RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 DSPP15924 2871 aaKnown RBP8□□□□□ -1.13
NID1-201ENST00000264187 XP32Q5T750 250 aa8□□□□□ -1.13
NID1-201ENST00000264187 HIVEP1P15822 2718 aa7.97□□□□□ -1.13
NID1-201ENST00000264187 KRTAP10-10P60014 251 aa7.97□□□□□ -1.13
NID1-201ENST00000264187 TACC2O95359 2948 aa7.96□□□□□ -1.14
NID1-201ENST00000264187 KALRNO60229 2985 aa7.94□□□□□ -1.14
NID1-201ENST00000264187 CRYBG3Q68DQ2 2970 aa7.94□□□□□ -1.14
NID1-201ENST00000264187 ITPR1Q14643 2758 aa7.92□□□□□ -1.14
NID1-201ENST00000264187 VCANP13611 3396 aa7.91□□□□□ -1.14
NID1-201ENST00000264187 CELSR3Q9NYQ7 3312 aa7.9□□□□□ -1.14
NID1-201ENST00000264187 UTP20O75691 2785 aaKnown RBP7.89□□□□□ -1.15
NID1-201ENST00000264187 DNAH14Q0VDD8 3507 aa7.86□□□□□ -1.15
NID1-201ENST00000264187 VPS13AQ96RL7 3174 aa7.85□□□□□ -1.15
NID1-201ENST00000264187 KRTAP1-4P0C5Y4 121 aa7.85□□□□□ -1.15
NID1-201ENST00000264187 EYSQ5T1H1 3165 aa7.84□□□□□ -1.15
NID1-201ENST00000264187 PRO2289Q9P1D8 64 aa7.8□□□□□ -1.16
NID1-201ENST00000264187 COL6A3P12111 3177 aa7.79□□□□□ -1.16
NID1-201ENST00000264187 TENM4Q6N022 2769 aa7.78□□□□□ -1.16
NID1-201ENST00000264187 LAMA1P25391 3075 aa7.77□□□□□ -1.17
NID1-201ENST00000264187 LRBAP50851 2863 aa7.74□□□□□ -1.17
NID1-201ENST00000264187 SPEGQ15772 3267 aa7.73□□□□□ -1.17
NID1-201ENST00000264187 TPRXLQ17RH7 258 aa7.69□□□□□ -1.18
NID1-201ENST00000264187 CFAP47Q6ZTR5 3102 aa7.69□□□□□ -1.18
NID1-201ENST00000264187 FLNCQ14315 2725 aa7.68□□□□□ -1.18
NID1-201ENST00000264187 CELSR2Q9HCU4 2923 aa7.68□□□□□ -1.18
NID1-201ENST00000264187 ATMQ13315 3056 aa7.67□□□□□ -1.18
NID1-201ENST00000264187 SPTBN5Q9NRC6 3674 aaKnown RBP7.66□□□□□ -1.18
NID1-201ENST00000264187 COL12A1Q99715 3063 aa7.66□□□□□ -1.18
NID1-201ENST00000264187 KRTAP13-3Q3SY46 172 aa7.6□□□□□ -1.19
NID1-201ENST00000264187 TENM3Q9P273 2699 aa7.6□□□□□ -1.19
NID1-201ENST00000264187 MYO15AQ9UKN7 3530 aa7.59□□□□□ -1.19
NID1-201ENST00000264187 BOD1L1Q8NFC6 3051 aa7.58□□□□□ -1.2
NID1-201ENST00000264187 FRYLO94915 3013 aa7.58□□□□□ -1.2
NID1-201ENST00000264187 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
NID1-201ENST00000264187 KRTAP21-3Q3LHN1 58 aa7.57□□□□□ -1.2
NID1-201ENST00000264187 NBEAQ8NFP9 2946 aa7.56□□□□□ -1.2
NID1-201ENST00000264187 DCHS2Q6V1P9 2916 aa7.53□□□□□ -1.2
NID1-201ENST00000264187 TENM1Q9UKZ4 2725 aa7.52□□□□□ -1.21
NID1-201ENST00000264187 NIPBLQ6KC79 2804 aaeCLIP7.5□□□□□ -1.21
NID1-201ENST00000264187 ADGRG4Q8IZF6 3080 aa7.5□□□□□ -1.21
NID1-201ENST00000264187 TNRC18O15417 2968 aaPredicted RBP7.48□□□□□ -1.21
NID1-201ENST00000264187 ZZEF1O43149 2961 aa7.48□□□□□ -1.21
NID1-201ENST00000264187 TGP01266 2768 aa7.47□□□□□ -1.21
NID1-201ENST00000264187 NF1P21359 2839 aa7.46□□□□□ -1.21
NID1-201ENST00000264187 USP34Q70CQ2 3546 aa7.46□□□□□ -1.22
NID1-201ENST00000264187 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
NID1-201ENST00000264187 TENM2Q9NT68 2774 aa7.38□□□□□ -1.23
NID1-201ENST00000264187 KRTAP12-1P59990 96 aa7.34□□□□□ -1.23
NID1-201ENST00000264187 KRTAP15-1Q3LI76 137 aa7.34□□□□□ -1.24
NID1-201ENST00000264187 MUC3AQ02505 3323 aa7.31□□□□□ -1.24
NID1-201ENST00000264187 PDZD2O15018 2839 aa7.31□□□□□ -1.24
NID1-201ENST00000264187 DMXL1Q9Y485 3027 aa7.3□□□□□ -1.24
NID1-201ENST00000264187 LOC400499M0QZD8 3231 aa7.27□□□□□ -1.25
NID1-201ENST00000264187 PKD1L1Q8TDX9 2849 aa7.24□□□□□ -1.25
NID1-201ENST00000264187 ZANQ9Y493 2812 aa7.21□□□□□ -1.26
NID1-201ENST00000264187 VWFP04275 2813 aa7.2□□□□□ -1.26
NID1-201ENST00000264187 WDFY3Q8IZQ1 3526 aa7.19□□□□□ -1.26
NID1-201ENST00000264187 CELSR1Q9NYQ6 3014 aa7.18□□□□□ -1.26
NID1-201ENST00000264187 CRCT1Q9UGL9 99 aa7.17□□□□□ -1.26
NID1-201ENST00000264187 DMDP11532 3685 aa7.17□□□□□ -1.26
NID1-201ENST00000264187 FBN2P35556 2912 aa7.16□□□□□ -1.26
NID1-201ENST00000264187 ASPMQ8IZT6 3477 aa7.13□□□□□ -1.27
NID1-201ENST00000264187 KRTAP3-1Q9BYR8 98 aa7.13□□□□□ -1.27
NID1-201ENST00000264187 LAMA5O15230 3695 aa7.09□□□□□ -1.27
NID1-201ENST00000264187 DCHS1Q96JQ0 3298 aa7.07□□□□□ -1.28
NID1-201ENST00000264187 RELNP78509 3460 aa7□□□□□ -1.29
NID1-201ENST00000264187 SRRM2Q9UQ35 2752 aaKnown RBP6.97□□□□□ -1.29
NID1-201ENST00000264187 KRTAP10-6P60371 365 aaPredicted RBP6.96□□□□□ -1.3
NID1-201ENST00000264187 ZFHX4Q86UP3 3567 aa6.94□□□□□ -1.3
NID1-201ENST00000264187 HRNRQ86YZ3 2850 aaPredicted RBP6.91□□□□□ -1.3
NID1-201ENST00000264187 INE1O15225 51 aa6.86□□□□□ -1.31
NID1-201ENST00000264187 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
NID1-201ENST00000264187 MXRA5Q9NR99 2828 aa6.82□□□□□ -1.32
NID1-201ENST00000264187 SMG1Q96Q15 3661 aaKnown RBP6.71□□□□□ -1.34
NID1-201ENST00000264187 KRTAP12-3P60328 96 aa6.65□□□□□ -1.35
NID1-201ENST00000264187 MEGF8Q7Z7M0 2845 aa6.64□□□□□ -1.35
NID1-201ENST00000264187 KRTAP3-2Q9BYR7 98 aa6.64□□□□□ -1.35
NID1-201ENST00000264187 FBN3Q75N90 2809 aa6.63□□□□□ -1.35
NID1-201ENST00000264187 KRTAP3-3Q9BYR6 98 aa6.6□□□□□ -1.35
NID1-201ENST00000264187 COL7A1Q02388 2944 aa6.58□□□□□ -1.36
NID1-201ENST00000264187 CSMD1Q96PZ7 3565 aa6.58□□□□□ -1.36
NID1-201ENST00000264187 LCE3AQ5TA76 89 aa6.58□□□□□ -1.36
NID1-201ENST00000264187 SVEP1Q4LDE5 3571 aa6.58□□□□□ -1.36
NID1-201ENST00000264187 FBN1P35555 2871 aaKnown RBP6.57□□□□□ -1.36
NID1-201ENST00000264187 KRTAP10-5P60370 271 aa6.56□□□□□ -1.36
NID1-201ENST00000264187 MT1HL1P0DM35 61 aa6.54□□□□□ -1.36
NID1-201ENST00000264187 NBPF19A0A087WUL8 3843 aa6.54□□□□□ -1.36
NID1-201ENST00000264187 SPENQ96T58 3664 aaKnown RBP6.49□□□□□ -1.37
NID1-201ENST00000264187 CUBNO60494 3623 aa6.47□□□□□ -1.37
NID1-201ENST00000264187 KRTAP4-5Q9BYR2 181 aa6.43□□□□□ -1.38
NID1-201ENST00000264187 ZFHX3Q15911 3703 aa6.42□□□□□ -1.38
NID1-201ENST00000264187 CSMD2Q7Z408 3487 aa6.41□□□□□ -1.38
NID1-201ENST00000264187 LORP23490 312 aaPredicted RBP6.39□□□□□ -1.39
NID1-201ENST00000264187 BSNQ9UPA5 3926 aa6.35□□□□□ -1.39
NID1-201ENST00000264187 KRTAP8-1Q8IUC2 63 aa6.32□□□□□ -1.4
NID1-201ENST00000264187 OTOGQ6ZRI0 2925 aa6.25□□□□□ -1.41
NID1-201ENST00000264187 KRTAP23-1A1A580 65 aa6.24□□□□□ -1.41
NID1-201ENST00000264187 KRTAP10-4P60372 401 aaPredicted RBP6.16□□□□□ -1.42
NID1-201ENST00000264187 VPS13CQ709C8 3753 aa6.12□□□□□ -1.43
NID1-201ENST00000264187 ANK3Q12955 4377 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms