RNA–Protein interactions for RNA: ENST00000266544.9

NDUFA9-201, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA9, Length 8,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-201ENST00000266544 TENM3Q9P273 2699 aa4.4□□□□□ -1.71
NDUFA9-201ENST00000266544 REV3LO60673 3130 aa4.39□□□□□ -1.71
NDUFA9-201ENST00000266544 DMDP11532 3685 aa4.39□□□□□ -1.71
NDUFA9-201ENST00000266544 LRBAP50851 2863 aa4.39□□□□□ -1.71
NDUFA9-201ENST00000266544 EYSQ5T1H1 3165 aa4.39□□□□□ -1.71
NDUFA9-201ENST00000266544 CFAP54Q96N23 3096 aa4.39□□□□□ -1.71
NDUFA9-201ENST00000266544 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
NDUFA9-201ENST00000266544 XP32Q5T750 250 aa4.37□□□□□ -1.71
NDUFA9-201ENST00000266544 TGP01266 2768 aa4.36□□□□□ -1.71
NDUFA9-201ENST00000266544 LAMA1P25391 3075 aa4.34□□□□□ -1.72
NDUFA9-201ENST00000266544 ASPMQ8IZT6 3477 aa4.32□□□□□ -1.72
NDUFA9-201ENST00000266544 DCHS1Q96JQ0 3298 aa4.31□□□□□ -1.72
NDUFA9-201ENST00000266544 DSPP15924 2871 aaKnown RBP4.3□□□□□ -1.72
NDUFA9-201ENST00000266544 KRTAP13-3Q3SY46 172 aa4.29□□□□□ -1.72
NDUFA9-201ENST00000266544 KRTAP1-4P0C5Y4 121 aa4.28□□□□□ -1.72
NDUFA9-201ENST00000266544 NIPBLQ6KC79 2804 aaeCLIP4.27□□□□□ -1.73
NDUFA9-201ENST00000266544 KRTAP12-2P59991 146 aa4.27□□□□□ -1.73
NDUFA9-201ENST00000266544 FREM2Q5SZK8 3169 aa4.27□□□□□ -1.73
NDUFA9-201ENST00000266544 FRYQ5TBA9 3013 aa4.27□□□□□ -1.73
NDUFA9-201ENST00000266544 TRANK1O15050 2925 aa4.25□□□□□ -1.73
NDUFA9-201ENST00000266544 SPENQ96T58 3664 aaKnown RBP4.24□□□□□ -1.73
NDUFA9-201ENST00000266544 RELNP78509 3460 aa4.24□□□□□ -1.73
NDUFA9-201ENST00000266544 ZFHX4Q86UP3 3567 aa4.24□□□□□ -1.73
NDUFA9-201ENST00000266544 FRYLO94915 3013 aa4.23□□□□□ -1.73
NDUFA9-201ENST00000266544 PRUNE2Q8WUY3 3088 aa4.23□□□□□ -1.73
NDUFA9-201ENST00000266544 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
NDUFA9-201ENST00000266544 KALRNO60229 2985 aa4.23□□□□□ -1.73
NDUFA9-201ENST00000266544 KRTAP10-10P60014 251 aa4.23□□□□□ -1.73
NDUFA9-201ENST00000266544 MGAQ8IWI9 3026 aa4.22□□□□□ -1.73
NDUFA9-201ENST00000266544 TENM1Q9UKZ4 2725 aa4.22□□□□□ -1.73
NDUFA9-201ENST00000266544 LAMA5O15230 3695 aa4.2□□□□□ -1.74
NDUFA9-201ENST00000266544 ASH1LQ9NR48 2969 aaKnown RBP4.2□□□□□ -1.74
NDUFA9-201ENST00000266544 CFAP47Q6ZTR5 3102 aa4.2□□□□□ -1.74
NDUFA9-201ENST00000266544 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
NDUFA9-201ENST00000266544 HTTP42858 3142 aa4.19□□□□□ -1.74
NDUFA9-201ENST00000266544 TRIOO75962 3097 aa4.19□□□□□ -1.74
NDUFA9-201ENST00000266544 HIVEP1P15822 2718 aa4.18□□□□□ -1.74
NDUFA9-201ENST00000266544 ZFHX3Q15911 3703 aa4.17□□□□□ -1.74
NDUFA9-201ENST00000266544 CHD9Q3L8U1 2897 aa4.17□□□□□ -1.74
NDUFA9-201ENST00000266544 WDFY4Q6ZS81 3184 aa4.17□□□□□ -1.74
NDUFA9-201ENST00000266544 CSMD1Q96PZ7 3565 aa4.17□□□□□ -1.74
NDUFA9-201ENST00000266544 LOC400499M0QZD8 3231 aa4.16□□□□□ -1.74
NDUFA9-201ENST00000266544 NF1P21359 2839 aa4.16□□□□□ -1.74
NDUFA9-201ENST00000266544 PDZD2O15018 2839 aa4.13□□□□□ -1.75
NDUFA9-201ENST00000266544 SMG1Q96Q15 3661 aaKnown RBP4.13□□□□□ -1.75
NDUFA9-201ENST00000266544 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
NDUFA9-201ENST00000266544 KRTAP21-3Q3LHN1 58 aa4.12□□□□□ -1.75
NDUFA9-201ENST00000266544 A0A1B0GVY2 172 aa4.11□□□□□ -1.75
NDUFA9-201ENST00000266544 CHD7Q9P2D1 2997 aa4.11□□□□□ -1.75
NDUFA9-201ENST00000266544 CELSR2Q9HCU4 2923 aa4.1□□□□□ -1.75
NDUFA9-201ENST00000266544 FLNCQ14315 2725 aa4.09□□□□□ -1.75
NDUFA9-201ENST00000266544 SRRM2Q9UQ35 2752 aaKnown RBP4.07□□□□□ -1.76
NDUFA9-201ENST00000266544 COL12A1Q99715 3063 aa4.06□□□□□ -1.76
NDUFA9-201ENST00000266544 NBEAQ8NFP9 2946 aa4.06□□□□□ -1.76
NDUFA9-201ENST00000266544 SVEP1Q4LDE5 3571 aa4.03□□□□□ -1.76
NDUFA9-201ENST00000266544 TENM2Q9NT68 2774 aa4.02□□□□□ -1.77
NDUFA9-201ENST00000266544 DMXL2Q8TDJ6 3036 aa4.01□□□□□ -1.77
NDUFA9-201ENST00000266544 CRYBG3Q68DQ2 2970 aa4□□□□□ -1.77
NDUFA9-201ENST00000266544 BOD1L1Q8NFC6 3051 aa3.99□□□□□ -1.77
NDUFA9-201ENST00000266544 MUC3AQ02505 3323 aa3.98□□□□□ -1.77
NDUFA9-201ENST00000266544 DCHS2Q6V1P9 2916 aa3.98□□□□□ -1.77
NDUFA9-201ENST00000266544 KRTAP10-6P60371 365 aaPredicted RBP3.97□□□□□ -1.77
NDUFA9-201ENST00000266544 CUBNO60494 3623 aa3.96□□□□□ -1.78
NDUFA9-201ENST00000266544 TACC2O95359 2948 aa3.96□□□□□ -1.78
NDUFA9-201ENST00000266544 TENM4Q6N022 2769 aa3.95□□□□□ -1.78
NDUFA9-201ENST00000266544 CSMD2Q7Z408 3487 aa3.94□□□□□ -1.78
NDUFA9-201ENST00000266544 KRTAP3-1Q9BYR8 98 aa3.92□□□□□ -1.78
NDUFA9-201ENST00000266544 TNRC18O15417 2968 aaPredicted RBP3.92□□□□□ -1.78
NDUFA9-201ENST00000266544 ATMQ13315 3056 aa3.91□□□□□ -1.78
NDUFA9-201ENST00000266544 ZZEF1O43149 2961 aa3.9□□□□□ -1.79
NDUFA9-201ENST00000266544 VPS13CQ709C8 3753 aa3.89□□□□□ -1.79
NDUFA9-201ENST00000266544 DMXL1Q9Y485 3027 aa3.89□□□□□ -1.79
NDUFA9-201ENST00000266544 CELSR1Q9NYQ6 3014 aa3.88□□□□□ -1.79
NDUFA9-201ENST00000266544 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
NDUFA9-201ENST00000266544 ZANQ9Y493 2812 aa3.86□□□□□ -1.79
NDUFA9-201ENST00000266544 ADGRG4Q8IZF6 3080 aa3.83□□□□□ -1.8
NDUFA9-201ENST00000266544 PKD1L1Q8TDX9 2849 aa3.81□□□□□ -1.8
NDUFA9-201ENST00000266544 FBN2P35556 2912 aa3.8□□□□□ -1.8
NDUFA9-201ENST00000266544 KRTAP12-3P60328 96 aa3.78□□□□□ -1.8
NDUFA9-201ENST00000266544 MXRA5Q9NR99 2828 aa3.77□□□□□ -1.81
NDUFA9-201ENST00000266544 BSNQ9UPA5 3926 aa3.77□□□□□ -1.81
NDUFA9-201ENST00000266544 MEGF8Q7Z7M0 2845 aa3.76□□□□□ -1.81
NDUFA9-201ENST00000266544 KRTAP3-2Q9BYR7 98 aa3.76□□□□□ -1.81
NDUFA9-201ENST00000266544 VWFP04275 2813 aa3.74□□□□□ -1.81
NDUFA9-201ENST00000266544 HRNRQ86YZ3 2850 aaPredicted RBP3.73□□□□□ -1.81
NDUFA9-201ENST00000266544 COL7A1Q02388 2944 aa3.71□□□□□ -1.81
NDUFA9-201ENST00000266544 AKAP9Q99996 3911 aa3.7□□□□□ -1.82
NDUFA9-201ENST00000266544 KRTAP3-3Q9BYR6 98 aa3.69□□□□□ -1.82
NDUFA9-201ENST00000266544 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
NDUFA9-201ENST00000266544 FBN3Q75N90 2809 aa3.62□□□□□ -1.83
NDUFA9-201ENST00000266544 NBPF19A0A087WUL8 3843 aa3.62□□□□□ -1.83
NDUFA9-201ENST00000266544 LCE3AQ5TA76 89 aa3.59□□□□□ -1.84
NDUFA9-201ENST00000266544 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
NDUFA9-201ENST00000266544 CRCT1Q9UGL9 99 aa3.54□□□□□ -1.84
NDUFA9-201ENST00000266544 OTOGQ6ZRI0 2925 aa3.52□□□□□ -1.85
NDUFA9-201ENST00000266544 CSMD3Q7Z407 3707 aa3.48□□□□□ -1.85
NDUFA9-201ENST00000266544 ALMS1Q8TCU4 4167 aa3.45□□□□□ -1.86
NDUFA9-201ENST00000266544 TRRAPQ9Y4A5 3859 aa3.42□□□□□ -1.86
NDUFA9-201ENST00000266544 ZNF469Q96JG9 3925 aaPredicted RBP3.42□□□□□ -1.86
NDUFA9-201ENST00000266544 MT1HL1P0DM35 61 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms