RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 PP632Q6XCG6 107 aa10.55□□□□□ -0.72
CACNA1B-201ENST00000277549 HTTP42858 3142 aa10.53□□□□□ -0.72
CACNA1B-201ENST00000277549 TPRXLQ17RH7 258 aa10.51□□□□□ -0.73
CACNA1B-201ENST00000277549 H0YAA0 97 aa10.48□□□□□ -0.73
CACNA1B-201ENST00000277549 MAP1AP78559 2803 aaPredicted RBP10.47□□□□□ -0.73
CACNA1B-201ENST00000277549 DSPP15924 2871 aaKnown RBP10.44□□□□□ -0.74
CACNA1B-201ENST00000277549 KMT2BQ9UMN6 2715 aaPredicted RBP10.44□□□□□ -0.74
CACNA1B-201ENST00000277549 IGSF10Q6WRI0 2623 aa10.44□□□□□ -0.74
CACNA1B-201ENST00000277549 CHD9Q3L8U1 2897 aa10.42□□□□□ -0.74
CACNA1B-201ENST00000277549 SPTBN5Q9NRC6 3674 aaKnown RBP10.41□□□□□ -0.74
CACNA1B-201ENST00000277549 UBR5O95071 2799 aaPredicted RBP10.37□□□□□ -0.75
CACNA1B-201ENST00000277549 KRTAP13-3Q3SY46 172 aa10.34□□□□□ -0.75
CACNA1B-201ENST00000277549 USP34Q70CQ2 3546 aa10.33□□□□□ -0.76
CACNA1B-201ENST00000277549 NSD1Q96L73 2696 aaPredicted RBP10.31□□□□□ -0.76
CACNA1B-201ENST00000277549 DMXL2Q8TDJ6 3036 aa10.31□□□□□ -0.76
CACNA1B-201ENST00000277549 KALRNO60229 2985 aa10.31□□□□□ -0.76
CACNA1B-201ENST00000277549 CRCT1Q9UGL9 99 aa10.3□□□□□ -0.76
CACNA1B-201ENST00000277549 ASPMQ8IZT6 3477 aa10.28□□□□□ -0.76
CACNA1B-201ENST00000277549 LRBAP50851 2863 aa10.26□□□□□ -0.77
CACNA1B-201ENST00000277549 APCP25054 2843 aa10.24□□□□□ -0.77
CACNA1B-201ENST00000277549 TRANK1O15050 2925 aa10.23□□□□□ -0.77
CACNA1B-201ENST00000277549 ATMQ13315 3056 aa10.21□□□□□ -0.78
CACNA1B-201ENST00000277549 MYO15AQ9UKN7 3530 aa10.18□□□□□ -0.78
CACNA1B-201ENST00000277549 LAMA1P25391 3075 aa10.17□□□□□ -0.78
CACNA1B-201ENST00000277549 KRTAP12-2P59991 146 aa10.17□□□□□ -0.78
CACNA1B-201ENST00000277549 TACC2O95359 2948 aa10.13□□□□□ -0.79
CACNA1B-201ENST00000277549 UTP20O75691 2785 aaKnown RBP10.13□□□□□ -0.79
CACNA1B-201ENST00000277549 HIVEP1P15822 2718 aa10.12□□□□□ -0.79
CACNA1B-201ENST00000277549 NBPF19A0A087WUL8 3843 aa10.11□□□□□ -0.79
CACNA1B-201ENST00000277549 BOD1L1Q8NFC6 3051 aa10.11□□□□□ -0.79
CACNA1B-201ENST00000277549 ASH1LQ9NR48 2969 aaKnown RBP10.1□□□□□ -0.79
CACNA1B-201ENST00000277549 ITPR1Q14643 2758 aa10.07□□□□□ -0.8
CACNA1B-201ENST00000277549 EYSQ5T1H1 3165 aa10.03□□□□□ -0.8
CACNA1B-201ENST00000277549 FRYLO94915 3013 aa10.01□□□□□ -0.81
CACNA1B-201ENST00000277549 TENM4Q6N022 2769 aa10□□□□□ -0.81
CACNA1B-201ENST00000277549 FLNCQ14315 2725 aa9.99□□□□□ -0.81
CACNA1B-201ENST00000277549 KRTAP15-1Q3LI76 137 aa9.98□□□□□ -0.81
CACNA1B-201ENST00000277549 COL12A1Q99715 3063 aa9.95□□□□□ -0.82
CACNA1B-201ENST00000277549 WDFY3Q8IZQ1 3526 aa9.94□□□□□ -0.82
CACNA1B-201ENST00000277549 LOC400499M0QZD8 3231 aa9.92□□□□□ -0.82
CACNA1B-201ENST00000277549 DCHS1Q96JQ0 3298 aa9.88□□□□□ -0.83
CACNA1B-201ENST00000277549 ADGRG4Q8IZF6 3080 aa9.84□□□□□ -0.83
CACNA1B-201ENST00000277549 TENM1Q9UKZ4 2725 aa9.8□□□□□ -0.84
CACNA1B-201ENST00000277549 ZFHX4Q86UP3 3567 aa9.8□□□□□ -0.84
CACNA1B-201ENST00000277549 CELSR2Q9HCU4 2923 aa9.77□□□□□ -0.84
CACNA1B-201ENST00000277549 KRTAP13-4Q3LI77 160 aa9.77□□□□□ -0.85
CACNA1B-201ENST00000277549 ZZEF1O43149 2961 aa9.74□□□□□ -0.85
CACNA1B-201ENST00000277549 TENM2Q9NT68 2774 aa9.72□□□□□ -0.85
CACNA1B-201ENST00000277549 LAMA5O15230 3695 aa9.67□□□□□ -0.86
CACNA1B-201ENST00000277549 KRTAP12-1P59990 96 aa9.65□□□□□ -0.87
CACNA1B-201ENST00000277549 NBEAQ8NFP9 2946 aa9.59□□□□□ -0.87
CACNA1B-201ENST00000277549 DCHS2Q6V1P9 2916 aa9.59□□□□□ -0.87
CACNA1B-201ENST00000277549 CSMD1Q96PZ7 3565 aa9.58□□□□□ -0.88
CACNA1B-201ENST00000277549 RELNP78509 3460 aa9.53□□□□□ -0.88
CACNA1B-201ENST00000277549 NF1P21359 2839 aa9.51□□□□□ -0.89
CACNA1B-201ENST00000277549 TNRC18O15417 2968 aaPredicted RBP9.49□□□□□ -0.89
CACNA1B-201ENST00000277549 DMXL1Q9Y485 3027 aa9.48□□□□□ -0.89
CACNA1B-201ENST00000277549 TENM3Q9P273 2699 aa9.43□□□□□ -0.9
CACNA1B-201ENST00000277549 NIPBLQ6KC79 2804 aaeCLIP9.43□□□□□ -0.9
CACNA1B-201ENST00000277549 CELSR1Q9NYQ6 3014 aa9.43□□□□□ -0.9
CACNA1B-201ENST00000277549 KRTAP3-1Q9BYR8 98 aa9.37□□□□□ -0.91
CACNA1B-201ENST00000277549 PKD1L1Q8TDX9 2849 aa9.36□□□□□ -0.91
CACNA1B-201ENST00000277549 LORP23490 312 aaPredicted RBP9.34□□□□□ -0.91
CACNA1B-201ENST00000277549 KRTAP4-5Q9BYR2 181 aa9.32□□□□□ -0.92
CACNA1B-201ENST00000277549 TGP01266 2768 aa9.32□□□□□ -0.92
CACNA1B-201ENST00000277549 KRTAP10-12P60413 245 aa9.29□□□□□ -0.92
CACNA1B-201ENST00000277549 ZFHX3Q15911 3703 aa9.27□□□□□ -0.93
CACNA1B-201ENST00000277549 VWFP04275 2813 aa9.25□□□□□ -0.93
CACNA1B-201ENST00000277549 SPENQ96T58 3664 aaKnown RBP9.22□□□□□ -0.93
CACNA1B-201ENST00000277549 PDZD2O15018 2839 aa9.21□□□□□ -0.94
CACNA1B-201ENST00000277549 SMG1Q96Q15 3661 aaKnown RBP9.2□□□□□ -0.94
CACNA1B-201ENST00000277549 ZANQ9Y493 2812 aa9.19□□□□□ -0.94
CACNA1B-201ENST00000277549 DMDP11532 3685 aa9.18□□□□□ -0.94
CACNA1B-201ENST00000277549 FBN2P35556 2912 aa9.17□□□□□ -0.94
CACNA1B-201ENST00000277549 KRTAP10-6P60371 365 aaPredicted RBP9.03□□□□□ -0.96
CACNA1B-201ENST00000277549 SVEP1Q4LDE5 3571 aa9.03□□□□□ -0.96
CACNA1B-201ENST00000277549 HRNRQ86YZ3 2850 aaPredicted RBP9.01□□□□□ -0.97
CACNA1B-201ENST00000277549 CSMD2Q7Z408 3487 aa9□□□□□ -0.97
CACNA1B-201ENST00000277549 KRTAP10-5P60370 271 aa8.99□□□□□ -0.97
CACNA1B-201ENST00000277549 CUBNO60494 3623 aa8.98□□□□□ -0.97
CACNA1B-201ENST00000277549 MT1HL1P0DM35 61 aa8.96□□□□□ -0.98
CACNA1B-201ENST00000277549 MUC3AQ02505 3323 aa8.94□□□□□ -0.98
CACNA1B-201ENST00000277549 LCE3AQ5TA76 89 aa8.93□□□□□ -0.98
CACNA1B-201ENST00000277549 ANK3Q12955 4377 aaKnown RBP8.91□□□□□ -0.98
CACNA1B-201ENST00000277549 KRTAP12-3P60328 96 aa8.9□□□□□ -0.98
CACNA1B-201ENST00000277549 KRTAP8-1Q8IUC2 63 aa8.87□□□□□ -0.99
CACNA1B-201ENST00000277549 MXRA5Q9NR99 2828 aa8.78□□□□□ -1
CACNA1B-201ENST00000277549 INE1O15225 51 aa8.76□□□□□ -1.01
CACNA1B-201ENST00000277549 HUWE1Q7Z6Z7 4374 aaKnown RBP8.71□□□□□ -1.02
CACNA1B-201ENST00000277549 SRRM2Q9UQ35 2752 aaKnown RBP8.7□□□□□ -1.02
CACNA1B-201ENST00000277549 KRTAP3-3Q9BYR6 98 aa8.68□□□□□ -1.02
CACNA1B-201ENST00000277549 CSMD3Q7Z407 3707 aa8.66□□□□□ -1.02
CACNA1B-201ENST00000277549 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
CACNA1B-201ENST00000277549 TRRAPQ9Y4A5 3859 aa8.62□□□□□ -1.03
CACNA1B-201ENST00000277549 ALMS1Q8TCU4 4167 aa8.56□□□□□ -1.04
CACNA1B-201ENST00000277549 VPS13CQ709C8 3753 aa8.55□□□□□ -1.04
CACNA1B-201ENST00000277549 FBN3Q75N90 2809 aa8.53□□□□□ -1.04
CACNA1B-201ENST00000277549 COL7A1Q02388 2944 aa8.51□□□□□ -1.05
CACNA1B-201ENST00000277549 MEGF8Q7Z7M0 2845 aa8.47□□□□□ -1.05
CACNA1B-201ENST00000277549 FBN1P35555 2871 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms