RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 LINC01558Q9Y6Z2 57 aa11.77□□□□□ -0.53
ZNF554-201ENST00000317243 A0A087WTM6 91 aa11.75□□□□□ -0.53
ZNF554-201ENST00000317243 SPRR1BP22528 89 aa11.75□□□□□ -0.53
ZNF554-201ENST00000317243 C7orf65Q6ZTY9 151 aa11.75□□□□□ -0.53
ZNF554-201ENST00000317243 IGLV9-49A0A0B4J1Y8 123 aa11.74□□□□□ -0.53
ZNF554-201ENST00000317243 DNAH11Q96DT5 4516 aa11.73□□□□□ -0.53
ZNF554-201ENST00000317243 PLAC8Q9NZF1 115 aa11.73□□□□□ -0.53
ZNF554-201ENST00000317243 SPACA4Q8TDM5 124 aa11.72□□□□□ -0.53
ZNF554-201ENST00000317243 ANAPC11Q9NYG5 84 aa11.71□□□□□ -0.53
ZNF554-201ENST00000317243 DNAH5Q8TE73 4624 aa11.71□□□□□ -0.53
ZNF554-201ENST00000317243 HRES1P13985 223 aa11.69□□□□□ -0.54
ZNF554-201ENST00000317243 RTL8CO15255 209 aa11.68□□□□□ -0.54
ZNF554-201ENST00000317243 KRTAP13-1Q8IUC0 172 aa11.68□□□□□ -0.54
ZNF554-201ENST00000317243 ALMS1Q8TCU4 4167 aa11.64□□□□□ -0.55
ZNF554-201ENST00000317243 Q6ZR54 194 aa11.64□□□□□ -0.55
ZNF554-201ENST00000317243 TP53AIP1Q9HCN2 124 aa11.63□□□□□ -0.55
ZNF554-201ENST00000317243 LY6G6CO95867 125 aa11.62□□□□□ -0.55
ZNF554-201ENST00000317243 PSORS1C2Q9UIG4 136 aa11.62□□□□□ -0.55
ZNF554-201ENST00000317243 IGHV6-1A0A0B4J1U7 121 aa11.62□□□□□ -0.55
ZNF554-201ENST00000317243 Q96NJ1 140 aa11.61□□□□□ -0.55
ZNF554-201ENST00000317243 ASB16-AS1Q495Z4 193 aa11.59□□□□□ -0.55
ZNF554-201ENST00000317243 C8orf17Q9NRJ1 99 aa11.59□□□□□ -0.55
ZNF554-201ENST00000317243 PRR26Q8N8Z3 221 aa11.59□□□□□ -0.55
ZNF554-201ENST00000317243 LRP1BQ9NZR2 4599 aa11.56□□□□□ -0.56
ZNF554-201ENST00000317243 PRAC1Q96KF2 57 aa11.56□□□□□ -0.56
ZNF554-201ENST00000317243 IGLV5-52A0A0A0MRZ9 124 aa11.55□□□□□ -0.56
ZNF554-201ENST00000317243 LINC00313P59037 77 aa11.54□□□□□ -0.56
ZNF554-201ENST00000317243 PKD1P98161 4303 aa11.54□□□□□ -0.56
ZNF554-201ENST00000317243 C1orf134Q5TEV5 83 aa11.53□□□□□ -0.56
ZNF554-201ENST00000317243 FAT2Q9NYQ8 4349 aa11.53□□□□□ -0.56
ZNF554-201ENST00000317243 CDK2AP2O75956 126 aa11.51□□□□□ -0.57
ZNF554-201ENST00000317243 KRTAP10-2P60368 255 aa11.51□□□□□ -0.57
ZNF554-201ENST00000317243 A0A087X002 238 aa11.51□□□□□ -0.57
ZNF554-201ENST00000317243 NOTCH2NLQ7Z3S9 236 aa11.51□□□□□ -0.57
ZNF554-201ENST00000317243 A0A1B0GVX0 72 aa11.5□□□□□ -0.57
ZNF554-201ENST00000317243 C8orf87E5RJ46 101 aa11.49□□□□□ -0.57
ZNF554-201ENST00000317243 ADM2Q7Z4H4 148 aa11.49□□□□□ -0.57
ZNF554-201ENST00000317243 MRPL34Q9BQ48 92 aaKnown RBP11.47□□□□□ -0.57
ZNF554-201ENST00000317243 WWC2-AS2Q96NR7 200 aa11.47□□□□□ -0.57
ZNF554-201ENST00000317243 SPINK6Q6UWN8 80 aa11.45□□□□□ -0.58
ZNF554-201ENST00000317243 PKHD1P08F94 4074 aa11.45□□□□□ -0.58
ZNF554-201ENST00000317243 ZNF861PO60384 105 aa11.42□□□□□ -0.58
ZNF554-201ENST00000317243 LINC00483Q53H64 154 aa11.42□□□□□ -0.58
ZNF554-201ENST00000317243 VPS13BQ7Z7G8 4022 aa11.41□□□□□ -0.58
ZNF554-201ENST00000317243 Q5W150 140 aa11.41□□□□□ -0.58
ZNF554-201ENST00000317243 CIRBP-AS1Q8TBR5 109 aa11.39□□□□□ -0.59
ZNF554-201ENST00000317243 ZNF706Q9Y5V0 76 aaPredicted RBP11.38□□□□□ -0.59
ZNF554-201ENST00000317243 IGLV7-43P04211 117 aa11.34□□□□□ -0.59
ZNF554-201ENST00000317243 C4orf48Q5BLP8 95 aa11.34□□□□□ -0.59
ZNF554-201ENST00000317243 ACYP2P14621 99 aa11.33□□□□□ -0.6
ZNF554-201ENST00000317243 SACSQ9NZJ4 4579 aa11.31□□□□□ -0.6
ZNF554-201ENST00000317243 KRTAP10-1P60331 282 aa11.31□□□□□ -0.6
ZNF554-201ENST00000317243 PLA2G1BP04054 148 aaKnown RBP11.3□□□□□ -0.6
ZNF554-201ENST00000317243 KRTAP13-3Q3SY46 172 aa11.28□□□□□ -0.6
ZNF554-201ENST00000317243 LINC01554Q52M75 96 aa11.28□□□□□ -0.6
ZNF554-201ENST00000317243 A0A1B0GU69 56 aa11.27□□□□□ -0.61
ZNF554-201ENST00000317243 RETNLBQ9BQ08 111 aa11.24□□□□□ -0.61
ZNF554-201ENST00000317243 SPATA8Q6RVD6 105 aa11.21□□□□□ -0.62
ZNF554-201ENST00000317243 DMAC1Q96GE9 116 aa11.21□□□□□ -0.62
ZNF554-201ENST00000317243 MIR22HGQ0VDD5 57 aa11.17□□□□□ -0.62
ZNF554-201ENST00000317243 KRTAP13-2Q52LG2 175 aa11.16□□□□□ -0.62
ZNF554-201ENST00000317243 FAT1Q14517 4588 aa11.13□□□□□ -0.63
ZNF554-201ENST00000317243 Q6ZSA8 131 aa11.13□□□□□ -0.63
ZNF554-201ENST00000317243 DYNC1H1Q14204 4646 aaKnown RBP11.12□□□□□ -0.63
ZNF554-201ENST00000317243 UQCR11O14957 56 aa11.12□□□□□ -0.63
ZNF554-201ENST00000317243 H3BS24 57 aa11.1□□□□□ -0.63
ZNF554-201ENST00000317243 CSAG1Q6PB30 78 aa11.09□□□□□ -0.63
ZNF554-201ENST00000317243 KMT2CQ8NEZ4 4911 aaKnown RBP11.07□□□□□ -0.64
ZNF554-201ENST00000317243 KRTAP1-4P0C5Y4 121 aa11.03□□□□□ -0.64
ZNF554-201ENST00000317243 FAM229AH3BQW9 127 aa11.02□□□□□ -0.65
ZNF554-201ENST00000317243 SSBP3-AS1Q7Z2R9 100 aa11.02□□□□□ -0.65
ZNF554-201ENST00000317243 IGKV2-30P06310 120 aa11□□□□□ -0.65
ZNF554-201ENST00000317243 SMR3BP02814 79 aaPredicted RBP10.99□□□□□ -0.65
ZNF554-201ENST00000317243 IGKV2D-30A0A075B6S6 120 aa10.96□□□□□ -0.66
ZNF554-201ENST00000317243 APOBP04114 4563 aaKnown RBP10.95□□□□□ -0.66
ZNF554-201ENST00000317243 RYR2Q92736 4967 aa10.94□□□□□ -0.66
ZNF554-201ENST00000317243 SPINK1P00995 79 aa10.87□□□□□ -0.67
ZNF554-201ENST00000317243 KRTAP16-1A8MUX0 517 aa10.86□□□□□ -0.67
ZNF554-201ENST00000317243 TYMSOSQ8TAI1 123 aa10.84□□□□□ -0.67
ZNF554-201ENST00000317243 KRTAP21-3Q3LHN1 58 aa10.8□□□□□ -0.68
ZNF554-201ENST00000317243 LRP1Q07954 4544 aaKnown RBP10.74□□□□□ -0.69
ZNF554-201ENST00000317243 PKHD1L1Q86WI1 4243 aa10.74□□□□□ -0.69
ZNF554-201ENST00000317243 Q8N1X5 172 aa10.73□□□□□ -0.69
ZNF554-201ENST00000317243 RYR3Q15413 4870 aa10.72□□□□□ -0.69
ZNF554-201ENST00000317243 A0A1B0GVY2 172 aa10.71□□□□□ -0.7
ZNF554-201ENST00000317243 H0YAA0 97 aa10.67□□□□□ -0.7
ZNF554-201ENST00000317243 A8MUU9 505 aa10.66□□□□□ -0.7
ZNF554-201ENST00000317243 LINC00304Q8N9R0 145 aa10.66□□□□□ -0.7
ZNF554-201ENST00000317243 FLG2Q5D862 2391 aaPredicted RBP10.65□□□□□ -0.7
ZNF554-201ENST00000317243 KRTAP10-4P60372 401 aaPredicted RBP10.64□□□□□ -0.71
ZNF554-201ENST00000317243 KRTAP25-1Q3LHN0 102 aa10.64□□□□□ -0.71
ZNF554-201ENST00000317243 C9orf92A6NGG3 77 aa10.61□□□□□ -0.71
ZNF554-201ENST00000317243 ROMO1P60602 79 aa10.58□□□□□ -0.72
ZNF554-201ENST00000317243 HSPG2P98160 4391 aa10.56□□□□□ -0.72
ZNF554-201ENST00000317243 CRIPTQ9P021 101 aa10.55□□□□□ -0.72
ZNF554-201ENST00000317243 MYCBP2O75592 4640 aa10.53□□□□□ -0.72
ZNF554-201ENST00000317243 A0A1B0GU33 70 aa10.5□□□□□ -0.73
ZNF554-201ENST00000317243 TNXBP22105 4242 aa10.49□□□□□ -0.73
ZNF554-201ENST00000317243 KIAA1109Q2LD37 5005 aa10.46□□□□□ -0.73
ZNF554-201ENST00000317243 FAT3Q8TDW7 4589 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms