RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 C8orf87E5RJ46 101 aa11.91□□□□□ -0.5
CSPG5-201ENST00000264723 ACYP2P14621 99 aa11.91□□□□□ -0.5
CSPG5-201ENST00000264723 FLG2Q5D862 2391 aaPredicted RBP11.91□□□□□ -0.5
CSPG5-201ENST00000264723 LOC101927531A0A1B0GV80 90 aa11.91□□□□□ -0.5
CSPG5-201ENST00000264723 A0A087X002 238 aa11.9□□□□□ -0.5
CSPG5-201ENST00000264723 NOTCH2NLQ7Z3S9 236 aa11.9□□□□□ -0.5
CSPG5-201ENST00000264723 Q8N9P0 234 aaPredicted RBP11.9□□□□□ -0.5
CSPG5-201ENST00000264723 KRTAP10-1P60331 282 aa11.88□□□□□ -0.51
CSPG5-201ENST00000264723 COL7A1Q02388 2944 aa11.88□□□□□ -0.51
CSPG5-201ENST00000264723 Q6ZRN7 208 aaPredicted RBP11.87□□□□□ -0.51
CSPG5-201ENST00000264723 Q6ZR54 194 aa11.86□□□□□ -0.51
CSPG5-201ENST00000264723 A0A1B0GU69 56 aa11.86□□□□□ -0.51
CSPG5-201ENST00000264723 IGLV7-46A0A075B6I9 117 aa11.85□□□□□ -0.51
CSPG5-201ENST00000264723 Q5VV11 94 aa11.82□□□□□ -0.52
CSPG5-201ENST00000264723 A8MU10 97 aa11.82□□□□□ -0.52
CSPG5-201ENST00000264723 LCE6AA0A183 80 aa11.78□□□□□ -0.52
CSPG5-201ENST00000264723 HRES1P13985 223 aa11.75□□□□□ -0.53
CSPG5-201ENST00000264723 Q8N1X5 172 aa11.7□□□□□ -0.54
CSPG5-201ENST00000264723 Q5W150 140 aa11.69□□□□□ -0.54
CSPG5-201ENST00000264723 ATP11AUNQ6ZP68 121 aa11.68□□□□□ -0.54
CSPG5-201ENST00000264723 FBN3Q75N90 2809 aa11.68□□□□□ -0.54
CSPG5-201ENST00000264723 KRTAP13-1Q8IUC0 172 aa11.66□□□□□ -0.54
CSPG5-201ENST00000264723 SPINK7P58062 85 aa11.65□□□□□ -0.54
CSPG5-201ENST00000264723 K7ERS5 55 aa11.63□□□□□ -0.55
CSPG5-201ENST00000264723 LINC00483Q53H64 154 aa11.63□□□□□ -0.55
CSPG5-201ENST00000264723 Q75L30 129 aa11.59□□□□□ -0.55
CSPG5-201ENST00000264723 CDC42SE1Q9NRR8 79 aa11.59□□□□□ -0.55
CSPG5-201ENST00000264723 LINC01558Q9Y6Z2 57 aa11.55□□□□□ -0.56
CSPG5-201ENST00000264723 LCA10Q71F78 164 aa11.55□□□□□ -0.56
CSPG5-201ENST00000264723 KTN1-AS1Q86SY8 53 aa11.52□□□□□ -0.56
CSPG5-201ENST00000264723 UQCR11O14957 56 aa11.5□□□□□ -0.57
CSPG5-201ENST00000264723 MIR22HGQ0VDD5 57 aa11.49□□□□□ -0.57
CSPG5-201ENST00000264723 MEGF8Q7Z7M0 2845 aa11.43□□□□□ -0.58
CSPG5-201ENST00000264723 PRAC1Q96KF2 57 aa11.42□□□□□ -0.58
CSPG5-201ENST00000264723 J3QL48 77 aa11.41□□□□□ -0.58
CSPG5-201ENST00000264723 KRTAP13-2Q52LG2 175 aa11.39□□□□□ -0.59
CSPG5-201ENST00000264723 RBM12B-AS1Q9P1G2 102 aa11.35□□□□□ -0.59
CSPG5-201ENST00000264723 Q5VSD8 79 aa11.3□□□□□ -0.6
CSPG5-201ENST00000264723 DMAC1Q96GE9 116 aa11.29□□□□□ -0.6
CSPG5-201ENST00000264723 HUWE1Q7Z6Z7 4374 aaKnown RBP11.23□□□□□ -0.61
CSPG5-201ENST00000264723 ASB16-AS1Q495Z4 193 aa11.2□□□□□ -0.62
CSPG5-201ENST00000264723 DNAH10Q8IVF4 4471 aa11.19□□□□□ -0.62
CSPG5-201ENST00000264723 A0A0D9SG42 100 aa11.14□□□□□ -0.63
CSPG5-201ENST00000264723 ANK2Q01484 3957 aa11.14□□□□□ -0.63
CSPG5-201ENST00000264723 ADM2Q7Z4H4 148 aa11.13□□□□□ -0.63
CSPG5-201ENST00000264723 A6NN06 94 aa11.11□□□□□ -0.63
CSPG5-201ENST00000264723 Q6ZSA8 131 aa11.1□□□□□ -0.63
CSPG5-201ENST00000264723 COX6B2Q6YFQ2 88 aa11.09□□□□□ -0.63
CSPG5-201ENST00000264723 CRIPTQ9P021 101 aa11.05□□□□□ -0.64
CSPG5-201ENST00000264723 A0A1B0GU33 70 aa11.04□□□□□ -0.64
CSPG5-201ENST00000264723 KRTAP1-4P0C5Y4 121 aa11.04□□□□□ -0.64
CSPG5-201ENST00000264723 LINC01554Q52M75 96 aa11.03□□□□□ -0.64
CSPG5-201ENST00000264723 KRTAP21-3Q3LHN1 58 aa11.03□□□□□ -0.64
CSPG5-201ENST00000264723 CSAG1Q6PB30 78 aa11□□□□□ -0.65
CSPG5-201ENST00000264723 H3BS24 57 aa10.96□□□□□ -0.65
CSPG5-201ENST00000264723 SPATA8Q6RVD6 105 aa10.94□□□□□ -0.66
CSPG5-201ENST00000264723 SPINT4Q6UDR6 99 aa10.92□□□□□ -0.66
CSPG5-201ENST00000264723 KRTAP13-3Q3SY46 172 aa10.9□□□□□ -0.66
CSPG5-201ENST00000264723 PLECQ15149 4684 aaKnown RBP10.89□□□□□ -0.67
CSPG5-201ENST00000264723 LYSTQ99698 3801 aa10.89□□□□□ -0.67
CSPG5-201ENST00000264723 KRTAP16-1A8MUX0 517 aa10.87□□□□□ -0.67
CSPG5-201ENST00000264723 DNAH9Q9NYC9 4486 aa10.83□□□□□ -0.68
CSPG5-201ENST00000264723 S4R3F8 94 aa10.8□□□□□ -0.68
CSPG5-201ENST00000264723 RPS29P62273 56 aaKnown RBP10.79□□□□□ -0.68
CSPG5-201ENST00000264723 H1FX-AS1Q4G0G2 97 aa10.73□□□□□ -0.69
CSPG5-201ENST00000264723 DNAH1Q9P2D7 4330 aa10.67□□□□□ -0.7
CSPG5-201ENST00000264723 A8MUU9 505 aa10.63□□□□□ -0.71
CSPG5-201ENST00000264723 STARD9Q9P2P6 4700 aa10.62□□□□□ -0.71
CSPG5-201ENST00000264723 DNAH11Q96DT5 4516 aa10.61□□□□□ -0.71
CSPG5-201ENST00000264723 C20orf166-AS1Q96NR2 134 aa10.61□□□□□ -0.71
CSPG5-201ENST00000264723 SEC61BP60468 96 aaKnown RBP10.59□□□□□ -0.71
CSPG5-201ENST00000264723 RPL37P61927 97 aaKnown RBP10.55□□□□□ -0.72
CSPG5-201ENST00000264723 KMT2AQ03164 3969 aa10.54□□□□□ -0.72
CSPG5-201ENST00000264723 H0YAA0 97 aa10.53□□□□□ -0.72
CSPG5-201ENST00000264723 DNHD1Q96M86 4753 aa10.52□□□□□ -0.72
CSPG5-201ENST00000264723 PRKDCP78527 4128 aaKnown RBP10.52□□□□□ -0.72
CSPG5-201ENST00000264723 CMYA5Q8N3K9 4069 aa10.52□□□□□ -0.72
CSPG5-201ENST00000264723 DNAH7Q8WXX0 4024 aa10.52□□□□□ -0.72
CSPG5-201ENST00000264723 A0A1B0GVY2 172 aa10.52□□□□□ -0.72
CSPG5-201ENST00000264723 R4GN34 69 aa10.5□□□□□ -0.73
CSPG5-201ENST00000264723 M0R2T5 61 aa10.5□□□□□ -0.73
CSPG5-201ENST00000264723 XP32Q5T750 250 aa10.45□□□□□ -0.74
CSPG5-201ENST00000264723 FRAS1Q86XX4 4008 aa10.44□□□□□ -0.74
CSPG5-201ENST00000264723 CAMK2N1Q7Z7J9 78 aa10.42□□□□□ -0.74
CSPG5-201ENST00000264723 DNAH8Q96JB1 4490 aa10.42□□□□□ -0.74
CSPG5-201ENST00000264723 M0QZ58 72 aa10.4□□□□□ -0.74
CSPG5-201ENST00000264723 ROMO1P60602 79 aa10.38□□□□□ -0.75
CSPG5-201ENST00000264723 DNAH3Q8TD57 4116 aa10.38□□□□□ -0.75
CSPG5-201ENST00000264723 VPS13DQ5THJ4 4388 aa10.38□□□□□ -0.75
CSPG5-201ENST00000264723 KRTAP25-1Q3LHN0 102 aa10.36□□□□□ -0.75
CSPG5-201ENST00000264723 KRTAP3-1Q9BYR8 98 aa10.36□□□□□ -0.75
CSPG5-201ENST00000264723 LRP1BQ9NZR2 4599 aa10.35□□□□□ -0.75
CSPG5-201ENST00000264723 DNAH17Q9UFH2 4485 aa10.3□□□□□ -0.76
CSPG5-201ENST00000264723 KRTAP10-8P60410 259 aa10.29□□□□□ -0.76
CSPG5-201ENST00000264723 DNAH5Q8TE73 4624 aa10.23□□□□□ -0.77
CSPG5-201ENST00000264723 DNAH2Q9P225 4427 aa10.22□□□□□ -0.77
CSPG5-201ENST00000264723 FAT1Q14517 4588 aa10.22□□□□□ -0.77
CSPG5-201ENST00000264723 C10orf95Q9H7T3 257 aa10.2□□□□□ -0.78
CSPG5-201ENST00000264723 DNAH6Q9C0G6 4158 aa10.2□□□□□ -0.78
CSPG5-201ENST00000264723 P0C880 135 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms