RNA–Protein interactions for RNA: ENST00000295628.3

LRRC58-201, Transcript of leucine rich repeat containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC58, Length 7,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58-201ENST00000295628 TRANK1O15050 2925 aa8.92□□□□□ -0.98
LRRC58-201ENST00000295628 ASH1LQ9NR48 2969 aaKnown RBP8.91□□□□□ -0.98
LRRC58-201ENST00000295628 MAP1AP78559 2803 aaPredicted RBP8.91□□□□□ -0.98
LRRC58-201ENST00000295628 UBR5O95071 2799 aaPredicted RBP8.91□□□□□ -0.98
LRRC58-201ENST00000295628 SPEGQ15772 3267 aa8.91□□□□□ -0.98
LRRC58-201ENST00000295628 HTTP42858 3142 aa8.89□□□□□ -0.99
LRRC58-201ENST00000295628 ZNF292O60281 2723 aa8.88□□□□□ -0.99
LRRC58-201ENST00000295628 LRBAP50851 2863 aa8.87□□□□□ -0.99
LRRC58-201ENST00000295628 LAMA1P25391 3075 aa8.86□□□□□ -0.99
LRRC58-201ENST00000295628 IGSF10Q6WRI0 2623 aa8.85□□□□□ -0.99
LRRC58-201ENST00000295628 VCANP13611 3396 aa8.83□□□□□ -1
LRRC58-201ENST00000295628 XP32Q5T750 250 aa8.83□□□□□ -1
LRRC58-201ENST00000295628 COL12A1Q99715 3063 aa8.82□□□□□ -1
LRRC58-201ENST00000295628 SETXQ7Z333 2677 aaKnown RBP8.8□□□□□ -1
LRRC58-201ENST00000295628 DMXL2Q8TDJ6 3036 aa8.8□□□□□ -1
LRRC58-201ENST00000295628 ITPR1Q14643 2758 aa8.78□□□□□ -1
LRRC58-201ENST00000295628 UTP20O75691 2785 aaKnown RBP8.78□□□□□ -1
LRRC58-201ENST00000295628 USP34Q70CQ2 3546 aa8.73□□□□□ -1.01
LRRC58-201ENST00000295628 FRYLO94915 3013 aa8.69□□□□□ -1.02
LRRC58-201ENST00000295628 ATMQ13315 3056 aa8.69□□□□□ -1.02
LRRC58-201ENST00000295628 CHD9Q3L8U1 2897 aa8.61□□□□□ -1.03
LRRC58-201ENST00000295628 BOD1L1Q8NFC6 3051 aa8.6□□□□□ -1.03
LRRC58-201ENST00000295628 HIVEP1P15822 2718 aa8.59□□□□□ -1.03
LRRC58-201ENST00000295628 KRTAP12-2P59991 146 aa8.59□□□□□ -1.03
LRRC58-201ENST00000295628 NBEAQ8NFP9 2946 aa8.57□□□□□ -1.04
LRRC58-201ENST00000295628 TPRXLQ17RH7 258 aa8.55□□□□□ -1.04
LRRC58-201ENST00000295628 ZZEF1O43149 2961 aa8.53□□□□□ -1.04
LRRC58-201ENST00000295628 WDFY3Q8IZQ1 3526 aa8.52□□□□□ -1.05
LRRC58-201ENST00000295628 ASPMQ8IZT6 3477 aa8.5□□□□□ -1.05
LRRC58-201ENST00000295628 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
LRRC58-201ENST00000295628 DCHS1Q96JQ0 3298 aa8.49□□□□□ -1.05
LRRC58-201ENST00000295628 TACC2O95359 2948 aa8.46□□□□□ -1.06
LRRC58-201ENST00000295628 MYO15AQ9UKN7 3530 aa8.45□□□□□ -1.06
LRRC58-201ENST00000295628 ADGRG4Q8IZF6 3080 aa8.45□□□□□ -1.06
LRRC58-201ENST00000295628 LOC400499M0QZD8 3231 aa8.42□□□□□ -1.06
LRRC58-201ENST00000295628 SPTBN5Q9NRC6 3674 aaKnown RBP8.41□□□□□ -1.06
LRRC58-201ENST00000295628 ZFHX4Q86UP3 3567 aa8.4□□□□□ -1.07
LRRC58-201ENST00000295628 DMXL1Q9Y485 3027 aa8.39□□□□□ -1.07
LRRC58-201ENST00000295628 KRTAP15-1Q3LI76 137 aa8.36□□□□□ -1.07
LRRC58-201ENST00000295628 KRTAP13-4Q3LI77 160 aa8.35□□□□□ -1.07
LRRC58-201ENST00000295628 KRTAP13-3Q3SY46 172 aa8.35□□□□□ -1.07
LRRC58-201ENST00000295628 TGP01266 2768 aa8.34□□□□□ -1.07
LRRC58-201ENST00000295628 CELSR2Q9HCU4 2923 aa8.32□□□□□ -1.08
LRRC58-201ENST00000295628 CELSR1Q9NYQ6 3014 aa8.32□□□□□ -1.08
LRRC58-201ENST00000295628 NBPF19A0A087WUL8 3843 aa8.3□□□□□ -1.08
LRRC58-201ENST00000295628 TENM1Q9UKZ4 2725 aa8.3□□□□□ -1.08
LRRC58-201ENST00000295628 TNRC18O15417 2968 aaPredicted RBP8.28□□□□□ -1.08
LRRC58-201ENST00000295628 LAMA5O15230 3695 aa8.25□□□□□ -1.09
LRRC58-201ENST00000295628 TENM3Q9P273 2699 aa8.22□□□□□ -1.09
LRRC58-201ENST00000295628 KRTAP12-1P59990 96 aa8.18□□□□□ -1.1
LRRC58-201ENST00000295628 EYSQ5T1H1 3165 aa8.17□□□□□ -1.1
LRRC58-201ENST00000295628 CRCT1Q9UGL9 99 aa8.16□□□□□ -1.1
LRRC58-201ENST00000295628 CSMD1Q96PZ7 3565 aa8.16□□□□□ -1.1
LRRC58-201ENST00000295628 NF1P21359 2839 aa8.12□□□□□ -1.11
LRRC58-201ENST00000295628 DCHS2Q6V1P9 2916 aa8.09□□□□□ -1.11
LRRC58-201ENST00000295628 KRTAP21-3Q3LHN1 58 aa8.05□□□□□ -1.12
LRRC58-201ENST00000295628 NIPBLQ6KC79 2804 aaeCLIP8.04□□□□□ -1.12
LRRC58-201ENST00000295628 RELNP78509 3460 aa8.03□□□□□ -1.12
LRRC58-201ENST00000295628 INE1O15225 51 aa7.99□□□□□ -1.13
LRRC58-201ENST00000295628 PDZD2O15018 2839 aa7.98□□□□□ -1.13
LRRC58-201ENST00000295628 FLNCQ14315 2725 aa7.93□□□□□ -1.14
LRRC58-201ENST00000295628 ZANQ9Y493 2812 aa7.92□□□□□ -1.14
LRRC58-201ENST00000295628 SMG1Q96Q15 3661 aaKnown RBP7.91□□□□□ -1.14
LRRC58-201ENST00000295628 SPENQ96T58 3664 aaKnown RBP7.9□□□□□ -1.14
LRRC58-201ENST00000295628 FBN2P35556 2912 aa7.89□□□□□ -1.15
LRRC58-201ENST00000295628 TENM4Q6N022 2769 aa7.84□□□□□ -1.15
LRRC58-201ENST00000295628 VWFP04275 2813 aa7.82□□□□□ -1.16
LRRC58-201ENST00000295628 DMDP11532 3685 aa7.81□□□□□ -1.16
LRRC58-201ENST00000295628 SRRM2Q9UQ35 2752 aaKnown RBP7.77□□□□□ -1.16
LRRC58-201ENST00000295628 HRNRQ86YZ3 2850 aaPredicted RBP7.75□□□□□ -1.17
LRRC58-201ENST00000295628 PKD1L1Q8TDX9 2849 aa7.73□□□□□ -1.17
LRRC58-201ENST00000295628 TENM2Q9NT68 2774 aa7.73□□□□□ -1.17
LRRC58-201ENST00000295628 KRTAP3-1Q9BYR8 98 aa7.72□□□□□ -1.17
LRRC58-201ENST00000295628 KRTAP10-12P60413 245 aa7.71□□□□□ -1.18
LRRC58-201ENST00000295628 MXRA5Q9NR99 2828 aa7.69□□□□□ -1.18
LRRC58-201ENST00000295628 SVEP1Q4LDE5 3571 aa7.62□□□□□ -1.19
LRRC58-201ENST00000295628 CUBNO60494 3623 aa7.61□□□□□ -1.19
LRRC58-201ENST00000295628 KRTAP10-6P60371 365 aaPredicted RBP7.58□□□□□ -1.2
LRRC58-201ENST00000295628 ZFHX3Q15911 3703 aa7.57□□□□□ -1.2
LRRC58-201ENST00000295628 KRTAP10-5P60370 271 aa7.48□□□□□ -1.21
LRRC58-201ENST00000295628 MEGF8Q7Z7M0 2845 aa7.45□□□□□ -1.22
LRRC58-201ENST00000295628 COL7A1Q02388 2944 aa7.44□□□□□ -1.22
LRRC58-201ENST00000295628 KRTAP12-3P60328 96 aa7.44□□□□□ -1.22
LRRC58-201ENST00000295628 VPS13CQ709C8 3753 aa7.39□□□□□ -1.23
LRRC58-201ENST00000295628 CSMD3Q7Z407 3707 aa7.37□□□□□ -1.23
LRRC58-201ENST00000295628 MUC3AQ02505 3323 aa7.37□□□□□ -1.23
LRRC58-201ENST00000295628 LCE3AQ5TA76 89 aa7.36□□□□□ -1.23
LRRC58-201ENST00000295628 TRRAPQ9Y4A5 3859 aa7.24□□□□□ -1.25
LRRC58-201ENST00000295628 FBN3Q75N90 2809 aa7.21□□□□□ -1.25
LRRC58-201ENST00000295628 KRTAP3-3Q9BYR6 98 aa7.19□□□□□ -1.26
LRRC58-201ENST00000295628 KRTAP3-2Q9BYR7 98 aa7.19□□□□□ -1.26
LRRC58-201ENST00000295628 CSMD2Q7Z408 3487 aa7.18□□□□□ -1.26
LRRC58-201ENST00000295628 BSNQ9UPA5 3926 aa7.12□□□□□ -1.27
LRRC58-201ENST00000295628 KRTAP8-1Q8IUC2 63 aa7.11□□□□□ -1.27
LRRC58-201ENST00000295628 AKAP9Q99996 3911 aa7.09□□□□□ -1.27
LRRC58-201ENST00000295628 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
LRRC58-201ENST00000295628 OTOGQ6ZRI0 2925 aa7.01□□□□□ -1.29
LRRC58-201ENST00000295628 LORP23490 312 aaPredicted RBP7.01□□□□□ -1.29
LRRC58-201ENST00000295628 MT1HL1P0DM35 61 aa6.94□□□□□ -1.3
LRRC58-201ENST00000295628 FBN1P35555 2871 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms