RNA–Protein interactions for RNA: ENST00000282701.2

BMP3-201, Transcript of bone morphogenetic protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BMP3, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3-201ENST00000282701 FREM2Q5SZK8 3169 aa8.88□□□□□ -0.99
BMP3-201ENST00000282701 PP632Q6XCG6 107 aa8.88□□□□□ -0.99
BMP3-201ENST00000282701 COL6A3P12111 3177 aa8.84□□□□□ -0.99
BMP3-201ENST00000282701 REV3LO60673 3130 aa8.84□□□□□ -0.99
BMP3-201ENST00000282701 ATMQ13315 3056 aa8.82□□□□□ -1
BMP3-201ENST00000282701 LRBAP50851 2863 aa8.82□□□□□ -1
BMP3-201ENST00000282701 ADGRG4Q8IZF6 3080 aa8.82□□□□□ -1
BMP3-201ENST00000282701 BOD1L1Q8NFC6 3051 aa8.81□□□□□ -1
BMP3-201ENST00000282701 FRYLO94915 3013 aa8.8□□□□□ -1
BMP3-201ENST00000282701 HIVEP1P15822 2718 aa8.8□□□□□ -1
BMP3-201ENST00000282701 COL12A1Q99715 3063 aa8.79□□□□□ -1
BMP3-201ENST00000282701 UTP20O75691 2785 aaKnown RBP8.79□□□□□ -1
BMP3-201ENST00000282701 H0YAA0 97 aa8.78□□□□□ -1
BMP3-201ENST00000282701 TENM4Q6N022 2769 aa8.76□□□□□ -1.01
BMP3-201ENST00000282701 KRTAP21-3Q3LHN1 58 aa8.76□□□□□ -1.01
BMP3-201ENST00000282701 KMT2BQ9UMN6 2715 aaPredicted RBP8.76□□□□□ -1.01
BMP3-201ENST00000282701 SPTBN5Q9NRC6 3674 aaKnown RBP8.75□□□□□ -1.01
BMP3-201ENST00000282701 DMXL2Q8TDJ6 3036 aa8.74□□□□□ -1.01
BMP3-201ENST00000282701 XP32Q5T750 250 aa8.72□□□□□ -1.01
BMP3-201ENST00000282701 P0C880 135 aa8.72□□□□□ -1.01
BMP3-201ENST00000282701 KRTAP10-8P60410 259 aa8.72□□□□□ -1.01
BMP3-201ENST00000282701 KRTAP1-4P0C5Y4 121 aa8.7□□□□□ -1.02
BMP3-201ENST00000282701 NIPBLQ6KC79 2804 aaeCLIP8.65□□□□□ -1.02
BMP3-201ENST00000282701 APCP25054 2843 aa8.63□□□□□ -1.03
BMP3-201ENST00000282701 SPEGQ15772 3267 aa8.63□□□□□ -1.03
BMP3-201ENST00000282701 ASH1LQ9NR48 2969 aaKnown RBP8.62□□□□□ -1.03
BMP3-201ENST00000282701 A0A1B0GVY2 172 aa8.61□□□□□ -1.03
BMP3-201ENST00000282701 CRYBG3Q68DQ2 2970 aa8.61□□□□□ -1.03
BMP3-201ENST00000282701 ZZEF1O43149 2961 aa8.56□□□□□ -1.04
BMP3-201ENST00000282701 CELSR2Q9HCU4 2923 aa8.55□□□□□ -1.04
BMP3-201ENST00000282701 USP34Q70CQ2 3546 aa8.54□□□□□ -1.04
BMP3-201ENST00000282701 TNRC18O15417 2968 aaPredicted RBP8.51□□□□□ -1.05
BMP3-201ENST00000282701 CFAP47Q6ZTR5 3102 aa8.51□□□□□ -1.05
BMP3-201ENST00000282701 EYSQ5T1H1 3165 aa8.51□□□□□ -1.05
BMP3-201ENST00000282701 TPRXLQ17RH7 258 aa8.5□□□□□ -1.05
BMP3-201ENST00000282701 HRNRQ86YZ3 2850 aaPredicted RBP8.48□□□□□ -1.05
BMP3-201ENST00000282701 DCHS2Q6V1P9 2916 aa8.45□□□□□ -1.06
BMP3-201ENST00000282701 DMXL1Q9Y485 3027 aa8.42□□□□□ -1.06
BMP3-201ENST00000282701 KRTAP10-10P60014 251 aa8.41□□□□□ -1.06
BMP3-201ENST00000282701 ZANQ9Y493 2812 aa8.4□□□□□ -1.06
BMP3-201ENST00000282701 PRO2289Q9P1D8 64 aa8.39□□□□□ -1.07
BMP3-201ENST00000282701 LOC400499M0QZD8 3231 aa8.39□□□□□ -1.07
BMP3-201ENST00000282701 KRTAP13-3Q3SY46 172 aa8.37□□□□□ -1.07
BMP3-201ENST00000282701 MYO15AQ9UKN7 3530 aa8.35□□□□□ -1.07
BMP3-201ENST00000282701 TENM3Q9P273 2699 aa8.31□□□□□ -1.08
BMP3-201ENST00000282701 NF1P21359 2839 aa8.25□□□□□ -1.09
BMP3-201ENST00000282701 TENM1Q9UKZ4 2725 aa8.24□□□□□ -1.09
BMP3-201ENST00000282701 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
BMP3-201ENST00000282701 FBN2P35556 2912 aa8.21□□□□□ -1.1
BMP3-201ENST00000282701 TENM2Q9NT68 2774 aa8.13□□□□□ -1.11
BMP3-201ENST00000282701 KRTAP13-4Q3LI77 160 aa8.12□□□□□ -1.11
BMP3-201ENST00000282701 WDFY3Q8IZQ1 3526 aa8.08□□□□□ -1.12
BMP3-201ENST00000282701 KRTAP12-1P59990 96 aa8.06□□□□□ -1.12
BMP3-201ENST00000282701 RELNP78509 3460 aa8.03□□□□□ -1.12
BMP3-201ENST00000282701 MXRA5Q9NR99 2828 aa8.02□□□□□ -1.13
BMP3-201ENST00000282701 TGP01266 2768 aa7.99□□□□□ -1.13
BMP3-201ENST00000282701 PKD1L1Q8TDX9 2849 aa7.98□□□□□ -1.13
BMP3-201ENST00000282701 CELSR1Q9NYQ6 3014 aa7.98□□□□□ -1.13
BMP3-201ENST00000282701 ZFHX4Q86UP3 3567 aa7.97□□□□□ -1.13
BMP3-201ENST00000282701 ASPMQ8IZT6 3477 aa7.94□□□□□ -1.14
BMP3-201ENST00000282701 KRTAP3-1Q9BYR8 98 aa7.91□□□□□ -1.14
BMP3-201ENST00000282701 DCHS1Q96JQ0 3298 aa7.89□□□□□ -1.15
BMP3-201ENST00000282701 LAMA5O15230 3695 aa7.87□□□□□ -1.15
BMP3-201ENST00000282701 CSMD1Q96PZ7 3565 aa7.83□□□□□ -1.16
BMP3-201ENST00000282701 VWFP04275 2813 aa7.83□□□□□ -1.16
BMP3-201ENST00000282701 KRTAP15-1Q3LI76 137 aa7.82□□□□□ -1.16
BMP3-201ENST00000282701 DMDP11532 3685 aa7.79□□□□□ -1.16
BMP3-201ENST00000282701 SMG1Q96Q15 3661 aaKnown RBP7.78□□□□□ -1.16
BMP3-201ENST00000282701 PDZD2O15018 2839 aa7.74□□□□□ -1.17
BMP3-201ENST00000282701 KRTAP10-6P60371 365 aaPredicted RBP7.73□□□□□ -1.17
BMP3-201ENST00000282701 NBPF19A0A087WUL8 3843 aa7.61□□□□□ -1.19
BMP3-201ENST00000282701 ANK3Q12955 4377 aaKnown RBP7.59□□□□□ -1.19
BMP3-201ENST00000282701 FBN1P35555 2871 aaKnown RBP7.58□□□□□ -1.2
BMP3-201ENST00000282701 INE1O15225 51 aa7.58□□□□□ -1.2
BMP3-201ENST00000282701 MUC3AQ02505 3323 aa7.56□□□□□ -1.2
BMP3-201ENST00000282701 SRRM2Q9UQ35 2752 aaKnown RBP7.55□□□□□ -1.2
BMP3-201ENST00000282701 SVEP1Q4LDE5 3571 aa7.55□□□□□ -1.2
BMP3-201ENST00000282701 OTOGQ6ZRI0 2925 aa7.52□□□□□ -1.21
BMP3-201ENST00000282701 SPENQ96T58 3664 aaKnown RBP7.43□□□□□ -1.22
BMP3-201ENST00000282701 KRTAP3-2Q9BYR7 98 aa7.42□□□□□ -1.22
BMP3-201ENST00000282701 ZFHX3Q15911 3703 aa7.4□□□□□ -1.22
BMP3-201ENST00000282701 KRTAP10-12P60413 245 aa7.38□□□□□ -1.23
BMP3-201ENST00000282701 KRTAP3-3Q9BYR6 98 aa7.38□□□□□ -1.23
BMP3-201ENST00000282701 BSNQ9UPA5 3926 aa7.38□□□□□ -1.23
BMP3-201ENST00000282701 FBN3Q75N90 2809 aa7.32□□□□□ -1.24
BMP3-201ENST00000282701 CSMD2Q7Z408 3487 aa7.29□□□□□ -1.24
BMP3-201ENST00000282701 CRCT1Q9UGL9 99 aa7.29□□□□□ -1.24
BMP3-201ENST00000282701 MT1HL1P0DM35 61 aa7.27□□□□□ -1.25
BMP3-201ENST00000282701 CUBNO60494 3623 aa7.26□□□□□ -1.25
BMP3-201ENST00000282701 TRRAPQ9Y4A5 3859 aa7.25□□□□□ -1.25
BMP3-201ENST00000282701 MEGF8Q7Z7M0 2845 aa7.21□□□□□ -1.26
BMP3-201ENST00000282701 KRTAP12-3P60328 96 aa7.2□□□□□ -1.26
BMP3-201ENST00000282701 COL7A1Q02388 2944 aa7.2□□□□□ -1.26
BMP3-201ENST00000282701 KRTAP23-1A1A580 65 aa7.16□□□□□ -1.26
BMP3-201ENST00000282701 HUWE1Q7Z6Z7 4374 aaKnown RBP7.15□□□□□ -1.26
BMP3-201ENST00000282701 LCE3AQ5TA76 89 aa7.11□□□□□ -1.27
BMP3-201ENST00000282701 VPS13CQ709C8 3753 aa7.07□□□□□ -1.28
BMP3-201ENST00000282701 KRTAP10-4P60372 401 aaPredicted RBP7.02□□□□□ -1.28
BMP3-201ENST00000282701 KRTAP4-5Q9BYR2 181 aa7□□□□□ -1.29
BMP3-201ENST00000282701 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms