RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 KRTAP7-1Q8IUC3 87 aa10.04□□□□□ -0.8
PACS1-201ENST00000320580 CRIPTQ9P021 101 aa10.04□□□□□ -0.8
PACS1-201ENST00000320580 STAB2Q8WWQ8 2551 aa10.03□□□□□ -0.8
PACS1-201ENST00000320580 ZNF469Q96JG9 3925 aaPredicted RBP10.02□□□□□ -0.8
PACS1-201ENST00000320580 DMBT1Q9UGM3 2413 aaPredicted RBP10.02□□□□□ -0.81
PACS1-201ENST00000320580 Q96NJ1 140 aa10.02□□□□□ -0.81
PACS1-201ENST00000320580 ZNF861PO60384 105 aa10.02□□□□□ -0.81
PACS1-201ENST00000320580 Q5W150 140 aa10□□□□□ -0.81
PACS1-201ENST00000320580 DMAC1Q96GE9 116 aa10□□□□□ -0.81
PACS1-201ENST00000320580 PSORS1C2Q9UIG4 136 aa9.99□□□□□ -0.81
PACS1-201ENST00000320580 A0A087X002 238 aa9.99□□□□□ -0.81
PACS1-201ENST00000320580 NOTCH2NLQ7Z3S9 236 aa9.99□□□□□ -0.81
PACS1-201ENST00000320580 NBDYA0A0U1RRE5 68 aa9.96□□□□□ -0.81
PACS1-201ENST00000320580 LY6G6CO95867 125 aa9.96□□□□□ -0.81
PACS1-201ENST00000320580 A0A1B0GU33 70 aa9.91□□□□□ -0.82
PACS1-201ENST00000320580 NUPR2A6NF83 97 aa9.9□□□□□ -0.82
PACS1-201ENST00000320580 TENM3Q9P273 2699 aa9.89□□□□□ -0.83
PACS1-201ENST00000320580 KRTAP11-1Q8IUC1 163 aa9.88□□□□□ -0.83
PACS1-201ENST00000320580 PKD1L1Q8TDX9 2849 aa9.88□□□□□ -0.83
PACS1-201ENST00000320580 IGLV7-43P04211 117 aa9.88□□□□□ -0.83
PACS1-201ENST00000320580 ANK3Q12955 4377 aaKnown RBP9.87□□□□□ -0.83
PACS1-201ENST00000320580 PLAC8Q9NZF1 115 aa9.87□□□□□ -0.83
PACS1-201ENST00000320580 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.87□□□□□ -0.83
PACS1-201ENST00000320580 WWC2-AS2Q96NR7 200 aa9.84□□□□□ -0.83
PACS1-201ENST00000320580 TRRAPQ9Y4A5 3859 aa9.83□□□□□ -0.84
PACS1-201ENST00000320580 KRTAP1-5Q9BYS1 174 aa9.82□□□□□ -0.84
PACS1-201ENST00000320580 A0A0D9SG42 100 aa9.81□□□□□ -0.84
PACS1-201ENST00000320580 APLNQ9ULZ1 77 aa9.8□□□□□ -0.84
PACS1-201ENST00000320580 KRTAP25-1Q3LHN0 102 aa9.79□□□□□ -0.84
PACS1-201ENST00000320580 ROMO1P60602 79 aa9.76□□□□□ -0.85
PACS1-201ENST00000320580 TYMSOSQ8TAI1 123 aa9.76□□□□□ -0.85
PACS1-201ENST00000320580 A0A087WTM6 91 aa9.75□□□□□ -0.85
PACS1-201ENST00000320580 PANO1I0J062 215 aa9.74□□□□□ -0.85
PACS1-201ENST00000320580 AKAP9Q99996 3911 aa9.69□□□□□ -0.86
PACS1-201ENST00000320580 LINC00483Q53H64 154 aa9.68□□□□□ -0.86
PACS1-201ENST00000320580 C9orf92A6NGG3 77 aa9.66□□□□□ -0.86
PACS1-201ENST00000320580 H1FX-AS1Q4G0G2 97 aa9.59□□□□□ -0.87
PACS1-201ENST00000320580 TGP01266 2768 aa9.58□□□□□ -0.88
PACS1-201ENST00000320580 A8MUU9 505 aa9.57□□□□□ -0.88
PACS1-201ENST00000320580 TENM2Q9NT68 2774 aa9.56□□□□□ -0.88
PACS1-201ENST00000320580 KRTAP13-1Q8IUC0 172 aa9.55□□□□□ -0.88
PACS1-201ENST00000320580 NDUFAF8A1L188 74 aa9.54□□□□□ -0.88
PACS1-201ENST00000320580 LINC00304Q8N9R0 145 aa9.53□□□□□ -0.88
PACS1-201ENST00000320580 RPL37P61927 97 aaKnown RBP9.48□□□□□ -0.89
PACS1-201ENST00000320580 KRTAP16-1A8MUX0 517 aa9.48□□□□□ -0.89
PACS1-201ENST00000320580 Q6ZSA8 131 aa9.42□□□□□ -0.9
PACS1-201ENST00000320580 SRRM2Q9UQ35 2752 aaKnown RBP9.39□□□□□ -0.91
PACS1-201ENST00000320580 H0YAA0 97 aa9.36□□□□□ -0.91
PACS1-201ENST00000320580 KRTAP13-3Q3SY46 172 aa9.3□□□□□ -0.92
PACS1-201ENST00000320580 LUZP6Q538Z0 58 aa9.28□□□□□ -0.92
PACS1-201ENST00000320580 COX6B2Q6YFQ2 88 aa9.26□□□□□ -0.93
PACS1-201ENST00000320580 C20orf166-AS1Q96NR2 134 aa9.26□□□□□ -0.93
PACS1-201ENST00000320580 A0A0A0MQY5 61 aa9.25□□□□□ -0.93
PACS1-201ENST00000320580 Q6ZRN7 208 aaPredicted RBP9.21□□□□□ -0.93
PACS1-201ENST00000320580 SMR3BP02814 79 aaPredicted RBP9.21□□□□□ -0.94
PACS1-201ENST00000320580 C10orf95Q9H7T3 257 aa9.19□□□□□ -0.94
PACS1-201ENST00000320580 KRTAP13-2Q52LG2 175 aa9.19□□□□□ -0.94
PACS1-201ENST00000320580 FBN3Q75N90 2809 aa9.18□□□□□ -0.94
PACS1-201ENST00000320580 KRTAP21-3Q3LHN1 58 aa9.17□□□□□ -0.94
PACS1-201ENST00000320580 KRTAP10-2P60368 255 aa9.13□□□□□ -0.95
PACS1-201ENST00000320580 S4R3F8 94 aa9.09□□□□□ -0.95
PACS1-201ENST00000320580 MEGF8Q7Z7M0 2845 aa9.08□□□□□ -0.96
PACS1-201ENST00000320580 P0C880 135 aa9.05□□□□□ -0.96
PACS1-201ENST00000320580 KRTAP10-1P60331 282 aa9.02□□□□□ -0.97
PACS1-201ENST00000320580 COL7A1Q02388 2944 aa9□□□□□ -0.97
PACS1-201ENST00000320580 HUWE1Q7Z6Z7 4374 aaKnown RBP8.93□□□□□ -0.98
PACS1-201ENST00000320580 DNHD1Q96M86 4753 aa8.86□□□□□ -0.99
PACS1-201ENST00000320580 TPRXLQ17RH7 258 aa8.85□□□□□ -0.99
PACS1-201ENST00000320580 CSMD3Q7Z407 3707 aa8.84□□□□□ -0.99
PACS1-201ENST00000320580 R4GN34 69 aa8.82□□□□□ -1
PACS1-201ENST00000320580 CAMK2N1Q7Z7J9 78 aa8.81□□□□□ -1
PACS1-201ENST00000320580 M0QZ58 72 aa8.8□□□□□ -1
PACS1-201ENST00000320580 DNAH9Q9NYC9 4486 aa8.79□□□□□ -1
PACS1-201ENST00000320580 KRTAP1-4P0C5Y4 121 aa8.77□□□□□ -1.01
PACS1-201ENST00000320580 ANK2Q01484 3957 aa8.76□□□□□ -1.01
PACS1-201ENST00000320580 RPS29P62273 56 aaKnown RBP8.73□□□□□ -1.01
PACS1-201ENST00000320580 PLAC4Q8WY50 150 aa8.69□□□□□ -1.02
PACS1-201ENST00000320580 PRKDCP78527 4128 aaKnown RBP8.68□□□□□ -1.02
PACS1-201ENST00000320580 KRTAP3-1Q9BYR8 98 aa8.66□□□□□ -1.02
PACS1-201ENST00000320580 PLECQ15149 4684 aaKnown RBP8.61□□□□□ -1.03
PACS1-201ENST00000320580 Q5VSD8 79 aa8.61□□□□□ -1.03
PACS1-201ENST00000320580 CMYA5Q8N3K9 4069 aa8.6□□□□□ -1.03
PACS1-201ENST00000320580 KRTAP15-1Q3LI76 137 aa8.58□□□□□ -1.04
PACS1-201ENST00000320580 KRTAP12-2P59991 146 aa8.55□□□□□ -1.04
PACS1-201ENST00000320580 J3QL48 77 aa8.54□□□□□ -1.04
PACS1-201ENST00000320580 KRTAP13-4Q3LI77 160 aa8.53□□□□□ -1.04
PACS1-201ENST00000320580 STARD9Q9P2P6 4700 aa8.5□□□□□ -1.05
PACS1-201ENST00000320580 KRTAP10-8P60410 259 aa8.5□□□□□ -1.05
PACS1-201ENST00000320580 DNAH10Q8IVF4 4471 aa8.5□□□□□ -1.05
PACS1-201ENST00000320580 DNAH3Q8TD57 4116 aa8.47□□□□□ -1.05
PACS1-201ENST00000320580 KRTAP10-6P60371 365 aaPredicted RBP8.44□□□□□ -1.06
PACS1-201ENST00000320580 KRTAP12-1P59990 96 aa8.39□□□□□ -1.07
PACS1-201ENST00000320580 LYSTQ99698 3801 aa8.39□□□□□ -1.07
PACS1-201ENST00000320580 A0A1B0GVY2 172 aa8.37□□□□□ -1.07
PACS1-201ENST00000320580 DNAH1Q9P2D7 4330 aa8.36□□□□□ -1.07
PACS1-201ENST00000320580 SEC61BP60468 96 aaKnown RBP8.35□□□□□ -1.07
PACS1-201ENST00000320580 KMT2AQ03164 3969 aa8.31□□□□□ -1.08
PACS1-201ENST00000320580 VPS13DQ5THJ4 4388 aa8.31□□□□□ -1.08
PACS1-201ENST00000320580 DNAH11Q96DT5 4516 aa8.27□□□□□ -1.08
PACS1-201ENST00000320580 PP632Q6XCG6 107 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms