RNA–Protein interactions for RNA: ENST00000296440.10

PLXNB1-201, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,143 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-201ENST00000296440 KRTAP13-1Q8IUC0 172 aa6.99□□□□□ -1.29
PLXNB1-201ENST00000296440 COL6A3P12111 3177 aa6.97□□□□□ -1.29
PLXNB1-201ENST00000296440 KRTAP7-1Q8IUC3 87 aa6.96□□□□□ -1.3
PLXNB1-201ENST00000296440 NBEAL2Q6ZNJ1 2754 aa6.94□□□□□ -1.3
PLXNB1-201ENST00000296440 A6NN06 94 aa6.91□□□□□ -1.3
PLXNB1-201ENST00000296440 VCANP13611 3396 aa6.91□□□□□ -1.3
PLXNB1-201ENST00000296440 LAMA1P25391 3075 aa6.91□□□□□ -1.3
PLXNB1-201ENST00000296440 NSD1Q96L73 2696 aaPredicted RBP6.88□□□□□ -1.31
PLXNB1-201ENST00000296440 UBR5O95071 2799 aaPredicted RBP6.88□□□□□ -1.31
PLXNB1-201ENST00000296440 FRYLO94915 3013 aa6.86□□□□□ -1.31
PLXNB1-201ENST00000296440 CFAP47Q6ZTR5 3102 aa6.83□□□□□ -1.32
PLXNB1-201ENST00000296440 KALRNO60229 2985 aa6.83□□□□□ -1.32
PLXNB1-201ENST00000296440 KRTAP1-4P0C5Y4 121 aa6.82□□□□□ -1.32
PLXNB1-201ENST00000296440 KRTAP13-3Q3SY46 172 aa6.81□□□□□ -1.32
PLXNB1-201ENST00000296440 TACC2O95359 2948 aa6.81□□□□□ -1.32
PLXNB1-201ENST00000296440 BOD1L1Q8NFC6 3051 aa6.81□□□□□ -1.32
PLXNB1-201ENST00000296440 LRBAP50851 2863 aa6.8□□□□□ -1.32
PLXNB1-201ENST00000296440 COL12A1Q99715 3063 aa6.8□□□□□ -1.32
PLXNB1-201ENST00000296440 SPEGQ15772 3267 aa6.8□□□□□ -1.32
PLXNB1-201ENST00000296440 ATMQ13315 3056 aa6.79□□□□□ -1.32
PLXNB1-201ENST00000296440 DMXL2Q8TDJ6 3036 aa6.79□□□□□ -1.32
PLXNB1-201ENST00000296440 ITPR1Q14643 2758 aa6.77□□□□□ -1.33
PLXNB1-201ENST00000296440 SPTBN5Q9NRC6 3674 aaKnown RBP6.74□□□□□ -1.33
PLXNB1-201ENST00000296440 USP34Q70CQ2 3546 aa6.74□□□□□ -1.33
PLXNB1-201ENST00000296440 APCP25054 2843 aa6.74□□□□□ -1.33
PLXNB1-201ENST00000296440 UTP20O75691 2785 aaKnown RBP6.74□□□□□ -1.33
PLXNB1-201ENST00000296440 ADGRG4Q8IZF6 3080 aa6.67□□□□□ -1.34
PLXNB1-201ENST00000296440 TNRC18O15417 2968 aaPredicted RBP6.67□□□□□ -1.34
PLXNB1-201ENST00000296440 HIVEP1P15822 2718 aa6.66□□□□□ -1.34
PLXNB1-201ENST00000296440 EYSQ5T1H1 3165 aa6.66□□□□□ -1.34
PLXNB1-201ENST00000296440 TENM4Q6N022 2769 aa6.66□□□□□ -1.34
PLXNB1-201ENST00000296440 FLNCQ14315 2725 aa6.64□□□□□ -1.35
PLXNB1-201ENST00000296440 ASH1LQ9NR48 2969 aaKnown RBP6.63□□□□□ -1.35
PLXNB1-201ENST00000296440 CRCT1Q9UGL9 99 aa6.59□□□□□ -1.35
PLXNB1-201ENST00000296440 NBEAQ8NFP9 2946 aa6.59□□□□□ -1.35
PLXNB1-201ENST00000296440 KRTAP12-2P59991 146 aa6.58□□□□□ -1.36
PLXNB1-201ENST00000296440 H0YAA0 97 aa6.57□□□□□ -1.36
PLXNB1-201ENST00000296440 DMXL1Q9Y485 3027 aa6.56□□□□□ -1.36
PLXNB1-201ENST00000296440 ZZEF1O43149 2961 aa6.56□□□□□ -1.36
PLXNB1-201ENST00000296440 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
PLXNB1-201ENST00000296440 MYO15AQ9UKN7 3530 aa6.54□□□□□ -1.36
PLXNB1-201ENST00000296440 TENM1Q9UKZ4 2725 aa6.54□□□□□ -1.36
PLXNB1-201ENST00000296440 DCHS1Q96JQ0 3298 aa6.52□□□□□ -1.37
PLXNB1-201ENST00000296440 CELSR2Q9HCU4 2923 aa6.51□□□□□ -1.37
PLXNB1-201ENST00000296440 WDFY3Q8IZQ1 3526 aa6.49□□□□□ -1.37
PLXNB1-201ENST00000296440 ASPMQ8IZT6 3477 aa6.46□□□□□ -1.38
PLXNB1-201ENST00000296440 DCHS2Q6V1P9 2916 aa6.43□□□□□ -1.38
PLXNB1-201ENST00000296440 LOC400499M0QZD8 3231 aa6.4□□□□□ -1.38
PLXNB1-201ENST00000296440 TENM2Q9NT68 2774 aa6.39□□□□□ -1.39
PLXNB1-201ENST00000296440 KRTAP13-4Q3LI77 160 aa6.38□□□□□ -1.39
PLXNB1-201ENST00000296440 TENM3Q9P273 2699 aa6.34□□□□□ -1.4
PLXNB1-201ENST00000296440 NBPF19A0A087WUL8 3843 aa6.34□□□□□ -1.4
PLXNB1-201ENST00000296440 ZANQ9Y493 2812 aa6.32□□□□□ -1.4
PLXNB1-201ENST00000296440 NIPBLQ6KC79 2804 aaeCLIP6.31□□□□□ -1.4
PLXNB1-201ENST00000296440 NF1P21359 2839 aa6.3□□□□□ -1.4
PLXNB1-201ENST00000296440 CSMD1Q96PZ7 3565 aa6.3□□□□□ -1.4
PLXNB1-201ENST00000296440 CELSR1Q9NYQ6 3014 aa6.27□□□□□ -1.41
PLXNB1-201ENST00000296440 HRNRQ86YZ3 2850 aaPredicted RBP6.25□□□□□ -1.41
PLXNB1-201ENST00000296440 FBN2P35556 2912 aa6.25□□□□□ -1.41
PLXNB1-201ENST00000296440 RELNP78509 3460 aa6.25□□□□□ -1.41
PLXNB1-201ENST00000296440 ZFHX4Q86UP3 3567 aa6.21□□□□□ -1.42
PLXNB1-201ENST00000296440 LAMA5O15230 3695 aa6.19□□□□□ -1.42
PLXNB1-201ENST00000296440 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
PLXNB1-201ENST00000296440 KRTAP12-1P59990 96 aa6.14□□□□□ -1.43
PLXNB1-201ENST00000296440 PDZD2O15018 2839 aa6.13□□□□□ -1.43
PLXNB1-201ENST00000296440 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
PLXNB1-201ENST00000296440 PKD1L1Q8TDX9 2849 aa6.13□□□□□ -1.43
PLXNB1-201ENST00000296440 TGP01266 2768 aa6.08□□□□□ -1.44
PLXNB1-201ENST00000296440 VWFP04275 2813 aa6.05□□□□□ -1.44
PLXNB1-201ENST00000296440 ZFHX3Q15911 3703 aa6.04□□□□□ -1.44
PLXNB1-201ENST00000296440 KRTAP10-6P60371 365 aaPredicted RBP6.02□□□□□ -1.45
PLXNB1-201ENST00000296440 MXRA5Q9NR99 2828 aa6.01□□□□□ -1.45
PLXNB1-201ENST00000296440 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
PLXNB1-201ENST00000296440 SMG1Q96Q15 3661 aaKnown RBP5.99□□□□□ -1.45
PLXNB1-201ENST00000296440 DMDP11532 3685 aa5.96□□□□□ -1.46
PLXNB1-201ENST00000296440 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
PLXNB1-201ENST00000296440 SVEP1Q4LDE5 3571 aa5.9□□□□□ -1.47
PLXNB1-201ENST00000296440 SPENQ96T58 3664 aaKnown RBP5.87□□□□□ -1.47
PLXNB1-201ENST00000296440 MT1HL1P0DM35 61 aa5.85□□□□□ -1.47
PLXNB1-201ENST00000296440 KRTAP10-5P60370 271 aa5.85□□□□□ -1.47
PLXNB1-201ENST00000296440 FBN3Q75N90 2809 aa5.85□□□□□ -1.47
PLXNB1-201ENST00000296440 CUBNO60494 3623 aa5.83□□□□□ -1.48
PLXNB1-201ENST00000296440 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
PLXNB1-201ENST00000296440 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
PLXNB1-201ENST00000296440 CSMD2Q7Z408 3487 aa5.79□□□□□ -1.48
PLXNB1-201ENST00000296440 MUC3AQ02505 3323 aa5.77□□□□□ -1.49
PLXNB1-201ENST00000296440 FBN1P35555 2871 aaKnown RBP5.76□□□□□ -1.49
PLXNB1-201ENST00000296440 INE1O15225 51 aa5.76□□□□□ -1.49
PLXNB1-201ENST00000296440 ANK3Q12955 4377 aaKnown RBP5.75□□□□□ -1.49
PLXNB1-201ENST00000296440 OTOGQ6ZRI0 2925 aa5.72□□□□□ -1.49
PLXNB1-201ENST00000296440 LCE3AQ5TA76 89 aa5.69□□□□□ -1.5
PLXNB1-201ENST00000296440 TRRAPQ9Y4A5 3859 aa5.65□□□□□ -1.5
PLXNB1-201ENST00000296440 SRRM2Q9UQ35 2752 aaKnown RBP5.65□□□□□ -1.5
PLXNB1-201ENST00000296440 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
PLXNB1-201ENST00000296440 SPRR2FQ96RM1 72 aa5.6□□□□□ -1.51
PLXNB1-201ENST00000296440 COL7A1Q02388 2944 aa5.55□□□□□ -1.52
PLXNB1-201ENST00000296440 MEGF8Q7Z7M0 2845 aa5.55□□□□□ -1.52
PLXNB1-201ENST00000296440 BSNQ9UPA5 3926 aa5.54□□□□□ -1.52
PLXNB1-201ENST00000296440 VPS13CQ709C8 3753 aa5.51□□□□□ -1.53
PLXNB1-201ENST00000296440 HUWE1Q7Z6Z7 4374 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms