RNA–Protein interactions for RNA: ENST00000307980.6

RAD9A-201, Transcript of RAD9 checkpoint clamp component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD9A, Length 2,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-201ENST00000307980 LIMD2Q9BT23 127 aa12.7□□□□□ -0.38
RAD9A-201ENST00000307980 IGHV6-1A0A0B4J1U7 121 aa12.69□□□□□ -0.38
RAD9A-201ENST00000307980 SPAG11AQ6PDA7 123 aa12.69□□□□□ -0.38
RAD9A-201ENST00000307980 A0A1B0GVX0 72 aa12.68□□□□□ -0.38
RAD9A-201ENST00000307980 KRTAP29-1A8MX34 341 aaPredicted RBP12.68□□□□□ -0.38
RAD9A-201ENST00000307980 MMP24-AS1A0A0U1RRL7 71 aa12.67□□□□□ -0.38
RAD9A-201ENST00000307980 SVIPQ8NHG7 77 aa12.65□□□□□ -0.38
RAD9A-201ENST00000307980 CCDC179H3BU77 68 aa12.64□□□□□ -0.39
RAD9A-201ENST00000307980 BIRC6Q9NR09 4857 aa12.63□□□□□ -0.39
RAD9A-201ENST00000307980 RPS29P62273 56 aaKnown RBP12.63□□□□□ -0.39
RAD9A-201ENST00000307980 C8orf17Q9NRJ1 99 aa12.63□□□□□ -0.39
RAD9A-201ENST00000307980 CASC2Q6XLA1 102 aa12.62□□□□□ -0.39
RAD9A-201ENST00000307980 SERP2Q8N6R1 65 aa12.62□□□□□ -0.39
RAD9A-201ENST00000307980 OCR1Q9BZK8 76 aa12.61□□□□□ -0.39
RAD9A-201ENST00000307980 COX7CP15954 63 aa12.59□□□□□ -0.39
RAD9A-201ENST00000307980 hDV103S1A0JD37 113 aa12.58□□□□□ -0.4
RAD9A-201ENST00000307980 TRAV7A0A075B6U4 112 aa12.57□□□□□ -0.4
RAD9A-201ENST00000307980 MT1HL1P0DM35 61 aa12.56□□□□□ -0.4
RAD9A-201ENST00000307980 DMBT1Q9UGM3 2413 aaPredicted RBP12.54□□□□□ -0.4
RAD9A-201ENST00000307980 RETNLBQ9BQ08 111 aa12.54□□□□□ -0.4
RAD9A-201ENST00000307980 ABCA13Q86UQ4 5058 aa12.53□□□□□ -0.4
RAD9A-201ENST00000307980 UQCRQO14949 82 aa12.52□□□□□ -0.41
RAD9A-201ENST00000307980 SMIM20Q8N5G0 67 aa12.52□□□□□ -0.41
RAD9A-201ENST00000307980 HERC2O95714 4834 aa12.51□□□□□ -0.41
RAD9A-201ENST00000307980 LINC00313P59037 77 aa12.49□□□□□ -0.41
RAD9A-201ENST00000307980 MRPL34Q9BQ48 92 aaKnown RBP12.46□□□□□ -0.42
RAD9A-201ENST00000307980 CYSTM1Q9H1C7 97 aa12.46□□□□□ -0.42
RAD9A-201ENST00000307980 C8orf87E5RJ46 101 aa12.44□□□□□ -0.42
RAD9A-201ENST00000307980 TMEM254Q8TBM7 123 aa12.44□□□□□ -0.42
RAD9A-201ENST00000307980 C20orf197Q8N268 126 aa12.43□□□□□ -0.42
RAD9A-201ENST00000307980 KRTAP16-1A8MUX0 517 aa12.41□□□□□ -0.42
RAD9A-201ENST00000307980 NDUFS5O43920 106 aa12.38□□□□□ -0.43
RAD9A-201ENST00000307980 SNURFQ9Y675 71 aa12.38□□□□□ -0.43
RAD9A-201ENST00000307980 OXTP01178 125 aa12.37□□□□□ -0.43
RAD9A-201ENST00000307980 C9orf92A6NGG3 77 aa12.33□□□□□ -0.44
RAD9A-201ENST00000307980 C5orf47Q569G3 176 aa12.32□□□□□ -0.44
RAD9A-201ENST00000307980 Q8N9P0 234 aaPredicted RBP12.32□□□□□ -0.44
RAD9A-201ENST00000307980 A0A0U1RQV1 116 aa12.31□□□□□ -0.44
RAD9A-201ENST00000307980 KLKP1Q107X0 134 aa12.29□□□□□ -0.44
RAD9A-201ENST00000307980 Q5W150 140 aa12.29□□□□□ -0.44
RAD9A-201ENST00000307980 TP53AIP1Q9HCN2 124 aa12.29□□□□□ -0.44
RAD9A-201ENST00000307980 H0Y9P7 68 aa12.26□□□□□ -0.45
RAD9A-201ENST00000307980 TRAV22A0A0B4J277 110 aa12.23□□□□□ -0.45
RAD9A-201ENST00000307980 ZCCHC13Q8WW36 166 aaKnown RBP12.23□□□□□ -0.45
RAD9A-201ENST00000307980 LINC00208Q96KT6 92 aa12.22□□□□□ -0.45
RAD9A-201ENST00000307980 KRTAP13-3Q3SY46 172 aa12.21□□□□□ -0.45
RAD9A-201ENST00000307980 MP68P56378 58 aa12.2□□□□□ -0.46
RAD9A-201ENST00000307980 H7BZZ5 65 aa12.19□□□□□ -0.46
RAD9A-201ENST00000307980 FP248Q71RG6 208 aaPredicted RBP12.17□□□□□ -0.46
RAD9A-201ENST00000307980 IGLV7-46A0A075B6I9 117 aa12.17□□□□□ -0.46
RAD9A-201ENST00000307980 C1orf64Q8NEQ6 169 aa12.16□□□□□ -0.46
RAD9A-201ENST00000307980 PCLOQ9Y6V0 5065 aa12.13□□□□□ -0.47
RAD9A-201ENST00000307980 C20orf166-AS1Q96NR2 134 aa12.11□□□□□ -0.47
RAD9A-201ENST00000307980 A8MUU9 505 aa12.11□□□□□ -0.47
RAD9A-201ENST00000307980 PRR4Q16378 134 aa12.11□□□□□ -0.47
RAD9A-201ENST00000307980 H3BPC8 53 aa12.09□□□□□ -0.47
RAD9A-201ENST00000307980 J3QL48 77 aa12.09□□□□□ -0.47
RAD9A-201ENST00000307980 LPAP08519 4548 aa12.06□□□□□ -0.48
RAD9A-201ENST00000307980 NDUFC1O43677 76 aa12.05□□□□□ -0.48
RAD9A-201ENST00000307980 TMEM258P61165 79 aa12□□□□□ -0.49
RAD9A-201ENST00000307980 PCOTHQ58A44 107 aa11.99□□□□□ -0.49
RAD9A-201ENST00000307980 XP32Q5T750 250 aa11.99□□□□□ -0.49
RAD9A-201ENST00000307980 Q75L30 129 aa11.98□□□□□ -0.49
RAD9A-201ENST00000307980 CYP4F30PQ9H0H9 118 aa11.98□□□□□ -0.49
RAD9A-201ENST00000307980 LOC101927531A0A1B0GV80 90 aa11.96□□□□□ -0.49
RAD9A-201ENST00000307980 LRP2P98164 4655 aa11.95□□□□□ -0.5
RAD9A-201ENST00000307980 IGKV2-30P06310 120 aa11.95□□□□□ -0.5
RAD9A-201ENST00000307980 IGKV2D-30A0A075B6S6 120 aa11.91□□□□□ -0.5
RAD9A-201ENST00000307980 FAM236DA0A1B0GTK5 79 aa11.91□□□□□ -0.5
RAD9A-201ENST00000307980 FAM236CP0DP71 79 aa11.91□□□□□ -0.5
RAD9A-201ENST00000307980 TPRXLQ17RH7 258 aa11.9□□□□□ -0.5
RAD9A-201ENST00000307980 RPL37P61927 97 aaKnown RBP11.89□□□□□ -0.51
RAD9A-201ENST00000307980 HERC1Q15751 4861 aa11.89□□□□□ -0.51
RAD9A-201ENST00000307980 ATP11AUNQ6ZP68 121 aa11.81□□□□□ -0.52
RAD9A-201ENST00000307980 HRES1P13985 223 aa11.8□□□□□ -0.52
RAD9A-201ENST00000307980 RPS28P62857 69 aaKnown RBP11.8□□□□□ -0.52
RAD9A-201ENST00000307980 SPANXA2-OT1Q8N9U9 137 aa11.8□□□□□ -0.52
RAD9A-201ENST00000307980 C7orf65Q6ZTY9 151 aa11.77□□□□□ -0.53
RAD9A-201ENST00000307980 SPINK7P58062 85 aa11.76□□□□□ -0.53
RAD9A-201ENST00000307980 ATP5EP56381 51 aaPredicted RBP11.74□□□□□ -0.53
RAD9A-201ENST00000307980 HMCN2Q8NDA2 5059 aa11.65□□□□□ -0.54
RAD9A-201ENST00000307980 C4orf26Q17RF5 130 aa11.65□□□□□ -0.55
RAD9A-201ENST00000307980 SERP1Q9Y6X1 66 aa11.65□□□□□ -0.55
RAD9A-201ENST00000307980 DMAC1Q96GE9 116 aa11.56□□□□□ -0.56
RAD9A-201ENST00000307980 KRTAP3-1Q9BYR8 98 aa11.54□□□□□ -0.56
RAD9A-201ENST00000307980 COA5Q86WW8 74 aa11.51□□□□□ -0.57
RAD9A-201ENST00000307980 ACYP2P14621 99 aa11.48□□□□□ -0.57
RAD9A-201ENST00000307980 MUC17Q685J3 4493 aa11.46□□□□□ -0.58
RAD9A-201ENST00000307980 SEC61BP60468 96 aaKnown RBP11.45□□□□□ -0.58
RAD9A-201ENST00000307980 KRTAP4-1Q9BYQ7 146 aa11.45□□□□□ -0.58
RAD9A-201ENST00000307980 COX6B2Q6YFQ2 88 aa11.41□□□□□ -0.58
RAD9A-201ENST00000307980 MUC2Q02817 5179 aa11.41□□□□□ -0.58
RAD9A-201ENST00000307980 SMIM26A0A096LP01 95 aa11.39□□□□□ -0.59
RAD9A-201ENST00000307980 A8MUN3 132 aa11.35□□□□□ -0.59
RAD9A-201ENST00000307980 MPLKIPQ8TAP9 179 aa11.35□□□□□ -0.59
RAD9A-201ENST00000307980 CHKB-CPT1BH3BT56 60 aa11.27□□□□□ -0.6
RAD9A-201ENST00000307980 UBR4Q5T4S7 5183 aa11.22□□□□□ -0.61
RAD9A-201ENST00000307980 RBM12B-AS1Q9P1G2 102 aa11.17□□□□□ -0.62
RAD9A-201ENST00000307980 Q1T7F1 81 aa11.15□□□□□ -0.62
RAD9A-201ENST00000307980 H1FX-AS1Q4G0G2 97 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms