RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 CELSR3Q9NYQ7 3312 aa9.18□□□□□ -0.94
SNAPC4-201ENST00000298532 COL12A1Q99715 3063 aa9.17□□□□□ -0.94
SNAPC4-201ENST00000298532 DMXL2Q8TDJ6 3036 aa9.16□□□□□ -0.94
SNAPC4-201ENST00000298532 EYSQ5T1H1 3165 aa9.14□□□□□ -0.95
SNAPC4-201ENST00000298532 A8MUU9 505 aa9.13□□□□□ -0.95
SNAPC4-201ENST00000298532 TACC2O95359 2948 aa9.12□□□□□ -0.95
SNAPC4-201ENST00000298532 ADGRG4Q8IZF6 3080 aa9.12□□□□□ -0.95
SNAPC4-201ENST00000298532 SZT2Q5T011 3432 aa9.11□□□□□ -0.95
SNAPC4-201ENST00000298532 NIPBLQ6KC79 2804 aaeCLIP9.09□□□□□ -0.95
SNAPC4-201ENST00000298532 PLAC4Q8WY50 150 aa9.07□□□□□ -0.96
SNAPC4-201ENST00000298532 LRBAP50851 2863 aa9.05□□□□□ -0.96
SNAPC4-201ENST00000298532 LAMA1P25391 3075 aa9.05□□□□□ -0.96
SNAPC4-201ENST00000298532 COL6A3P12111 3177 aa9.05□□□□□ -0.96
SNAPC4-201ENST00000298532 VCANP13611 3396 aa9□□□□□ -0.97
SNAPC4-201ENST00000298532 C20orf166-AS1Q96NR2 134 aa8.97□□□□□ -0.97
SNAPC4-201ENST00000298532 BOD1L1Q8NFC6 3051 aa8.95□□□□□ -0.98
SNAPC4-201ENST00000298532 CELSR2Q9HCU4 2923 aa8.92□□□□□ -0.98
SNAPC4-201ENST00000298532 ZZEF1O43149 2961 aa8.92□□□□□ -0.98
SNAPC4-201ENST00000298532 DNAH14Q0VDD8 3507 aa8.91□□□□□ -0.98
SNAPC4-201ENST00000298532 H0YAA0 97 aa8.9□□□□□ -0.99
SNAPC4-201ENST00000298532 REV3LO60673 3130 aa8.89□□□□□ -0.99
SNAPC4-201ENST00000298532 DMXL1Q9Y485 3027 aa8.88□□□□□ -0.99
SNAPC4-201ENST00000298532 C10orf95Q9H7T3 257 aa8.82□□□□□ -1
SNAPC4-201ENST00000298532 TNP1P09430 55 aa8.8□□□□□ -1
SNAPC4-201ENST00000298532 ZANQ9Y493 2812 aa8.8□□□□□ -1
SNAPC4-201ENST00000298532 DCHS2Q6V1P9 2916 aa8.78□□□□□ -1
SNAPC4-201ENST00000298532 KRTAP1-4P0C5Y4 121 aa8.76□□□□□ -1.01
SNAPC4-201ENST00000298532 PP632Q6XCG6 107 aa8.76□□□□□ -1.01
SNAPC4-201ENST00000298532 CRYBG3Q68DQ2 2970 aa8.76□□□□□ -1.01
SNAPC4-201ENST00000298532 HRNRQ86YZ3 2850 aaPredicted RBP8.74□□□□□ -1.01
SNAPC4-201ENST00000298532 CFAP47Q6ZTR5 3102 aa8.73□□□□□ -1.01
SNAPC4-201ENST00000298532 P0C880 135 aa8.72□□□□□ -1.01
SNAPC4-201ENST00000298532 A0A1B0GVY2 172 aa8.66□□□□□ -1.02
SNAPC4-201ENST00000298532 SPEGQ15772 3267 aa8.65□□□□□ -1.02
SNAPC4-201ENST00000298532 SPTBN5Q9NRC6 3674 aaKnown RBP8.65□□□□□ -1.02
SNAPC4-201ENST00000298532 MXRA5Q9NR99 2828 aa8.65□□□□□ -1.02
SNAPC4-201ENST00000298532 USP34Q70CQ2 3546 aa8.64□□□□□ -1.03
SNAPC4-201ENST00000298532 NF1P21359 2839 aa8.63□□□□□ -1.03
SNAPC4-201ENST00000298532 KRTAP13-3Q3SY46 172 aa8.62□□□□□ -1.03
SNAPC4-201ENST00000298532 TPRXLQ17RH7 258 aa8.62□□□□□ -1.03
SNAPC4-201ENST00000298532 FBN2P35556 2912 aa8.61□□□□□ -1.03
SNAPC4-201ENST00000298532 XP32Q5T750 250 aa8.59□□□□□ -1.03
SNAPC4-201ENST00000298532 PDZD2O15018 2839 aa8.59□□□□□ -1.04
SNAPC4-201ENST00000298532 TGP01266 2768 aa8.53□□□□□ -1.04
SNAPC4-201ENST00000298532 TENM3Q9P273 2699 aa8.49□□□□□ -1.05
SNAPC4-201ENST00000298532 KRTAP10-8P60410 259 aa8.49□□□□□ -1.05
SNAPC4-201ENST00000298532 TENM2Q9NT68 2774 aa8.49□□□□□ -1.05
SNAPC4-201ENST00000298532 TENM1Q9UKZ4 2725 aa8.44□□□□□ -1.06
SNAPC4-201ENST00000298532 OTOGQ6ZRI0 2925 aa8.35□□□□□ -1.07
SNAPC4-201ENST00000298532 LOC400499M0QZD8 3231 aa8.34□□□□□ -1.07
SNAPC4-201ENST00000298532 MYO15AQ9UKN7 3530 aa8.32□□□□□ -1.08
SNAPC4-201ENST00000298532 CELSR1Q9NYQ6 3014 aa8.31□□□□□ -1.08
SNAPC4-201ENST00000298532 KRTAP12-2P59991 146 aa8.25□□□□□ -1.09
SNAPC4-201ENST00000298532 KRTAP12-1P59990 96 aa8.14□□□□□ -1.11
SNAPC4-201ENST00000298532 KRTAP3-1Q9BYR8 98 aa8.11□□□□□ -1.11
SNAPC4-201ENST00000298532 PKD1L1Q8TDX9 2849 aa8.1□□□□□ -1.11
SNAPC4-201ENST00000298532 KRTAP13-4Q3LI77 160 aa8.08□□□□□ -1.12
SNAPC4-201ENST00000298532 KRTAP10-10P60014 251 aa8.07□□□□□ -1.12
SNAPC4-201ENST00000298532 DCHS1Q96JQ0 3298 aa8.05□□□□□ -1.12
SNAPC4-201ENST00000298532 VWFP04275 2813 aa8.03□□□□□ -1.12
SNAPC4-201ENST00000298532 WDFY3Q8IZQ1 3526 aa8□□□□□ -1.13
SNAPC4-201ENST00000298532 PRO2289Q9P1D8 64 aa7.98□□□□□ -1.13
SNAPC4-201ENST00000298532 ANK3Q12955 4377 aaKnown RBP7.98□□□□□ -1.13
SNAPC4-201ENST00000298532 FBN1P35555 2871 aaKnown RBP7.98□□□□□ -1.13
SNAPC4-201ENST00000298532 RELNP78509 3460 aa7.95□□□□□ -1.14
SNAPC4-201ENST00000298532 KRTAP10-6P60371 365 aaPredicted RBP7.95□□□□□ -1.14
SNAPC4-201ENST00000298532 NBPF19A0A087WUL8 3843 aa7.91□□□□□ -1.14
SNAPC4-201ENST00000298532 ASPMQ8IZT6 3477 aa7.87□□□□□ -1.15
SNAPC4-201ENST00000298532 FBN3Q75N90 2809 aa7.83□□□□□ -1.16
SNAPC4-201ENST00000298532 MUC3AQ02505 3323 aa7.81□□□□□ -1.16
SNAPC4-201ENST00000298532 KRTAP15-1Q3LI76 137 aa7.79□□□□□ -1.16
SNAPC4-201ENST00000298532 MT1HL1P0DM35 61 aa7.79□□□□□ -1.16
SNAPC4-201ENST00000298532 ZFHX3Q15911 3703 aa7.75□□□□□ -1.17
SNAPC4-201ENST00000298532 LAMA5O15230 3695 aa7.74□□□□□ -1.17
SNAPC4-201ENST00000298532 ZFHX4Q86UP3 3567 aa7.73□□□□□ -1.17
SNAPC4-201ENST00000298532 CSMD1Q96PZ7 3565 aa7.73□□□□□ -1.17
SNAPC4-201ENST00000298532 MEGF8Q7Z7M0 2845 aa7.68□□□□□ -1.18
SNAPC4-201ENST00000298532 KRTAP3-2Q9BYR7 98 aa7.66□□□□□ -1.18
SNAPC4-201ENST00000298532 SRRM2Q9UQ35 2752 aaKnown RBP7.65□□□□□ -1.18
SNAPC4-201ENST00000298532 KRTAP10-4P60372 401 aaPredicted RBP7.64□□□□□ -1.19
SNAPC4-201ENST00000298532 KRTAP3-3Q9BYR6 98 aa7.59□□□□□ -1.19
SNAPC4-201ENST00000298532 DMDP11532 3685 aa7.59□□□□□ -1.2
SNAPC4-201ENST00000298532 KRTAP4-5Q9BYR2 181 aa7.55□□□□□ -1.2
SNAPC4-201ENST00000298532 INE1O15225 51 aa7.54□□□□□ -1.2
SNAPC4-201ENST00000298532 ALMS1Q8TCU4 4167 aa7.53□□□□□ -1.2
SNAPC4-201ENST00000298532 SMG1Q96Q15 3661 aaKnown RBP7.53□□□□□ -1.2
SNAPC4-201ENST00000298532 CUBNO60494 3623 aa7.51□□□□□ -1.21
SNAPC4-201ENST00000298532 COL7A1Q02388 2944 aa7.48□□□□□ -1.21
SNAPC4-201ENST00000298532 HUWE1Q7Z6Z7 4374 aaKnown RBP7.41□□□□□ -1.22
SNAPC4-201ENST00000298532 TRRAPQ9Y4A5 3859 aa7.38□□□□□ -1.23
SNAPC4-201ENST00000298532 SVEP1Q4LDE5 3571 aa7.37□□□□□ -1.23
SNAPC4-201ENST00000298532 CSMD2Q7Z408 3487 aa7.29□□□□□ -1.24
SNAPC4-201ENST00000298532 BSNQ9UPA5 3926 aa7.28□□□□□ -1.24
SNAPC4-201ENST00000298532 KRTAP23-1A1A580 65 aa7.26□□□□□ -1.25
SNAPC4-201ENST00000298532 SPENQ96T58 3664 aaKnown RBP7.21□□□□□ -1.25
SNAPC4-201ENST00000298532 DNAH9Q9NYC9 4486 aa7.2□□□□□ -1.26
SNAPC4-201ENST00000298532 KRTAP10-12P60413 245 aa7.19□□□□□ -1.26
SNAPC4-201ENST00000298532 DNAH1Q9P2D7 4330 aa7.11□□□□□ -1.27
SNAPC4-201ENST00000298532 KRTAP12-3P60328 96 aa7.1□□□□□ -1.27
SNAPC4-201ENST00000298532 DNAH11Q96DT5 4516 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms