RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 DEFB116Q30KQ4 102 aa3.58□□□□□ -1.84
CDKAL1-201ENST00000274695 SMR3AQ99954 134 aa3.58□□□□□ -1.84
CDKAL1-201ENST00000274695 PLECQ15149 4684 aaKnown RBP3.57□□□□□ -1.84
CDKAL1-201ENST00000274695 FBN1P35555 2871 aaKnown RBP3.57□□□□□ -1.84
CDKAL1-201ENST00000274695 NSD1Q96L73 2696 aaPredicted RBP3.57□□□□□ -1.84
CDKAL1-201ENST00000274695 SPACA4Q8TDM5 124 aa3.57□□□□□ -1.84
CDKAL1-201ENST00000274695 SACSQ9NZJ4 4579 aa3.57□□□□□ -1.84
CDKAL1-201ENST00000274695 J3QKU1 62 aa3.57□□□□□ -1.84
CDKAL1-201ENST00000274695 Q5W150 140 aa3.56□□□□□ -1.84
CDKAL1-201ENST00000274695 HRES1P13985 223 aa3.55□□□□□ -1.84
CDKAL1-201ENST00000274695 APLNQ9ULZ1 77 aa3.55□□□□□ -1.84
CDKAL1-201ENST00000274695 A8MU10 97 aa3.55□□□□□ -1.84
CDKAL1-201ENST00000274695 DMAC1Q96GE9 116 aa3.55□□□□□ -1.84
CDKAL1-201ENST00000274695 POLQO75417 2590 aa3.54□□□□□ -1.84
CDKAL1-201ENST00000274695 PKHD1L1Q86WI1 4243 aa3.54□□□□□ -1.84
CDKAL1-201ENST00000274695 PRLHP81277 87 aa3.54□□□□□ -1.84
CDKAL1-201ENST00000274695 DNAH11Q96DT5 4516 aa3.54□□□□□ -1.84
CDKAL1-201ENST00000274695 WFDC13Q8IUB5 93 aa3.54□□□□□ -1.84
CDKAL1-201ENST00000274695 TEP1Q99973 2627 aaKnown RBP3.54□□□□□ -1.84
CDKAL1-201ENST00000274695 MRPL34Q9BQ48 92 aaKnown RBP3.53□□□□□ -1.84
CDKAL1-201ENST00000274695 NBEAL2Q6ZNJ1 2754 aa3.53□□□□□ -1.84
CDKAL1-201ENST00000274695 PKHD1P08F94 4074 aa3.53□□□□□ -1.84
CDKAL1-201ENST00000274695 C7orf65Q6ZTY9 151 aa3.53□□□□□ -1.84
CDKAL1-201ENST00000274695 SPG11Q96JI7 2443 aa3.53□□□□□ -1.84
CDKAL1-201ENST00000274695 MYO18BQ8IUG5 2567 aa3.53□□□□□ -1.84
CDKAL1-201ENST00000274695 PKD1L1Q8TDX9 2849 aa3.53□□□□□ -1.84
CDKAL1-201ENST00000274695 PKD1P98161 4303 aa3.52□□□□□ -1.85
CDKAL1-201ENST00000274695 TENM3Q9P273 2699 aa3.52□□□□□ -1.85
CDKAL1-201ENST00000274695 A0A0G2JQZ4 141 aa3.52□□□□□ -1.85
CDKAL1-201ENST00000274695 PRR15LQ9BU68 103 aa3.52□□□□□ -1.85
CDKAL1-201ENST00000274695 FBN3Q75N90 2809 aa3.51□□□□□ -1.85
CDKAL1-201ENST00000274695 KRTAP19-1Q8IUB9 90 aa3.51□□□□□ -1.85
CDKAL1-201ENST00000274695 UNC79Q9P2D8 2635 aa3.51□□□□□ -1.85
CDKAL1-201ENST00000274695 DNAH5Q8TE73 4624 aa3.51□□□□□ -1.85
CDKAL1-201ENST00000274695 C2CD3Q4AC94 2353 aa3.51□□□□□ -1.85
CDKAL1-201ENST00000274695 SPATA8Q6RVD6 105 aa3.5□□□□□ -1.85
CDKAL1-201ENST00000274695 CHKB-CPT1BH3BT56 60 aa3.5□□□□□ -1.85
CDKAL1-201ENST00000274695 ABCA12Q86UK0 2595 aa3.5□□□□□ -1.85
CDKAL1-201ENST00000274695 STARD9Q9P2P6 4700 aa3.5□□□□□ -1.85
CDKAL1-201ENST00000274695 RTL8CO15255 209 aa3.5□□□□□ -1.85
CDKAL1-201ENST00000274695 K7EIL1 84 aa3.49□□□□□ -1.85
CDKAL1-201ENST00000274695 HIVEP2P31629 2446 aa3.48□□□□□ -1.85
CDKAL1-201ENST00000274695 BAHCC1Q9P281 2608 aa3.48□□□□□ -1.85
CDKAL1-201ENST00000274695 ITPR2Q14571 2701 aa3.48□□□□□ -1.85
CDKAL1-201ENST00000274695 ZFYVE26Q68DK2 2539 aa3.47□□□□□ -1.85
CDKAL1-201ENST00000274695 SPINK7P58062 85 aa3.46□□□□□ -1.85
CDKAL1-201ENST00000274695 SONP18583 2426 aaKnown RBP3.46□□□□□ -1.86
CDKAL1-201ENST00000274695 FAT2Q9NYQ8 4349 aa3.46□□□□□ -1.86
CDKAL1-201ENST00000274695 ACACBO00763 2458 aa3.46□□□□□ -1.86
CDKAL1-201ENST00000274695 MAST4O15021 2626 aa3.45□□□□□ -1.86
CDKAL1-201ENST00000274695 FN1P02751 2386 aaKnown RBP3.45□□□□□ -1.86
CDKAL1-201ENST00000274695 NBDYA0A0U1RRE5 68 aa3.45□□□□□ -1.86
CDKAL1-201ENST00000274695 ACYP2P14621 99 aa3.45□□□□□ -1.86
CDKAL1-201ENST00000274695 SSBP3-AS1Q7Z2R9 100 aa3.45□□□□□ -1.86
CDKAL1-201ENST00000274695 KRTAP9-3Q9BYQ3 159 aa3.45□□□□□ -1.86
CDKAL1-201ENST00000274695 COL7A1Q02388 2944 aa3.45□□□□□ -1.86
CDKAL1-201ENST00000274695 CCDC168Q8NDH2 2452 aa3.43□□□□□ -1.86
CDKAL1-201ENST00000274695 NOTCH2Q04721 2471 aa3.43□□□□□ -1.86
CDKAL1-201ENST00000274695 KMT2AQ03164 3969 aa3.43□□□□□ -1.86
CDKAL1-201ENST00000274695 RPS29P62273 56 aaKnown RBP3.43□□□□□ -1.86
CDKAL1-201ENST00000274695 HECTD1Q9ULT8 2610 aa3.42□□□□□ -1.86
CDKAL1-201ENST00000274695 PSORS1C2Q9UIG4 136 aa3.41□□□□□ -1.86
CDKAL1-201ENST00000274695 A0A087WTM6 91 aa3.41□□□□□ -1.86
CDKAL1-201ENST00000274695 Q6ZSA8 131 aa3.41□□□□□ -1.86
CDKAL1-201ENST00000274695 SPAG11AQ6PDA7 123 aa3.41□□□□□ -1.86
CDKAL1-201ENST00000274695 NUPR2A6NF83 97 aa3.4□□□□□ -1.86
CDKAL1-201ENST00000274695 KRTAP25-1Q3LHN0 102 aa3.4□□□□□ -1.87
CDKAL1-201ENST00000274695 SETD2Q9BYW2 2564 aaPredicted RBP3.39□□□□□ -1.87
CDKAL1-201ENST00000274695 IGLV7-43P04211 117 aa3.39□□□□□ -1.87
CDKAL1-201ENST00000274695 PCOTHQ58A44 107 aa3.39□□□□□ -1.87
CDKAL1-201ENST00000274695 APOBP04114 4563 aaKnown RBP3.39□□□□□ -1.87
CDKAL1-201ENST00000274695 FAM208BQ5VWN6 2430 aa3.39□□□□□ -1.87
CDKAL1-201ENST00000274695 HSPG2P98160 4391 aa3.38□□□□□ -1.87
CDKAL1-201ENST00000274695 SRRM2Q9UQ35 2752 aaKnown RBP3.38□□□□□ -1.87
CDKAL1-201ENST00000274695 TNXBP22105 4242 aa3.38□□□□□ -1.87
CDKAL1-201ENST00000274695 VPS13BQ7Z7G8 4022 aa3.37□□□□□ -1.87
CDKAL1-201ENST00000274695 KRTAP1-4P0C5Y4 121 aa3.35□□□□□ -1.87
CDKAL1-201ENST00000274695 KRTAP13-2Q52LG2 175 aa3.35□□□□□ -1.87
CDKAL1-201ENST00000274695 RETNLBQ9BQ08 111 aa3.35□□□□□ -1.87
CDKAL1-201ENST00000274695 ACANP16112 2415 aa3.35□□□□□ -1.87
CDKAL1-201ENST00000274695 A0A1B0GU33 70 aa3.35□□□□□ -1.87
CDKAL1-201ENST00000274695 ANAPC11Q9NYG5 84 aa3.35□□□□□ -1.87
CDKAL1-201ENST00000274695 HELZ2Q9BYK8 2649 aaKnown RBP3.34□□□□□ -1.87
CDKAL1-201ENST00000274695 UQCR11O14957 56 aa3.34□□□□□ -1.88
CDKAL1-201ENST00000274695 MTORP42345 2549 aa3.34□□□□□ -1.88
CDKAL1-201ENST00000274695 LRP1BQ9NZR2 4599 aa3.33□□□□□ -1.88
CDKAL1-201ENST00000274695 SPTSSBQ8NFR3 76 aa3.32□□□□□ -1.88
CDKAL1-201ENST00000274695 A0A1B0GU69 56 aa3.32□□□□□ -1.88
CDKAL1-201ENST00000274695 MIR22HGQ0VDD5 57 aa3.31□□□□□ -1.88
CDKAL1-201ENST00000274695 LY6G6CO95867 125 aa3.31□□□□□ -1.88
CDKAL1-201ENST00000274695 ROMO1P60602 79 aa3.31□□□□□ -1.88
CDKAL1-201ENST00000274695 UBE2DNLQ8IWF7 75 aa3.31□□□□□ -1.88
CDKAL1-201ENST00000274695 FLNBO75369 2602 aaKnown RBP3.31□□□□□ -1.88
CDKAL1-201ENST00000274695 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
CDKAL1-201ENST00000274695 ATRQ13535 2644 aa3.3□□□□□ -1.88
CDKAL1-201ENST00000274695 FASNP49327 2511 aaKnown RBP3.3□□□□□ -1.88
CDKAL1-201ENST00000274695 R4GN34 69 aa3.3□□□□□ -1.88
CDKAL1-201ENST00000274695 C1orf134Q5TEV5 83 aa3.29□□□□□ -1.88
CDKAL1-201ENST00000274695 C20orf166-AS1Q96NR2 134 aa3.29□□□□□ -1.88
CDKAL1-201ENST00000274695 LCE1AQ5T7P2 110 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms