RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 Q6ZRN7 208 aaPredicted RBP7.79□□□□□ -1.16
EDEM3-201ENST00000318130 DMXL2Q8TDJ6 3036 aa7.76□□□□□ -1.17
EDEM3-201ENST00000318130 ZFHX4Q86UP3 3567 aa7.75□□□□□ -1.17
EDEM3-201ENST00000318130 A8MUU9 505 aa7.75□□□□□ -1.17
EDEM3-201ENST00000318130 LAMA5O15230 3695 aa7.75□□□□□ -1.17
EDEM3-201ENST00000318130 STAB2Q8WWQ8 2551 aa7.75□□□□□ -1.17
EDEM3-201ENST00000318130 KRTAP13-2Q52LG2 175 aa7.74□□□□□ -1.17
EDEM3-201ENST00000318130 SETXQ7Z333 2677 aaKnown RBP7.74□□□□□ -1.17
EDEM3-201ENST00000318130 COL6A5A8TX70 2615 aa7.72□□□□□ -1.17
EDEM3-201ENST00000318130 LOC400499M0QZD8 3231 aa7.72□□□□□ -1.17
EDEM3-201ENST00000318130 DMXL1Q9Y485 3027 aa7.71□□□□□ -1.17
EDEM3-201ENST00000318130 DMDP11532 3685 aa7.71□□□□□ -1.18
EDEM3-201ENST00000318130 ITPR2Q14571 2701 aa7.7□□□□□ -1.18
EDEM3-201ENST00000318130 KRTAP13-1Q8IUC0 172 aa7.69□□□□□ -1.18
EDEM3-201ENST00000318130 IGSF10Q6WRI0 2623 aa7.69□□□□□ -1.18
EDEM3-201ENST00000318130 MAP1AP78559 2803 aaPredicted RBP7.67□□□□□ -1.18
EDEM3-201ENST00000318130 COL12A1Q99715 3063 aa7.66□□□□□ -1.18
EDEM3-201ENST00000318130 ADGRG4Q8IZF6 3080 aa7.66□□□□□ -1.18
EDEM3-201ENST00000318130 RPS29P62273 56 aaKnown RBP7.65□□□□□ -1.18
EDEM3-201ENST00000318130 RELNP78509 3460 aa7.65□□□□□ -1.19
EDEM3-201ENST00000318130 ZNF292O60281 2723 aa7.64□□□□□ -1.19
EDEM3-201ENST00000318130 KRTAP21-3Q3LHN1 58 aa7.62□□□□□ -1.19
EDEM3-201ENST00000318130 ASH1LQ9NR48 2969 aaKnown RBP7.61□□□□□ -1.19
EDEM3-201ENST00000318130 CSMD1Q96PZ7 3565 aa7.6□□□□□ -1.19
EDEM3-201ENST00000318130 TACC2O95359 2948 aa7.6□□□□□ -1.19
EDEM3-201ENST00000318130 UBR5O95071 2799 aaPredicted RBP7.57□□□□□ -1.2
EDEM3-201ENST00000318130 UTP20O75691 2785 aaKnown RBP7.56□□□□□ -1.2
EDEM3-201ENST00000318130 KRTAP10-8P60410 259 aa7.54□□□□□ -1.2
EDEM3-201ENST00000318130 C10orf95Q9H7T3 257 aa7.53□□□□□ -1.2
EDEM3-201ENST00000318130 NSD1Q96L73 2696 aaPredicted RBP7.52□□□□□ -1.21
EDEM3-201ENST00000318130 KRTAP10-10P60014 251 aa7.51□□□□□ -1.21
EDEM3-201ENST00000318130 TNP1P09430 55 aa7.46□□□□□ -1.21
EDEM3-201ENST00000318130 ITPR1Q14643 2758 aa7.45□□□□□ -1.22
EDEM3-201ENST00000318130 NBEAQ8NFP9 2946 aa7.45□□□□□ -1.22
EDEM3-201ENST00000318130 SPENQ96T58 3664 aaKnown RBP7.43□□□□□ -1.22
EDEM3-201ENST00000318130 H0YAA0 97 aa7.42□□□□□ -1.22
EDEM3-201ENST00000318130 ZZEF1O43149 2961 aa7.42□□□□□ -1.22
EDEM3-201ENST00000318130 XP32Q5T750 250 aa7.41□□□□□ -1.22
EDEM3-201ENST00000318130 HIVEP1P15822 2718 aa7.4□□□□□ -1.23
EDEM3-201ENST00000318130 APCP25054 2843 aa7.38□□□□□ -1.23
EDEM3-201ENST00000318130 KMT2BQ9UMN6 2715 aaPredicted RBP7.37□□□□□ -1.23
EDEM3-201ENST00000318130 SMG1Q96Q15 3661 aaKnown RBP7.35□□□□□ -1.23
EDEM3-201ENST00000318130 P0C880 135 aa7.31□□□□□ -1.24
EDEM3-201ENST00000318130 PP632Q6XCG6 107 aa7.3□□□□□ -1.24
EDEM3-201ENST00000318130 SVEP1Q4LDE5 3571 aa7.27□□□□□ -1.25
EDEM3-201ENST00000318130 KRTAP1-4P0C5Y4 121 aa7.25□□□□□ -1.25
EDEM3-201ENST00000318130 TENM4Q6N022 2769 aa7.23□□□□□ -1.25
EDEM3-201ENST00000318130 ZFHX3Q15911 3703 aa7.23□□□□□ -1.25
EDEM3-201ENST00000318130 CSMD2Q7Z408 3487 aa7.17□□□□□ -1.26
EDEM3-201ENST00000318130 FLNCQ14315 2725 aa7.14□□□□□ -1.27
EDEM3-201ENST00000318130 CELSR2Q9HCU4 2923 aa7.14□□□□□ -1.27
EDEM3-201ENST00000318130 TPRXLQ17RH7 258 aa7.14□□□□□ -1.27
EDEM3-201ENST00000318130 MUC3AQ02505 3323 aa7.11□□□□□ -1.27
EDEM3-201ENST00000318130 CELSR1Q9NYQ6 3014 aa7.1□□□□□ -1.27
EDEM3-201ENST00000318130 NIPBLQ6KC79 2804 aaeCLIP7.1□□□□□ -1.27
EDEM3-201ENST00000318130 TENM2Q9NT68 2774 aa7.08□□□□□ -1.28
EDEM3-201ENST00000318130 BSNQ9UPA5 3926 aa7.07□□□□□ -1.28
EDEM3-201ENST00000318130 KRTAP13-3Q3SY46 172 aa7.06□□□□□ -1.28
EDEM3-201ENST00000318130 CUBNO60494 3623 aa7.06□□□□□ -1.28
EDEM3-201ENST00000318130 HRNRQ86YZ3 2850 aaPredicted RBP7.05□□□□□ -1.28
EDEM3-201ENST00000318130 DCHS2Q6V1P9 2916 aa7.05□□□□□ -1.28
EDEM3-201ENST00000318130 PRO2289Q9P1D8 64 aa7.04□□□□□ -1.28
EDEM3-201ENST00000318130 ANK3Q12955 4377 aaKnown RBP7.01□□□□□ -1.29
EDEM3-201ENST00000318130 FBN2P35556 2912 aa6.96□□□□□ -1.29
EDEM3-201ENST00000318130 KRTAP12-2P59991 146 aa6.93□□□□□ -1.3
EDEM3-201ENST00000318130 VPS13CQ709C8 3753 aa6.9□□□□□ -1.3
EDEM3-201ENST00000318130 ZANQ9Y493 2812 aa6.9□□□□□ -1.3
EDEM3-201ENST00000318130 TGP01266 2768 aa6.9□□□□□ -1.3
EDEM3-201ENST00000318130 NF1P21359 2839 aa6.89□□□□□ -1.31
EDEM3-201ENST00000318130 TENM1Q9UKZ4 2725 aa6.89□□□□□ -1.31
EDEM3-201ENST00000318130 TENM3Q9P273 2699 aa6.81□□□□□ -1.32
EDEM3-201ENST00000318130 KRTAP4-5Q9BYR2 181 aa6.79□□□□□ -1.32
EDEM3-201ENST00000318130 CRCT1Q9UGL9 99 aa6.79□□□□□ -1.32
EDEM3-201ENST00000318130 TRRAPQ9Y4A5 3859 aa6.79□□□□□ -1.32
EDEM3-201ENST00000318130 KRTAP12-1P59990 96 aa6.77□□□□□ -1.33
EDEM3-201ENST00000318130 KRTAP13-4Q3LI77 160 aa6.74□□□□□ -1.33
EDEM3-201ENST00000318130 PKD1L1Q8TDX9 2849 aa6.74□□□□□ -1.33
EDEM3-201ENST00000318130 AKAP9Q99996 3911 aa6.73□□□□□ -1.33
EDEM3-201ENST00000318130 VWFP04275 2813 aa6.73□□□□□ -1.33
EDEM3-201ENST00000318130 HUWE1Q7Z6Z7 4374 aaKnown RBP6.72□□□□□ -1.33
EDEM3-201ENST00000318130 KRTAP3-1Q9BYR8 98 aa6.7□□□□□ -1.34
EDEM3-201ENST00000318130 CSMD3Q7Z407 3707 aa6.65□□□□□ -1.34
EDEM3-201ENST00000318130 MXRA5Q9NR99 2828 aa6.64□□□□□ -1.35
EDEM3-201ENST00000318130 PDZD2O15018 2839 aa6.62□□□□□ -1.35
EDEM3-201ENST00000318130 FBN1P35555 2871 aaKnown RBP6.62□□□□□ -1.35
EDEM3-201ENST00000318130 KRTAP10-6P60371 365 aaPredicted RBP6.54□□□□□ -1.36
EDEM3-201ENST00000318130 ZNF469Q96JG9 3925 aaPredicted RBP6.52□□□□□ -1.37
EDEM3-201ENST00000318130 ALMS1Q8TCU4 4167 aa6.52□□□□□ -1.37
EDEM3-201ENST00000318130 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.37
EDEM3-201ENST00000318130 OTOGQ6ZRI0 2925 aa6.4□□□□□ -1.38
EDEM3-201ENST00000318130 MT1HL1P0DM35 61 aa6.37□□□□□ -1.39
EDEM3-201ENST00000318130 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
EDEM3-201ENST00000318130 INE1O15225 51 aa6.29□□□□□ -1.4
EDEM3-201ENST00000318130 KRTAP3-2Q9BYR7 98 aa6.29□□□□□ -1.4
EDEM3-201ENST00000318130 KRTAP3-3Q9BYR6 98 aa6.24□□□□□ -1.41
EDEM3-201ENST00000318130 COL7A1Q02388 2944 aa6.21□□□□□ -1.41
EDEM3-201ENST00000318130 FBN3Q75N90 2809 aa6.19□□□□□ -1.42
EDEM3-201ENST00000318130 DNAH9Q9NYC9 4486 aa6.17□□□□□ -1.42
EDEM3-201ENST00000318130 MEGF8Q7Z7M0 2845 aa6.16□□□□□ -1.42
EDEM3-201ENST00000318130 KRTAP10-12P60413 245 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms