RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 KRTAP29-1A8MX34 341 aaPredicted RBP10.84□□□□□ -0.67
SIM2-201ENST00000290399 Q5W150 140 aa10.82□□□□□ -0.68
SIM2-201ENST00000290399 CUBNO60494 3623 aa10.81□□□□□ -0.68
SIM2-201ENST00000290399 CDC42SE1Q9NRR8 79 aa10.79□□□□□ -0.68
SIM2-201ENST00000290399 A0A087X002 238 aa10.77□□□□□ -0.68
SIM2-201ENST00000290399 PKD1L1Q8TDX9 2849 aa10.77□□□□□ -0.69
SIM2-201ENST00000290399 ZCCHC13Q8WW36 166 aaKnown RBP10.76□□□□□ -0.69
SIM2-201ENST00000290399 NOTCH2NLQ7Z3S9 236 aa10.72□□□□□ -0.69
SIM2-201ENST00000290399 LINC01558Q9Y6Z2 57 aa10.72□□□□□ -0.69
SIM2-201ENST00000290399 Q75L30 129 aa10.71□□□□□ -0.69
SIM2-201ENST00000290399 LCE6AA0A183 80 aa10.7□□□□□ -0.7
SIM2-201ENST00000290399 KRTAP13-1Q8IUC0 172 aa10.68□□□□□ -0.7
SIM2-201ENST00000290399 Q5VV11 94 aa10.68□□□□□ -0.7
SIM2-201ENST00000290399 KTN1-AS1Q86SY8 53 aa10.68□□□□□ -0.7
SIM2-201ENST00000290399 COX6B2Q6YFQ2 88 aa10.66□□□□□ -0.7
SIM2-201ENST00000290399 NBPF19A0A087WUL8 3843 aa10.65□□□□□ -0.7
SIM2-201ENST00000290399 SPENQ96T58 3664 aaKnown RBP10.64□□□□□ -0.71
SIM2-201ENST00000290399 RBM12B-AS1Q9P1G2 102 aa10.64□□□□□ -0.71
SIM2-201ENST00000290399 CSMD2Q7Z408 3487 aa10.62□□□□□ -0.71
SIM2-201ENST00000290399 TGP01266 2768 aa10.62□□□□□ -0.71
SIM2-201ENST00000290399 SPINK7P58062 85 aa10.62□□□□□ -0.71
SIM2-201ENST00000290399 A0A0D9SG42 100 aa10.61□□□□□ -0.71
SIM2-201ENST00000290399 ZFHX3Q15911 3703 aa10.61□□□□□ -0.71
SIM2-201ENST00000290399 Q6ZSA8 131 aa10.57□□□□□ -0.72
SIM2-201ENST00000290399 A0A1B0GU33 70 aa10.56□□□□□ -0.72
SIM2-201ENST00000290399 TENM2Q9NT68 2774 aa10.55□□□□□ -0.72
SIM2-201ENST00000290399 DMAC1Q96GE9 116 aa10.54□□□□□ -0.72
SIM2-201ENST00000290399 Q5VSD8 79 aa10.53□□□□□ -0.72
SIM2-201ENST00000290399 LINC01554Q52M75 96 aa10.51□□□□□ -0.73
SIM2-201ENST00000290399 KRTAP13-2Q52LG2 175 aa10.51□□□□□ -0.73
SIM2-201ENST00000290399 LCA10Q71F78 164 aa10.5□□□□□ -0.73
SIM2-201ENST00000290399 ASB16-AS1Q495Z4 193 aa10.48□□□□□ -0.73
SIM2-201ENST00000290399 SPINT4Q6UDR6 99 aa10.48□□□□□ -0.73
SIM2-201ENST00000290399 CRIPTQ9P021 101 aa10.43□□□□□ -0.74
SIM2-201ENST00000290399 BSNQ9UPA5 3926 aa10.4□□□□□ -0.74
SIM2-201ENST00000290399 S4R3F8 94 aa10.32□□□□□ -0.76
SIM2-201ENST00000290399 CSAG1Q6PB30 78 aa10.32□□□□□ -0.76
SIM2-201ENST00000290399 PRAC1Q96KF2 57 aa10.32□□□□□ -0.76
SIM2-201ENST00000290399 RPS29P62273 56 aaKnown RBP10.26□□□□□ -0.77
SIM2-201ENST00000290399 KRTAP21-3Q3LHN1 58 aa10.21□□□□□ -0.77
SIM2-201ENST00000290399 TRRAPQ9Y4A5 3859 aa10.19□□□□□ -0.78
SIM2-201ENST00000290399 SRRM2Q9UQ35 2752 aaKnown RBP10.16□□□□□ -0.78
SIM2-201ENST00000290399 SEC61BP60468 96 aaKnown RBP10.15□□□□□ -0.78
SIM2-201ENST00000290399 KRTAP1-4P0C5Y4 121 aa10.15□□□□□ -0.78
SIM2-201ENST00000290399 A8MU10 97 aa10.13□□□□□ -0.79
SIM2-201ENST00000290399 H1FX-AS1Q4G0G2 97 aa10.13□□□□□ -0.79
SIM2-201ENST00000290399 SPATA8Q6RVD6 105 aa10.11□□□□□ -0.79
SIM2-201ENST00000290399 CAMK2N1Q7Z7J9 78 aa10.09□□□□□ -0.79
SIM2-201ENST00000290399 FBN3Q75N90 2809 aa10.08□□□□□ -0.8
SIM2-201ENST00000290399 R4GN34 69 aa10.08□□□□□ -0.8
SIM2-201ENST00000290399 RPL37P61927 97 aaKnown RBP10.08□□□□□ -0.8
SIM2-201ENST00000290399 ANK3Q12955 4377 aaKnown RBP10.07□□□□□ -0.8
SIM2-201ENST00000290399 H3BS24 57 aa10.02□□□□□ -0.8
SIM2-201ENST00000290399 M0R2T5 61 aa10.02□□□□□ -0.81
SIM2-201ENST00000290399 A8MUU9 505 aa9.99□□□□□ -0.81
SIM2-201ENST00000290399 ADM2Q7Z4H4 148 aa9.96□□□□□ -0.81
SIM2-201ENST00000290399 C20orf166-AS1Q96NR2 134 aa9.96□□□□□ -0.81
SIM2-201ENST00000290399 M0QZ58 72 aa9.93□□□□□ -0.82
SIM2-201ENST00000290399 A6NN06 94 aa9.93□□□□□ -0.82
SIM2-201ENST00000290399 ROMO1P60602 79 aa9.89□□□□□ -0.83
SIM2-201ENST00000290399 MEGF8Q7Z7M0 2845 aa9.88□□□□□ -0.83
SIM2-201ENST00000290399 VPS13CQ709C8 3753 aa9.88□□□□□ -0.83
SIM2-201ENST00000290399 KRTAP16-1A8MUX0 517 aa9.85□□□□□ -0.83
SIM2-201ENST00000290399 COL7A1Q02388 2944 aa9.82□□□□□ -0.84
SIM2-201ENST00000290399 XP32Q5T750 250 aa9.72□□□□□ -0.85
SIM2-201ENST00000290399 ZNF469Q96JG9 3925 aaPredicted RBP9.71□□□□□ -0.85
SIM2-201ENST00000290399 LUZP6Q538Z0 58 aa9.69□□□□□ -0.86
SIM2-201ENST00000290399 KRTAP13-3Q3SY46 172 aa9.68□□□□□ -0.86
SIM2-201ENST00000290399 A0A1B0GVY2 172 aa9.59□□□□□ -0.87
SIM2-201ENST00000290399 KRTAP25-1Q3LHN0 102 aa9.58□□□□□ -0.88
SIM2-201ENST00000290399 H0YAA0 97 aa9.5□□□□□ -0.89
SIM2-201ENST00000290399 KRTAP10-8P60410 259 aa9.48□□□□□ -0.89
SIM2-201ENST00000290399 TPRXLQ17RH7 258 aa9.45□□□□□ -0.9
SIM2-201ENST00000290399 PLAC4Q8WY50 150 aa9.42□□□□□ -0.9
SIM2-201ENST00000290399 A0A0A0MQY5 61 aa9.34□□□□□ -0.91
SIM2-201ENST00000290399 P0C880 135 aa9.34□□□□□ -0.91
SIM2-201ENST00000290399 CSMD3Q7Z407 3707 aa9.33□□□□□ -0.92
SIM2-201ENST00000290399 HUWE1Q7Z6Z7 4374 aaKnown RBP9.31□□□□□ -0.92
SIM2-201ENST00000290399 AKAP9Q99996 3911 aa9.24□□□□□ -0.93
SIM2-201ENST00000290399 C10orf95Q9H7T3 257 aa9.23□□□□□ -0.93
SIM2-201ENST00000290399 KRTAP3-1Q9BYR8 98 aa9.2□□□□□ -0.94
SIM2-201ENST00000290399 TNP1P09430 55 aa9.11□□□□□ -0.95
SIM2-201ENST00000290399 NDUFAF8A1L188 74 aa9.05□□□□□ -0.96
SIM2-201ENST00000290399 DNAH9Q9NYC9 4486 aa8.99□□□□□ -0.97
SIM2-201ENST00000290399 KRTAP10-4P60372 401 aaPredicted RBP8.94□□□□□ -0.98
SIM2-201ENST00000290399 KRTAP12-2P59991 146 aa8.9□□□□□ -0.98
SIM2-201ENST00000290399 MT1HL1P0DM35 61 aa8.9□□□□□ -0.98
SIM2-201ENST00000290399 PP632Q6XCG6 107 aa8.88□□□□□ -0.99
SIM2-201ENST00000290399 PLECQ15149 4684 aaKnown RBP8.87□□□□□ -0.99
SIM2-201ENST00000290399 KRTAP10-10P60014 251 aa8.87□□□□□ -0.99
SIM2-201ENST00000290399 DNHD1Q96M86 4753 aa8.86□□□□□ -0.99
SIM2-201ENST00000290399 KRTAP10-6P60371 365 aaPredicted RBP8.84□□□□□ -0.99
SIM2-201ENST00000290399 KRTAP12-1P59990 96 aa8.81□□□□□ -1
SIM2-201ENST00000290399 KRTAP13-4Q3LI77 160 aa8.81□□□□□ -1
SIM2-201ENST00000290399 DNAH11Q96DT5 4516 aa8.77□□□□□ -1.01
SIM2-201ENST00000290399 DNAH10Q8IVF4 4471 aa8.75□□□□□ -1.01
SIM2-201ENST00000290399 DNAH5Q8TE73 4624 aa8.74□□□□□ -1.01
SIM2-201ENST00000290399 DNAH1Q9P2D7 4330 aa8.74□□□□□ -1.01
SIM2-201ENST00000290399 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
SIM2-201ENST00000290399 KRTAP4-5Q9BYR2 181 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms