RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 XP32Q5T750 250 aa2.94□□□□□ -1.94
CPSF2-201ENST00000298875 APCP25054 2843 aa2.94□□□□□ -1.94
CPSF2-201ENST00000298875 WDFY4Q6ZS81 3184 aa2.94□□□□□ -1.94
CPSF2-201ENST00000298875 EYSQ5T1H1 3165 aa2.93□□□□□ -1.94
CPSF2-201ENST00000298875 UBR5O95071 2799 aaPredicted RBP2.93□□□□□ -1.94
CPSF2-201ENST00000298875 TPRXLQ17RH7 258 aa2.93□□□□□ -1.94
CPSF2-201ENST00000298875 USP34Q70CQ2 3546 aa2.93□□□□□ -1.94
CPSF2-201ENST00000298875 VCANP13611 3396 aa2.91□□□□□ -1.94
CPSF2-201ENST00000298875 LAMA2P24043 3122 aaKnown RBP2.9□□□□□ -1.95
CPSF2-201ENST00000298875 COL12A1Q99715 3063 aa2.9□□□□□ -1.95
CPSF2-201ENST00000298875 TENM1Q9UKZ4 2725 aa2.89□□□□□ -1.95
CPSF2-201ENST00000298875 DSPP15924 2871 aaKnown RBP2.89□□□□□ -1.95
CPSF2-201ENST00000298875 TRIOO75962 3097 aa2.89□□□□□ -1.95
CPSF2-201ENST00000298875 KRTAP10-10P60014 251 aa2.88□□□□□ -1.95
CPSF2-201ENST00000298875 DNAH14Q0VDD8 3507 aa2.88□□□□□ -1.95
CPSF2-201ENST00000298875 KRTAP1-4P0C5Y4 121 aa2.87□□□□□ -1.95
CPSF2-201ENST00000298875 TGP01266 2768 aa2.87□□□□□ -1.95
CPSF2-201ENST00000298875 DMXL2Q8TDJ6 3036 aa2.87□□□□□ -1.95
CPSF2-201ENST00000298875 VPS13AQ96RL7 3174 aa2.86□□□□□ -1.95
CPSF2-201ENST00000298875 KRTAP13-4Q3LI77 160 aa2.85□□□□□ -1.95
CPSF2-201ENST00000298875 FRYLO94915 3013 aa2.84□□□□□ -1.95
CPSF2-201ENST00000298875 NBEAL2Q6ZNJ1 2754 aa2.84□□□□□ -1.96
CPSF2-201ENST00000298875 ASH1LQ9NR48 2969 aaKnown RBP2.83□□□□□ -1.96
CPSF2-201ENST00000298875 KRTAP13-3Q3SY46 172 aa2.82□□□□□ -1.96
CPSF2-201ENST00000298875 TENM4Q6N022 2769 aa2.82□□□□□ -1.96
CPSF2-201ENST00000298875 FLNCQ14315 2725 aa2.82□□□□□ -1.96
CPSF2-201ENST00000298875 DMXL1Q9Y485 3027 aa2.82□□□□□ -1.96
CPSF2-201ENST00000298875 KRTAP12-2P59991 146 aa2.81□□□□□ -1.96
CPSF2-201ENST00000298875 FREM2Q5SZK8 3169 aa2.81□□□□□ -1.96
CPSF2-201ENST00000298875 LAMA1P25391 3075 aa2.8□□□□□ -1.96
CPSF2-201ENST00000298875 ATMQ13315 3056 aa2.8□□□□□ -1.96
CPSF2-201ENST00000298875 ADGRG4Q8IZF6 3080 aa2.8□□□□□ -1.96
CPSF2-201ENST00000298875 FRYQ5TBA9 3013 aa2.78□□□□□ -1.96
CPSF2-201ENST00000298875 KALRNO60229 2985 aa2.77□□□□□ -1.97
CPSF2-201ENST00000298875 KRTAP23-1A1A580 65 aa2.76□□□□□ -1.97
CPSF2-201ENST00000298875 CELSR3Q9NYQ7 3312 aa2.76□□□□□ -1.97
CPSF2-201ENST00000298875 SPTBN5Q9NRC6 3674 aaKnown RBP2.76□□□□□ -1.97
CPSF2-201ENST00000298875 ASPMQ8IZT6 3477 aa2.75□□□□□ -1.97
CPSF2-201ENST00000298875 KRTAP15-1Q3LI76 137 aa2.74□□□□□ -1.97
CPSF2-201ENST00000298875 NBEAQ8NFP9 2946 aa2.73□□□□□ -1.97
CPSF2-201ENST00000298875 MUC3AQ02505 3323 aa2.73□□□□□ -1.97
CPSF2-201ENST00000298875 BOD1L1Q8NFC6 3051 aa2.73□□□□□ -1.97
CPSF2-201ENST00000298875 DCHS1Q96JQ0 3298 aa2.7□□□□□ -1.98
CPSF2-201ENST00000298875 LOC400499M0QZD8 3231 aa2.7□□□□□ -1.98
CPSF2-201ENST00000298875 KRTAP12-1P59990 96 aa2.7□□□□□ -1.98
CPSF2-201ENST00000298875 CFAP47Q6ZTR5 3102 aa2.68□□□□□ -1.98
CPSF2-201ENST00000298875 MYO15AQ9UKN7 3530 aa2.68□□□□□ -1.98
CPSF2-201ENST00000298875 LRBAP50851 2863 aa2.67□□□□□ -1.98
CPSF2-201ENST00000298875 ZANQ9Y493 2812 aa2.66□□□□□ -1.98
CPSF2-201ENST00000298875 WDFY3Q8IZQ1 3526 aa2.65□□□□□ -1.98
CPSF2-201ENST00000298875 ZZEF1O43149 2961 aa2.65□□□□□ -1.98
CPSF2-201ENST00000298875 CRYBG3Q68DQ2 2970 aa2.65□□□□□ -1.99
CPSF2-201ENST00000298875 ZFHX4Q86UP3 3567 aa2.65□□□□□ -1.99
CPSF2-201ENST00000298875 SPEGQ15772 3267 aa2.65□□□□□ -1.99
CPSF2-201ENST00000298875 CELSR2Q9HCU4 2923 aa2.65□□□□□ -1.99
CPSF2-201ENST00000298875 NF1P21359 2839 aa2.63□□□□□ -1.99
CPSF2-201ENST00000298875 NBPF19A0A087WUL8 3843 aa2.63□□□□□ -1.99
CPSF2-201ENST00000298875 PDZD2O15018 2839 aa2.63□□□□□ -1.99
CPSF2-201ENST00000298875 CELSR1Q9NYQ6 3014 aa2.63□□□□□ -1.99
CPSF2-201ENST00000298875 KRTAP3-1Q9BYR8 98 aa2.61□□□□□ -1.99
CPSF2-201ENST00000298875 FBN2P35556 2912 aa2.61□□□□□ -1.99
CPSF2-201ENST00000298875 MXRA5Q9NR99 2828 aa2.59□□□□□ -1.99
CPSF2-201ENST00000298875 OTOGQ6ZRI0 2925 aa2.59□□□□□ -1.99
CPSF2-201ENST00000298875 SRRM2Q9UQ35 2752 aaKnown RBP2.59□□□□□ -2
CPSF2-201ENST00000298875 CRCT1Q9UGL9 99 aa2.58□□□□□ -2
CPSF2-201ENST00000298875 TENM2Q9NT68 2774 aa2.57□□□□□ -2
CPSF2-201ENST00000298875 TACC2O95359 2948 aa2.56□□□□□ -2
CPSF2-201ENST00000298875 RELNP78509 3460 aa2.55□□□□□ -2
CPSF2-201ENST00000298875 KRTAP10-6P60371 365 aaPredicted RBP2.54□□□□□ -2
CPSF2-201ENST00000298875 ANK3Q12955 4377 aaKnown RBP2.52□□□□□ -2.01
CPSF2-201ENST00000298875 KRTAP10-12P60413 245 aa2.52□□□□□ -2.01
CPSF2-201ENST00000298875 AKAP9Q99996 3911 aa2.52□□□□□ -2.01
CPSF2-201ENST00000298875 BSNQ9UPA5 3926 aa2.51□□□□□ -2.01
CPSF2-201ENST00000298875 DCHS2Q6V1P9 2916 aa2.5□□□□□ -2.01
CPSF2-201ENST00000298875 FBN3Q75N90 2809 aa2.49□□□□□ -2.01
CPSF2-201ENST00000298875 ZFHX3Q15911 3703 aa2.49□□□□□ -2.01
CPSF2-201ENST00000298875 KRTAP19-4Q3LI73 84 aa2.48□□□□□ -2.01
CPSF2-201ENST00000298875 HRNRQ86YZ3 2850 aaPredicted RBP2.48□□□□□ -2.01
CPSF2-201ENST00000298875 LAMA5O15230 3695 aa2.48□□□□□ -2.01
CPSF2-201ENST00000298875 CSMD1Q96PZ7 3565 aa2.46□□□□□ -2.02
CPSF2-201ENST00000298875 KRTAP3-3Q9BYR6 98 aa2.45□□□□□ -2.02
CPSF2-201ENST00000298875 MT1HL1P0DM35 61 aa2.44□□□□□ -2.02
CPSF2-201ENST00000298875 SPENQ96T58 3664 aaKnown RBP2.44□□□□□ -2.02
CPSF2-201ENST00000298875 KRTAP3-2Q9BYR7 98 aa2.43□□□□□ -2.02
CPSF2-201ENST00000298875 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
CPSF2-201ENST00000298875 FBN1P35555 2871 aaKnown RBP2.43□□□□□ -2.02
CPSF2-201ENST00000298875 LCE3AQ5TA76 89 aa2.43□□□□□ -2.02
CPSF2-201ENST00000298875 DMDP11532 3685 aa2.42□□□□□ -2.02
CPSF2-201ENST00000298875 SMG1Q96Q15 3661 aaKnown RBP2.41□□□□□ -2.02
CPSF2-201ENST00000298875 ALMS1Q8TCU4 4167 aa2.41□□□□□ -2.02
CPSF2-201ENST00000298875 PKD1L1Q8TDX9 2849 aa2.41□□□□□ -2.02
CPSF2-201ENST00000298875 CSMD2Q7Z408 3487 aa2.39□□□□□ -2.03
CPSF2-201ENST00000298875 HUWE1Q7Z6Z7 4374 aaKnown RBP2.39□□□□□ -2.03
CPSF2-201ENST00000298875 KRTAP10-4P60372 401 aaPredicted RBP2.38□□□□□ -2.03
CPSF2-201ENST00000298875 SVEP1Q4LDE5 3571 aa2.37□□□□□ -2.03
CPSF2-201ENST00000298875 KRTAP10-5P60370 271 aa2.36□□□□□ -2.03
CPSF2-201ENST00000298875 MEGF8Q7Z7M0 2845 aa2.35□□□□□ -2.03
CPSF2-201ENST00000298875 CMYA5Q8N3K9 4069 aa2.34□□□□□ -2.03
CPSF2-201ENST00000298875 DNAH9Q9NYC9 4486 aa2.34□□□□□ -2.04
CPSF2-201ENST00000298875 VWFP04275 2813 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms