RNA–Protein interactions for RNA: ENST00000275493.6

EGFR-201, Transcript of epidermal growth factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGFR, Length 9,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-201ENST00000275493 TRIOO75962 3097 aa5.59□□□□□ -1.51
EGFR-201ENST00000275493 H0YAA0 97 aa5.59□□□□□ -1.52
EGFR-201ENST00000275493 TENM4Q6N022 2769 aa5.58□□□□□ -1.52
EGFR-201ENST00000275493 BRCA2P51587 3418 aa5.55□□□□□ -1.52
EGFR-201ENST00000275493 P0C880 135 aa5.54□□□□□ -1.52
EGFR-201ENST00000275493 LRBAP50851 2863 aa5.53□□□□□ -1.52
EGFR-201ENST00000275493 NIPBLQ6KC79 2804 aaeCLIP5.51□□□□□ -1.53
EGFR-201ENST00000275493 UNC80Q8N2C7 3258 aa5.5□□□□□ -1.53
EGFR-201ENST00000275493 LAMA1P25391 3075 aa5.47□□□□□ -1.53
EGFR-201ENST00000275493 XIRP2A4UGR9 3374 aa5.46□□□□□ -1.53
EGFR-201ENST00000275493 TACC2O95359 2948 aa5.46□□□□□ -1.53
EGFR-201ENST00000275493 LAMA2P24043 3122 aaKnown RBP5.45□□□□□ -1.54
EGFR-201ENST00000275493 ATMQ13315 3056 aa5.45□□□□□ -1.54
EGFR-201ENST00000275493 REV3LO60673 3130 aa5.45□□□□□ -1.54
EGFR-201ENST00000275493 CDH23Q9H251 3354 aa5.43□□□□□ -1.54
EGFR-201ENST00000275493 KALRNO60229 2985 aa5.43□□□□□ -1.54
EGFR-201ENST00000275493 VPS13AQ96RL7 3174 aa5.42□□□□□ -1.54
EGFR-201ENST00000275493 COL12A1Q99715 3063 aa5.41□□□□□ -1.54
EGFR-201ENST00000275493 FRYLO94915 3013 aa5.4□□□□□ -1.55
EGFR-201ENST00000275493 EYSQ5T1H1 3165 aa5.39□□□□□ -1.55
EGFR-201ENST00000275493 NBEAQ8NFP9 2946 aa5.35□□□□□ -1.55
EGFR-201ENST00000275493 TENM2Q9NT68 2774 aa5.35□□□□□ -1.55
EGFR-201ENST00000275493 CELSR3Q9NYQ7 3312 aa5.34□□□□□ -1.55
EGFR-201ENST00000275493 KRTAP12-2P59991 146 aa5.34□□□□□ -1.55
EGFR-201ENST00000275493 DMXL2Q8TDJ6 3036 aa5.31□□□□□ -1.56
EGFR-201ENST00000275493 TENM1Q9UKZ4 2725 aa5.31□□□□□ -1.56
EGFR-201ENST00000275493 COL6A3P12111 3177 aa5.31□□□□□ -1.56
EGFR-201ENST00000275493 SZT2Q5T011 3432 aa5.31□□□□□ -1.56
EGFR-201ENST00000275493 ASH1LQ9NR48 2969 aaKnown RBP5.3□□□□□ -1.56
EGFR-201ENST00000275493 KRTAP13-4Q3LI77 160 aa5.3□□□□□ -1.56
EGFR-201ENST00000275493 TNRC18O15417 2968 aaPredicted RBP5.3□□□□□ -1.56
EGFR-201ENST00000275493 HRNRQ86YZ3 2850 aaPredicted RBP5.29□□□□□ -1.56
EGFR-201ENST00000275493 CELSR2Q9HCU4 2923 aa5.29□□□□□ -1.56
EGFR-201ENST00000275493 USP34Q70CQ2 3546 aa5.28□□□□□ -1.56
EGFR-201ENST00000275493 DCHS2Q6V1P9 2916 aa5.26□□□□□ -1.57
EGFR-201ENST00000275493 SPTBN5Q9NRC6 3674 aaKnown RBP5.26□□□□□ -1.57
EGFR-201ENST00000275493 BOD1L1Q8NFC6 3051 aa5.25□□□□□ -1.57
EGFR-201ENST00000275493 ZZEF1O43149 2961 aa5.25□□□□□ -1.57
EGFR-201ENST00000275493 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
EGFR-201ENST00000275493 TENM3Q9P273 2699 aa5.23□□□□□ -1.57
EGFR-201ENST00000275493 ZANQ9Y493 2812 aa5.23□□□□□ -1.57
EGFR-201ENST00000275493 FREM2Q5SZK8 3169 aa5.22□□□□□ -1.57
EGFR-201ENST00000275493 NF1P21359 2839 aa5.22□□□□□ -1.57
EGFR-201ENST00000275493 DNAH14Q0VDD8 3507 aa5.2□□□□□ -1.58
EGFR-201ENST00000275493 ADGRG4Q8IZF6 3080 aa5.2□□□□□ -1.58
EGFR-201ENST00000275493 MXRA5Q9NR99 2828 aa5.2□□□□□ -1.58
EGFR-201ENST00000275493 CFAP47Q6ZTR5 3102 aa5.19□□□□□ -1.58
EGFR-201ENST00000275493 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
EGFR-201ENST00000275493 VCANP13611 3396 aa5.18□□□□□ -1.58
EGFR-201ENST00000275493 TGP01266 2768 aa5.14□□□□□ -1.59
EGFR-201ENST00000275493 KRTAP3-1Q9BYR8 98 aa5.11□□□□□ -1.59
EGFR-201ENST00000275493 DMXL1Q9Y485 3027 aa5.08□□□□□ -1.6
EGFR-201ENST00000275493 CRCT1Q9UGL9 99 aa5.06□□□□□ -1.6
EGFR-201ENST00000275493 CELSR1Q9NYQ6 3014 aa5.05□□□□□ -1.6
EGFR-201ENST00000275493 MT1HL1P0DM35 61 aa5.05□□□□□ -1.6
EGFR-201ENST00000275493 SPEGQ15772 3267 aa5.04□□□□□ -1.6
EGFR-201ENST00000275493 FBN2P35556 2912 aa5.02□□□□□ -1.61
EGFR-201ENST00000275493 NBPF19A0A087WUL8 3843 aa5.01□□□□□ -1.61
EGFR-201ENST00000275493 KRTAP10-12P60413 245 aa5□□□□□ -1.61
EGFR-201ENST00000275493 PKD1L1Q8TDX9 2849 aa4.99□□□□□ -1.61
EGFR-201ENST00000275493 VWFP04275 2813 aa4.99□□□□□ -1.61
EGFR-201ENST00000275493 KRTAP4-5Q9BYR2 181 aa4.98□□□□□ -1.61
EGFR-201ENST00000275493 PDZD2O15018 2839 aa4.95□□□□□ -1.62
EGFR-201ENST00000275493 KRTAP10-6P60371 365 aaPredicted RBP4.94□□□□□ -1.62
EGFR-201ENST00000275493 ALMS1Q8TCU4 4167 aa4.94□□□□□ -1.62
EGFR-201ENST00000275493 ANK3Q12955 4377 aaKnown RBP4.86□□□□□ -1.63
EGFR-201ENST00000275493 WDFY3Q8IZQ1 3526 aa4.85□□□□□ -1.63
EGFR-201ENST00000275493 KRTAP10-4P60372 401 aaPredicted RBP4.81□□□□□ -1.64
EGFR-201ENST00000275493 ASPMQ8IZT6 3477 aa4.81□□□□□ -1.64
EGFR-201ENST00000275493 OTOGQ6ZRI0 2925 aa4.78□□□□□ -1.64
EGFR-201ENST00000275493 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
EGFR-201ENST00000275493 KRTAP3-3Q9BYR6 98 aa4.77□□□□□ -1.65
EGFR-201ENST00000275493 LOC400499M0QZD8 3231 aa4.76□□□□□ -1.65
EGFR-201ENST00000275493 KRTAP3-2Q9BYR7 98 aa4.75□□□□□ -1.65
EGFR-201ENST00000275493 MYO15AQ9UKN7 3530 aa4.75□□□□□ -1.65
EGFR-201ENST00000275493 KRTAP8-1Q8IUC2 63 aa4.75□□□□□ -1.65
EGFR-201ENST00000275493 RELNP78509 3460 aa4.73□□□□□ -1.65
EGFR-201ENST00000275493 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
EGFR-201ENST00000275493 INE1O15225 51 aa4.71□□□□□ -1.66
EGFR-201ENST00000275493 HUWE1Q7Z6Z7 4374 aaKnown RBP4.71□□□□□ -1.66
EGFR-201ENST00000275493 ZFHX3Q15911 3703 aa4.71□□□□□ -1.66
EGFR-201ENST00000275493 FBN1P35555 2871 aaKnown RBP4.7□□□□□ -1.66
EGFR-201ENST00000275493 LORP23490 312 aaPredicted RBP4.68□□□□□ -1.66
EGFR-201ENST00000275493 FBN3Q75N90 2809 aa4.67□□□□□ -1.66
EGFR-201ENST00000275493 DCHS1Q96JQ0 3298 aa4.65□□□□□ -1.67
EGFR-201ENST00000275493 ZFHX4Q86UP3 3567 aa4.64□□□□□ -1.67
EGFR-201ENST00000275493 MEGF8Q7Z7M0 2845 aa4.61□□□□□ -1.67
EGFR-201ENST00000275493 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
EGFR-201ENST00000275493 SRRM2Q9UQ35 2752 aaKnown RBP4.59□□□□□ -1.68
EGFR-201ENST00000275493 LAMA5O15230 3695 aa4.58□□□□□ -1.68
EGFR-201ENST00000275493 KRTAP10-5P60370 271 aa4.57□□□□□ -1.68
EGFR-201ENST00000275493 DMDP11532 3685 aa4.57□□□□□ -1.68
EGFR-201ENST00000275493 TRRAPQ9Y4A5 3859 aa4.55□□□□□ -1.68
EGFR-201ENST00000275493 MT1HP80294 61 aa4.51□□□□□ -1.69
EGFR-201ENST00000275493 CSMD1Q96PZ7 3565 aa4.5□□□□□ -1.69
EGFR-201ENST00000275493 COL7A1Q02388 2944 aa4.49□□□□□ -1.69
EGFR-201ENST00000275493 SMG1Q96Q15 3661 aaKnown RBP4.42□□□□□ -1.7
EGFR-201ENST00000275493 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
EGFR-201ENST00000275493 KRTAP4-1Q9BYQ7 146 aa4.42□□□□□ -1.7
EGFR-201ENST00000275493 SPENQ96T58 3664 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms