RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 LUZP6Q538Z0 58 aa9.26□□□□□ -0.93
ARHGEF28-201ENST00000296794 H1FX-AS1Q4G0G2 97 aa9.26□□□□□ -0.93
ARHGEF28-201ENST00000296794 R4GN34 69 aa9.26□□□□□ -0.93
ARHGEF28-201ENST00000296794 RPL37P61927 97 aaKnown RBP9.24□□□□□ -0.93
ARHGEF28-201ENST00000296794 H3BS24 57 aa9.23□□□□□ -0.93
ARHGEF28-201ENST00000296794 SPATA8Q6RVD6 105 aa9.21□□□□□ -0.93
ARHGEF28-201ENST00000296794 ZANQ9Y493 2812 aa9.21□□□□□ -0.93
ARHGEF28-201ENST00000296794 ASB16-AS1Q495Z4 193 aa9.21□□□□□ -0.94
ARHGEF28-201ENST00000296794 KRTAP13-1Q8IUC0 172 aa9.21□□□□□ -0.94
ARHGEF28-201ENST00000296794 USP34Q70CQ2 3546 aa9.2□□□□□ -0.94
ARHGEF28-201ENST00000296794 ROMO1P60602 79 aa9.19□□□□□ -0.94
ARHGEF28-201ENST00000296794 A6NN06 94 aa9.18□□□□□ -0.94
ARHGEF28-201ENST00000296794 EYSQ5T1H1 3165 aa9.18□□□□□ -0.94
ARHGEF28-201ENST00000296794 DCHS2Q6V1P9 2916 aa9.18□□□□□ -0.94
ARHGEF28-201ENST00000296794 A8MU10 97 aa9.15□□□□□ -0.94
ARHGEF28-201ENST00000296794 HRNRQ86YZ3 2850 aaPredicted RBP9.14□□□□□ -0.95
ARHGEF28-201ENST00000296794 TENM3Q9P273 2699 aa9.14□□□□□ -0.95
ARHGEF28-201ENST00000296794 LOC400499M0QZD8 3231 aa9.11□□□□□ -0.95
ARHGEF28-201ENST00000296794 RPS29P62273 56 aaKnown RBP9.11□□□□□ -0.95
ARHGEF28-201ENST00000296794 DMXL1Q9Y485 3027 aa9.1□□□□□ -0.95
ARHGEF28-201ENST00000296794 KRTAP13-2Q52LG2 175 aa9.09□□□□□ -0.95
ARHGEF28-201ENST00000296794 TNRC18O15417 2968 aaPredicted RBP9.04□□□□□ -0.96
ARHGEF28-201ENST00000296794 M0QZ58 72 aa9.04□□□□□ -0.96
ARHGEF28-201ENST00000296794 MYO15AQ9UKN7 3530 aa9.03□□□□□ -0.96
ARHGEF28-201ENST00000296794 ADM2Q7Z4H4 148 aa9.01□□□□□ -0.97
ARHGEF28-201ENST00000296794 NF1P21359 2839 aa9□□□□□ -0.97
ARHGEF28-201ENST00000296794 FBN2P35556 2912 aa8.99□□□□□ -0.97
ARHGEF28-201ENST00000296794 TENM1Q9UKZ4 2725 aa8.97□□□□□ -0.97
ARHGEF28-201ENST00000296794 KRTAP25-1Q3LHN0 102 aa8.93□□□□□ -0.98
ARHGEF28-201ENST00000296794 PLAC4Q8WY50 150 aa8.92□□□□□ -0.98
ARHGEF28-201ENST00000296794 A0A0A0MQY5 61 aa8.85□□□□□ -0.99
ARHGEF28-201ENST00000296794 TENM2Q9NT68 2774 aa8.84□□□□□ -0.99
ARHGEF28-201ENST00000296794 MXRA5Q9NR99 2828 aa8.78□□□□□ -1
ARHGEF28-201ENST00000296794 C20orf166-AS1Q96NR2 134 aa8.77□□□□□ -1.01
ARHGEF28-201ENST00000296794 PKD1L1Q8TDX9 2849 aa8.77□□□□□ -1.01
ARHGEF28-201ENST00000296794 A8MUU9 505 aa8.75□□□□□ -1.01
ARHGEF28-201ENST00000296794 WDFY3Q8IZQ1 3526 aa8.74□□□□□ -1.01
ARHGEF28-201ENST00000296794 RELNP78509 3460 aa8.7□□□□□ -1.02
ARHGEF28-201ENST00000296794 KRTAP1-4P0C5Y4 121 aa8.68□□□□□ -1.02
ARHGEF28-201ENST00000296794 DCHS1Q96JQ0 3298 aa8.64□□□□□ -1.03
ARHGEF28-201ENST00000296794 CELSR1Q9NYQ6 3014 aa8.61□□□□□ -1.03
ARHGEF28-201ENST00000296794 ZFHX4Q86UP3 3567 aa8.61□□□□□ -1.03
ARHGEF28-201ENST00000296794 NDUFAF8A1L188 74 aa8.57□□□□□ -1.04
ARHGEF28-201ENST00000296794 MUC3AQ02505 3323 aa8.57□□□□□ -1.04
ARHGEF28-201ENST00000296794 KRTAP16-1A8MUX0 517 aa8.57□□□□□ -1.04
ARHGEF28-201ENST00000296794 H0YAA0 97 aa8.54□□□□□ -1.04
ARHGEF28-201ENST00000296794 XP32Q5T750 250 aa8.53□□□□□ -1.04
ARHGEF28-201ENST00000296794 VWFP04275 2813 aa8.52□□□□□ -1.05
ARHGEF28-201ENST00000296794 ASPMQ8IZT6 3477 aa8.51□□□□□ -1.05
ARHGEF28-201ENST00000296794 LAMA5O15230 3695 aa8.5□□□□□ -1.05
ARHGEF28-201ENST00000296794 TPRXLQ17RH7 258 aa8.47□□□□□ -1.05
ARHGEF28-201ENST00000296794 TGP01266 2768 aa8.46□□□□□ -1.05
ARHGEF28-201ENST00000296794 DMDP11532 3685 aa8.46□□□□□ -1.05
ARHGEF28-201ENST00000296794 CSMD1Q96PZ7 3565 aa8.43□□□□□ -1.06
ARHGEF28-201ENST00000296794 C10orf95Q9H7T3 257 aa8.43□□□□□ -1.06
ARHGEF28-201ENST00000296794 KRTAP13-3Q3SY46 172 aa8.42□□□□□ -1.06
ARHGEF28-201ENST00000296794 PDZD2O15018 2839 aa8.4□□□□□ -1.06
ARHGEF28-201ENST00000296794 SRRM2Q9UQ35 2752 aaKnown RBP8.37□□□□□ -1.07
ARHGEF28-201ENST00000296794 SMG1Q96Q15 3661 aaKnown RBP8.36□□□□□ -1.07
ARHGEF28-201ENST00000296794 TNP1P09430 55 aa8.36□□□□□ -1.07
ARHGEF28-201ENST00000296794 FBN1P35555 2871 aaKnown RBP8.31□□□□□ -1.08
ARHGEF28-201ENST00000296794 A0A1B0GVY2 172 aa8.3□□□□□ -1.08
ARHGEF28-201ENST00000296794 P0C880 135 aa8.24□□□□□ -1.09
ARHGEF28-201ENST00000296794 KRTAP10-8P60410 259 aa8.24□□□□□ -1.09
ARHGEF28-201ENST00000296794 KRTAP10-10P60014 251 aa8.21□□□□□ -1.09
ARHGEF28-201ENST00000296794 OTOGQ6ZRI0 2925 aa8.2□□□□□ -1.1
ARHGEF28-201ENST00000296794 PP632Q6XCG6 107 aa8.2□□□□□ -1.1
ARHGEF28-201ENST00000296794 SVEP1Q4LDE5 3571 aa8.17□□□□□ -1.1
ARHGEF28-201ENST00000296794 NBPF19A0A087WUL8 3843 aa8.08□□□□□ -1.12
ARHGEF28-201ENST00000296794 ZFHX3Q15911 3703 aa8.07□□□□□ -1.12
ARHGEF28-201ENST00000296794 PRO2289Q9P1D8 64 aa8.04□□□□□ -1.12
ARHGEF28-201ENST00000296794 CUBNO60494 3623 aa8.01□□□□□ -1.13
ARHGEF28-201ENST00000296794 KRTAP12-2P59991 146 aa7.97□□□□□ -1.13
ARHGEF28-201ENST00000296794 KRTAP3-1Q9BYR8 98 aa7.97□□□□□ -1.13
ARHGEF28-201ENST00000296794 FBN3Q75N90 2809 aa7.95□□□□□ -1.14
ARHGEF28-201ENST00000296794 SPENQ96T58 3664 aaKnown RBP7.92□□□□□ -1.14
ARHGEF28-201ENST00000296794 ANK3Q12955 4377 aaKnown RBP7.92□□□□□ -1.14
ARHGEF28-201ENST00000296794 CSMD2Q7Z408 3487 aa7.89□□□□□ -1.15
ARHGEF28-201ENST00000296794 KRTAP12-1P59990 96 aa7.84□□□□□ -1.15
ARHGEF28-201ENST00000296794 COL7A1Q02388 2944 aa7.82□□□□□ -1.16
ARHGEF28-201ENST00000296794 TRRAPQ9Y4A5 3859 aa7.78□□□□□ -1.16
ARHGEF28-201ENST00000296794 MEGF8Q7Z7M0 2845 aa7.76□□□□□ -1.17
ARHGEF28-201ENST00000296794 KRTAP13-4Q3LI77 160 aa7.75□□□□□ -1.17
ARHGEF28-201ENST00000296794 KRTAP10-6P60371 365 aaPredicted RBP7.74□□□□□ -1.17
ARHGEF28-201ENST00000296794 BSNQ9UPA5 3926 aa7.73□□□□□ -1.17
ARHGEF28-201ENST00000296794 MT1HL1P0DM35 61 aa7.58□□□□□ -1.2
ARHGEF28-201ENST00000296794 VPS13CQ709C8 3753 aa7.52□□□□□ -1.2
ARHGEF28-201ENST00000296794 KRTAP3-2Q9BYR7 98 aa7.49□□□□□ -1.21
ARHGEF28-201ENST00000296794 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
ARHGEF28-201ENST00000296794 HUWE1Q7Z6Z7 4374 aaKnown RBP7.45□□□□□ -1.22
ARHGEF28-201ENST00000296794 KRTAP4-5Q9BYR2 181 aa7.39□□□□□ -1.23
ARHGEF28-201ENST00000296794 KRTAP10-4P60372 401 aaPredicted RBP7.35□□□□□ -1.23
ARHGEF28-201ENST00000296794 KRTAP15-1Q3LI76 137 aa7.35□□□□□ -1.23
ARHGEF28-201ENST00000296794 CSMD3Q7Z407 3707 aa7.22□□□□□ -1.25
ARHGEF28-201ENST00000296794 ZNF469Q96JG9 3925 aaPredicted RBP7.15□□□□□ -1.26
ARHGEF28-201ENST00000296794 AKAP9Q99996 3911 aa7.12□□□□□ -1.27
ARHGEF28-201ENST00000296794 DNAH9Q9NYC9 4486 aa7.07□□□□□ -1.28
ARHGEF28-201ENST00000296794 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
ARHGEF28-201ENST00000296794 DNAH5Q8TE73 4624 aa6.99□□□□□ -1.29
ARHGEF28-201ENST00000296794 ALMS1Q8TCU4 4167 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms