RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 TENM3Q9P273 2699 aa9.95□□□□□ -0.82
SCAP-201ENST00000265565 TENM4Q6N022 2769 aa9.92□□□□□ -0.82
SCAP-201ENST00000265565 A0A087X002 238 aa9.92□□□□□ -0.82
SCAP-201ENST00000265565 LCE6AA0A183 80 aa9.92□□□□□ -0.82
SCAP-201ENST00000265565 NOTCH2NLQ7Z3S9 236 aa9.92□□□□□ -0.82
SCAP-201ENST00000265565 A8MU10 97 aa9.91□□□□□ -0.82
SCAP-201ENST00000265565 SPINT4Q6UDR6 99 aa9.88□□□□□ -0.83
SCAP-201ENST00000265565 Q6ZR54 194 aa9.86□□□□□ -0.83
SCAP-201ENST00000265565 SPENQ96T58 3664 aaKnown RBP9.84□□□□□ -0.83
SCAP-201ENST00000265565 TENM1Q9UKZ4 2725 aa9.84□□□□□ -0.83
SCAP-201ENST00000265565 A0A0D9SG42 100 aa9.84□□□□□ -0.83
SCAP-201ENST00000265565 VWFP04275 2813 aa9.83□□□□□ -0.84
SCAP-201ENST00000265565 PDZD2O15018 2839 aa9.83□□□□□ -0.84
SCAP-201ENST00000265565 LINC00483Q53H64 154 aa9.81□□□□□ -0.84
SCAP-201ENST00000265565 LINC01554Q52M75 96 aa9.79□□□□□ -0.84
SCAP-201ENST00000265565 A0A1B0GU33 70 aa9.79□□□□□ -0.84
SCAP-201ENST00000265565 DMAC1Q96GE9 116 aa9.76□□□□□ -0.85
SCAP-201ENST00000265565 FBN1P35555 2871 aaKnown RBP9.73□□□□□ -0.85
SCAP-201ENST00000265565 CSAG1Q6PB30 78 aa9.73□□□□□ -0.85
SCAP-201ENST00000265565 KRTAP10-2P60368 255 aa9.72□□□□□ -0.85
SCAP-201ENST00000265565 CRIPTQ9P021 101 aa9.7□□□□□ -0.86
SCAP-201ENST00000265565 KRTAP10-1P60331 282 aa9.66□□□□□ -0.86
SCAP-201ENST00000265565 Q6ZRN7 208 aaPredicted RBP9.66□□□□□ -0.86
SCAP-201ENST00000265565 KRTAP13-1Q8IUC0 172 aa9.65□□□□□ -0.87
SCAP-201ENST00000265565 A6NN06 94 aa9.63□□□□□ -0.87
SCAP-201ENST00000265565 PKD1L1Q8TDX9 2849 aa9.61□□□□□ -0.87
SCAP-201ENST00000265565 OTOGQ6ZRI0 2925 aa9.56□□□□□ -0.88
SCAP-201ENST00000265565 ADM2Q7Z4H4 148 aa9.55□□□□□ -0.88
SCAP-201ENST00000265565 CSMD2Q7Z408 3487 aa9.55□□□□□ -0.88
SCAP-201ENST00000265565 SPATA8Q6RVD6 105 aa9.52□□□□□ -0.88
SCAP-201ENST00000265565 H3BS24 57 aa9.49□□□□□ -0.89
SCAP-201ENST00000265565 TGP01266 2768 aa9.49□□□□□ -0.89
SCAP-201ENST00000265565 KRTAP13-2Q52LG2 175 aa9.47□□□□□ -0.89
SCAP-201ENST00000265565 TENM2Q9NT68 2774 aa9.46□□□□□ -0.89
SCAP-201ENST00000265565 ASB16-AS1Q495Z4 193 aa9.43□□□□□ -0.9
SCAP-201ENST00000265565 NBPF19A0A087WUL8 3843 aa9.42□□□□□ -0.9
SCAP-201ENST00000265565 H1FX-AS1Q4G0G2 97 aa9.4□□□□□ -0.9
SCAP-201ENST00000265565 ZFHX3Q15911 3703 aa9.35□□□□□ -0.91
SCAP-201ENST00000265565 COX6B2Q6YFQ2 88 aa9.35□□□□□ -0.91
SCAP-201ENST00000265565 RPL37P61927 97 aaKnown RBP9.34□□□□□ -0.91
SCAP-201ENST00000265565 Q6ZSA8 131 aa9.33□□□□□ -0.92
SCAP-201ENST00000265565 BSNQ9UPA5 3926 aa9.33□□□□□ -0.92
SCAP-201ENST00000265565 S4R3F8 94 aa9.33□□□□□ -0.92
SCAP-201ENST00000265565 SRRM2Q9UQ35 2752 aaKnown RBP9.3□□□□□ -0.92
SCAP-201ENST00000265565 J3QL48 77 aa9.29□□□□□ -0.92
SCAP-201ENST00000265565 ROMO1P60602 79 aa9.26□□□□□ -0.93
SCAP-201ENST00000265565 KRTAP25-1Q3LHN0 102 aa9.16□□□□□ -0.94
SCAP-201ENST00000265565 FBN3Q75N90 2809 aa9.16□□□□□ -0.94
SCAP-201ENST00000265565 TRRAPQ9Y4A5 3859 aa9.15□□□□□ -0.94
SCAP-201ENST00000265565 CAMK2N1Q7Z7J9 78 aa9.14□□□□□ -0.95
SCAP-201ENST00000265565 Q5VSD8 79 aa9.12□□□□□ -0.95
SCAP-201ENST00000265565 R4GN34 69 aa9.12□□□□□ -0.95
SCAP-201ENST00000265565 KRTAP1-4P0C5Y4 121 aa9.08□□□□□ -0.96
SCAP-201ENST00000265565 RPS29P62273 56 aaKnown RBP9.07□□□□□ -0.96
SCAP-201ENST00000265565 LUZP6Q538Z0 58 aa9.07□□□□□ -0.96
SCAP-201ENST00000265565 VPS13CQ709C8 3753 aa9.04□□□□□ -0.96
SCAP-201ENST00000265565 M0QZ58 72 aa9.02□□□□□ -0.97
SCAP-201ENST00000265565 KRTAP16-1A8MUX0 517 aa9□□□□□ -0.97
SCAP-201ENST00000265565 A8MUU9 505 aa8.99□□□□□ -0.97
SCAP-201ENST00000265565 KRTAP13-3Q3SY46 172 aa8.98□□□□□ -0.97
SCAP-201ENST00000265565 C20orf166-AS1Q96NR2 134 aa8.96□□□□□ -0.98
SCAP-201ENST00000265565 H0YAA0 97 aa8.95□□□□□ -0.98
SCAP-201ENST00000265565 MEGF8Q7Z7M0 2845 aa8.9□□□□□ -0.98
SCAP-201ENST00000265565 ANK3Q12955 4377 aaKnown RBP8.86□□□□□ -0.99
SCAP-201ENST00000265565 COL7A1Q02388 2944 aa8.85□□□□□ -0.99
SCAP-201ENST00000265565 SEC61BP60468 96 aaKnown RBP8.83□□□□□ -1
SCAP-201ENST00000265565 NDUFAF8A1L188 74 aa8.82□□□□□ -1
SCAP-201ENST00000265565 C10orf95Q9H7T3 257 aa8.8□□□□□ -1
SCAP-201ENST00000265565 M0R2T5 61 aa8.74□□□□□ -1.01
SCAP-201ENST00000265565 ZNF469Q96JG9 3925 aaPredicted RBP8.71□□□□□ -1.01
SCAP-201ENST00000265565 A0A0A0MQY5 61 aa8.66□□□□□ -1.02
SCAP-201ENST00000265565 CSMD3Q7Z407 3707 aa8.66□□□□□ -1.02
SCAP-201ENST00000265565 XP32Q5T750 250 aa8.65□□□□□ -1.03
SCAP-201ENST00000265565 P0C880 135 aa8.62□□□□□ -1.03
SCAP-201ENST00000265565 KRTAP3-1Q9BYR8 98 aa8.51□□□□□ -1.05
SCAP-201ENST00000265565 AKAP9Q99996 3911 aa8.4□□□□□ -1.06
SCAP-201ENST00000265565 PLAC4Q8WY50 150 aa8.39□□□□□ -1.07
SCAP-201ENST00000265565 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
SCAP-201ENST00000265565 KRTAP10-8P60410 259 aa8.31□□□□□ -1.08
SCAP-201ENST00000265565 TPRXLQ17RH7 258 aa8.29□□□□□ -1.08
SCAP-201ENST00000265565 TNP1P09430 55 aa8.27□□□□□ -1.08
SCAP-201ENST00000265565 KRTAP21-3Q3LHN1 58 aa8.27□□□□□ -1.08
SCAP-201ENST00000265565 A0A1B0GVY2 172 aa8.26□□□□□ -1.09
SCAP-201ENST00000265565 KRTAP13-4Q3LI77 160 aa8.26□□□□□ -1.09
SCAP-201ENST00000265565 HUWE1Q7Z6Z7 4374 aaKnown RBP8.23□□□□□ -1.09
SCAP-201ENST00000265565 KRTAP10-6P60371 365 aaPredicted RBP8.22□□□□□ -1.09
SCAP-201ENST00000265565 KRTAP12-1P59990 96 aa8.19□□□□□ -1.1
SCAP-201ENST00000265565 PP632Q6XCG6 107 aa8.15□□□□□ -1.11
SCAP-201ENST00000265565 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
SCAP-201ENST00000265565 KRTAP3-2Q9BYR7 98 aa7.99□□□□□ -1.13
SCAP-201ENST00000265565 DNAH10Q8IVF4 4471 aa7.99□□□□□ -1.13
SCAP-201ENST00000265565 PLECQ15149 4684 aaKnown RBP7.89□□□□□ -1.15
SCAP-201ENST00000265565 DNAH9Q9NYC9 4486 aa7.87□□□□□ -1.15
SCAP-201ENST00000265565 KRTAP10-4P60372 401 aaPredicted RBP7.87□□□□□ -1.15
SCAP-201ENST00000265565 DNAH11Q96DT5 4516 aa7.85□□□□□ -1.15
SCAP-201ENST00000265565 DNAH1Q9P2D7 4330 aa7.81□□□□□ -1.16
SCAP-201ENST00000265565 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
SCAP-201ENST00000265565 MT1HL1P0DM35 61 aa7.77□□□□□ -1.17
SCAP-201ENST00000265565 KRTAP15-1Q3LI76 137 aa7.75□□□□□ -1.17
SCAP-201ENST00000265565 DNAH5Q8TE73 4624 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms