RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 KRTAP25-1Q3LHN0 102 aa6.53□□□□□ -1.36
SHPRH-201ENST00000275233 ATMQ13315 3056 aa6.51□□□□□ -1.37
SHPRH-201ENST00000275233 SPTBN5Q9NRC6 3674 aaKnown RBP6.49□□□□□ -1.37
SHPRH-201ENST00000275233 COL12A1Q99715 3063 aa6.48□□□□□ -1.37
SHPRH-201ENST00000275233 FRYLO94915 3013 aa6.48□□□□□ -1.37
SHPRH-201ENST00000275233 NSD1Q96L73 2696 aaPredicted RBP6.47□□□□□ -1.37
SHPRH-201ENST00000275233 APCP25054 2843 aa6.47□□□□□ -1.37
SHPRH-201ENST00000275233 ASH1LQ9NR48 2969 aaKnown RBP6.47□□□□□ -1.37
SHPRH-201ENST00000275233 TNP1P09430 55 aa6.46□□□□□ -1.38
SHPRH-201ENST00000275233 ITPR1Q14643 2758 aa6.46□□□□□ -1.38
SHPRH-201ENST00000275233 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
SHPRH-201ENST00000275233 USP34Q70CQ2 3546 aa6.45□□□□□ -1.38
SHPRH-201ENST00000275233 UTP20O75691 2785 aaKnown RBP6.45□□□□□ -1.38
SHPRH-201ENST00000275233 ADGRG4Q8IZF6 3080 aa6.44□□□□□ -1.38
SHPRH-201ENST00000275233 A6NN06 94 aa6.44□□□□□ -1.38
SHPRH-201ENST00000275233 HIVEP1P15822 2718 aa6.42□□□□□ -1.38
SHPRH-201ENST00000275233 KMT2BQ9UMN6 2715 aaPredicted RBP6.42□□□□□ -1.38
SHPRH-201ENST00000275233 KRTAP10-8P60410 259 aa6.42□□□□□ -1.38
SHPRH-201ENST00000275233 KRTAP16-1A8MUX0 517 aa6.4□□□□□ -1.39
SHPRH-201ENST00000275233 NDUFAF8A1L188 74 aa6.4□□□□□ -1.39
SHPRH-201ENST00000275233 XP32Q5T750 250 aa6.37□□□□□ -1.39
SHPRH-201ENST00000275233 KRTAP21-3Q3LHN1 58 aa6.36□□□□□ -1.39
SHPRH-201ENST00000275233 NBEAQ8NFP9 2946 aa6.35□□□□□ -1.39
SHPRH-201ENST00000275233 EYSQ5T1H1 3165 aa6.34□□□□□ -1.39
SHPRH-201ENST00000275233 ZZEF1O43149 2961 aa6.32□□□□□ -1.4
SHPRH-201ENST00000275233 KRTAP1-4P0C5Y4 121 aa6.31□□□□□ -1.4
SHPRH-201ENST00000275233 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
SHPRH-201ENST00000275233 MYO15AQ9UKN7 3530 aa6.27□□□□□ -1.41
SHPRH-201ENST00000275233 CELSR2Q9HCU4 2923 aa6.26□□□□□ -1.41
SHPRH-201ENST00000275233 FLNCQ14315 2725 aa6.23□□□□□ -1.41
SHPRH-201ENST00000275233 DMXL1Q9Y485 3027 aa6.21□□□□□ -1.42
SHPRH-201ENST00000275233 TENM4Q6N022 2769 aa6.2□□□□□ -1.42
SHPRH-201ENST00000275233 TNRC18O15417 2968 aaPredicted RBP6.19□□□□□ -1.42
SHPRH-201ENST00000275233 TPRXLQ17RH7 258 aa6.18□□□□□ -1.42
SHPRH-201ENST00000275233 H0YAA0 97 aa6.17□□□□□ -1.42
SHPRH-201ENST00000275233 ASPMQ8IZT6 3477 aa6.17□□□□□ -1.42
SHPRH-201ENST00000275233 DCHS2Q6V1P9 2916 aa6.16□□□□□ -1.42
SHPRH-201ENST00000275233 LOC400499M0QZD8 3231 aa6.16□□□□□ -1.42
SHPRH-201ENST00000275233 WDFY3Q8IZQ1 3526 aa6.14□□□□□ -1.43
SHPRH-201ENST00000275233 P0C880 135 aa6.1□□□□□ -1.43
SHPRH-201ENST00000275233 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
SHPRH-201ENST00000275233 KRTAP13-3Q3SY46 172 aa6.1□□□□□ -1.43
SHPRH-201ENST00000275233 PRO2289Q9P1D8 64 aa6.08□□□□□ -1.44
SHPRH-201ENST00000275233 DCHS1Q96JQ0 3298 aa6.04□□□□□ -1.44
SHPRH-201ENST00000275233 NBPF19A0A087WUL8 3843 aa6.04□□□□□ -1.44
SHPRH-201ENST00000275233 ZANQ9Y493 2812 aa6.03□□□□□ -1.44
SHPRH-201ENST00000275233 CELSR1Q9NYQ6 3014 aa6.03□□□□□ -1.44
SHPRH-201ENST00000275233 RELNP78509 3460 aa6.02□□□□□ -1.45
SHPRH-201ENST00000275233 HRNRQ86YZ3 2850 aaPredicted RBP6.02□□□□□ -1.45
SHPRH-201ENST00000275233 TENM1Q9UKZ4 2725 aa6.02□□□□□ -1.45
SHPRH-201ENST00000275233 FBN2P35556 2912 aa6.02□□□□□ -1.45
SHPRH-201ENST00000275233 NIPBLQ6KC79 2804 aaeCLIP6.01□□□□□ -1.45
SHPRH-201ENST00000275233 TENM2Q9NT68 2774 aa6.01□□□□□ -1.45
SHPRH-201ENST00000275233 NF1P21359 2839 aa5.98□□□□□ -1.45
SHPRH-201ENST00000275233 ZFHX4Q86UP3 3567 aa5.96□□□□□ -1.46
SHPRH-201ENST00000275233 CSMD1Q96PZ7 3565 aa5.92□□□□□ -1.46
SHPRH-201ENST00000275233 LAMA5O15230 3695 aa5.89□□□□□ -1.47
SHPRH-201ENST00000275233 KRTAP12-2P59991 146 aa5.88□□□□□ -1.47
SHPRH-201ENST00000275233 TGP01266 2768 aa5.85□□□□□ -1.47
SHPRH-201ENST00000275233 TENM3Q9P273 2699 aa5.82□□□□□ -1.48
SHPRH-201ENST00000275233 PKD1L1Q8TDX9 2849 aa5.81□□□□□ -1.48
SHPRH-201ENST00000275233 VWFP04275 2813 aa5.77□□□□□ -1.49
SHPRH-201ENST00000275233 MXRA5Q9NR99 2828 aa5.73□□□□□ -1.49
SHPRH-201ENST00000275233 DMDP11532 3685 aa5.72□□□□□ -1.49
SHPRH-201ENST00000275233 SMG1Q96Q15 3661 aaKnown RBP5.71□□□□□ -1.5
SHPRH-201ENST00000275233 KRTAP13-4Q3LI77 160 aa5.69□□□□□ -1.5
SHPRH-201ENST00000275233 KRTAP12-1P59990 96 aa5.69□□□□□ -1.5
SHPRH-201ENST00000275233 ZFHX3Q15911 3703 aa5.69□□□□□ -1.5
SHPRH-201ENST00000275233 PDZD2O15018 2839 aa5.65□□□□□ -1.51
SHPRH-201ENST00000275233 KRTAP3-1Q9BYR8 98 aa5.64□□□□□ -1.51
SHPRH-201ENST00000275233 SVEP1Q4LDE5 3571 aa5.63□□□□□ -1.51
SHPRH-201ENST00000275233 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
SHPRH-201ENST00000275233 SPENQ96T58 3664 aaKnown RBP5.6□□□□□ -1.51
SHPRH-201ENST00000275233 ANK3Q12955 4377 aaKnown RBP5.58□□□□□ -1.52
SHPRH-201ENST00000275233 CSMD2Q7Z408 3487 aa5.57□□□□□ -1.52
SHPRH-201ENST00000275233 CUBNO60494 3623 aa5.56□□□□□ -1.52
SHPRH-201ENST00000275233 CRCT1Q9UGL9 99 aa5.54□□□□□ -1.52
SHPRH-201ENST00000275233 FBN1P35555 2871 aaKnown RBP5.47□□□□□ -1.53
SHPRH-201ENST00000275233 KRTAP10-6P60371 365 aaPredicted RBP5.45□□□□□ -1.54
SHPRH-201ENST00000275233 TRRAPQ9Y4A5 3859 aa5.44□□□□□ -1.54
SHPRH-201ENST00000275233 KRTAP4-5Q9BYR2 181 aa5.43□□□□□ -1.54
SHPRH-201ENST00000275233 MUC3AQ02505 3323 aa5.42□□□□□ -1.54
SHPRH-201ENST00000275233 MT1HL1P0DM35 61 aa5.41□□□□□ -1.54
SHPRH-201ENST00000275233 FBN3Q75N90 2809 aa5.39□□□□□ -1.55
SHPRH-201ENST00000275233 OTOGQ6ZRI0 2925 aa5.38□□□□□ -1.55
SHPRH-201ENST00000275233 MEGF8Q7Z7M0 2845 aa5.36□□□□□ -1.55
SHPRH-201ENST00000275233 SRRM2Q9UQ35 2752 aaKnown RBP5.36□□□□□ -1.55
SHPRH-201ENST00000275233 HUWE1Q7Z6Z7 4374 aaKnown RBP5.35□□□□□ -1.55
SHPRH-201ENST00000275233 KRTAP10-12P60413 245 aa5.33□□□□□ -1.56
SHPRH-201ENST00000275233 BSNQ9UPA5 3926 aa5.33□□□□□ -1.56
SHPRH-201ENST00000275233 COL7A1Q02388 2944 aa5.31□□□□□ -1.56
SHPRH-201ENST00000275233 VPS13CQ709C8 3753 aa5.3□□□□□ -1.56
SHPRH-201ENST00000275233 KRTAP3-3Q9BYR6 98 aa5.27□□□□□ -1.57
SHPRH-201ENST00000275233 KRTAP3-2Q9BYR7 98 aa5.23□□□□□ -1.57
SHPRH-201ENST00000275233 CSMD3Q7Z407 3707 aa5.2□□□□□ -1.58
SHPRH-201ENST00000275233 ALMS1Q8TCU4 4167 aa5.17□□□□□ -1.58
SHPRH-201ENST00000275233 KRTAP10-4P60372 401 aaPredicted RBP5.17□□□□□ -1.58
SHPRH-201ENST00000275233 LCE3AQ5TA76 89 aa5.15□□□□□ -1.58
SHPRH-201ENST00000275233 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
SHPRH-201ENST00000275233 LORP23490 312 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms