7.37□□□□□ -1.23
PTPN21-201ENST00000328736 PDZD2O15018 2839 aa7.36□□□□□ -1.23
PTPN21-201ENST00000328736 ZFHX3Q15911 3703 aa7.34□□□□□ -1.23
PTPN21-201ENST00000328736 KRTAP3-1Q9BYR8 98 aa7.33□□□□□ -1.24
PTPN21-201ENST00000328736 BSNQ9UPA5 3926 aa7.33□□□□□ -1.24
PTPN21-201ENST00000328736 PKD1L1Q8TDX9 2849 aa7.28□□□□□ -1.24
PTPN21-201ENST00000328736 VWFP04275 2813 aa7.26□□□□□ -1.25
PTPN21-201ENST00000328736 TRRAPQ9Y4A5 3859 aa7.2□□□□□ -1.26
PTPN21-201ENST00000328736 HUWE1Q7Z6Z7 4374 aaKnown RBP7.17□□□□□ -1.26
PTPN21-201ENST00000328736 VPS13CQ709C8 3753 aa7.17□□□□□ -1.26
PTPN21-201ENST00000328736 FBN1P35555 2871 aaKnown RBP7.13□□□□□ -1.27
PTPN21-201ENST00000328736 OTOGQ6ZRI0 2925 aa7.12□□□□□ -1.27
PTPN21-201ENST00000328736 INE1O15225 51 aa7.06□□□□□ -1.28
PTPN21-201ENST00000328736 KRTAP10-6P60371 365 aaPredicted RBP7.05□□□□□ -1.28
PTPN21-201ENST00000328736 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
PTPN21-201ENST00000328736 CRCT1Q9UGL9 99 aa6.97□□□□□ -1.29
PTPN21-201ENST00000328736 AKAP9Q99996 3911 aa6.93□□□□□ -1.3
PTPN21-201ENST00000328736 FBN3Q75N90 2809 aa6.92□□□□□ -1.3
PTPN21-201ENST00000328736 MT1HL1P0DM35 61 aa6.92□□□□□ -1.3
PTPN21-201ENST00000328736 KRTAP4-5Q9BYR2 181 aa6.91□□□□□ -1.3
PTPN21-201ENST00000328736 CSMD3Q7Z407 3707 aa6.88□□□□□ -1.31
PTPN21-201ENST00000328736 ALMS1Q8TCU4 4167 aa6.87□□□□□ -1.31
PTPN21-201ENST00000328736 KRTAP3-3Q9BYR6 98 aa6.85□□□□□ -1.31
PTPN21-201ENST00000328736 MEGF8Q7Z7M0 2845 aa6.84□□□□□ -1.31
PTPN21-201ENST00000328736 KRTAP3-2Q9BYR7 98 aa6.81□□□□□ -1.32
PTPN21-201ENST00000328736 KRTAP12-3P60328 96 aa6.77□□□□□ -1.33
PTPN21-201ENST00000328736 KRTAP10-4P60372 401 aaPredicted RBP6.74□□□□□ -1.33
PTPN21-201ENST00000328736 KRTAP23-1A1A580 65 aa6.73□□□□□ -1.33
PTPN21-201ENST00000328736 ZNF469Q96JG9 3925 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms