RNA–Protein interactions for RNA: ENST00000263212.9

PPM1F-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PPM1F, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-201ENST00000263212 KRTAP13-2Q52LG2 175 aa8.34□□□□□ -1.07
PPM1F-201ENST00000263212 ZZEF1O43149 2961 aa8.33□□□□□ -1.08
PPM1F-201ENST00000263212 M0QZ58 72 aa8.33□□□□□ -1.08
PPM1F-201ENST00000263212 HIVEP1P15822 2718 aa8.33□□□□□ -1.08
PPM1F-201ENST00000263212 A0A0A0MQY5 61 aa8.31□□□□□ -1.08
PPM1F-201ENST00000263212 ADM2Q7Z4H4 148 aa8.3□□□□□ -1.08
PPM1F-201ENST00000263212 CELSR2Q9HCU4 2923 aa8.29□□□□□ -1.08
PPM1F-201ENST00000263212 KRTAP25-1Q3LHN0 102 aa8.29□□□□□ -1.08
PPM1F-201ENST00000263212 M0R2T5 61 aa8.29□□□□□ -1.08
PPM1F-201ENST00000263212 COL6A3P12111 3177 aa8.28□□□□□ -1.08
PPM1F-201ENST00000263212 ZANQ9Y493 2812 aa8.28□□□□□ -1.08
PPM1F-201ENST00000263212 REV3LO60673 3130 aa8.24□□□□□ -1.09
PPM1F-201ENST00000263212 HRNRQ86YZ3 2850 aaPredicted RBP8.18□□□□□ -1.1
PPM1F-201ENST00000263212 CFAP47Q6ZTR5 3102 aa8.18□□□□□ -1.1
PPM1F-201ENST00000263212 DCHS2Q6V1P9 2916 aa8.17□□□□□ -1.1
PPM1F-201ENST00000263212 TNRC18O15417 2968 aaPredicted RBP8.17□□□□□ -1.1
PPM1F-201ENST00000263212 EYSQ5T1H1 3165 aa8.13□□□□□ -1.11
PPM1F-201ENST00000263212 A8MUU9 505 aa8.12□□□□□ -1.11
PPM1F-201ENST00000263212 TENM4Q6N022 2769 aa8.12□□□□□ -1.11
PPM1F-201ENST00000263212 C20orf166-AS1Q96NR2 134 aa8.09□□□□□ -1.11
PPM1F-201ENST00000263212 KRTAP21-3Q3LHN1 58 aa8.07□□□□□ -1.12
PPM1F-201ENST00000263212 FBN2P35556 2912 aa8.06□□□□□ -1.12
PPM1F-201ENST00000263212 NF1P21359 2839 aa8.06□□□□□ -1.12
PPM1F-201ENST00000263212 SPEGQ15772 3267 aa8.01□□□□□ -1.13
PPM1F-201ENST00000263212 PLAC4Q8WY50 150 aa8□□□□□ -1.13
PPM1F-201ENST00000263212 KRTAP16-1A8MUX0 517 aa8□□□□□ -1.13
PPM1F-201ENST00000263212 DMXL1Q9Y485 3027 aa7.99□□□□□ -1.13
PPM1F-201ENST00000263212 KRTAP1-4P0C5Y4 121 aa7.98□□□□□ -1.13
PPM1F-201ENST00000263212 LOC400499M0QZD8 3231 aa7.95□□□□□ -1.14
PPM1F-201ENST00000263212 CRYBG3Q68DQ2 2970 aa7.94□□□□□ -1.14
PPM1F-201ENST00000263212 NDUFAF8A1L188 74 aa7.92□□□□□ -1.14
PPM1F-201ENST00000263212 USP34Q70CQ2 3546 aa7.92□□□□□ -1.14
PPM1F-201ENST00000263212 SPTBN5Q9NRC6 3674 aaKnown RBP7.89□□□□□ -1.15
PPM1F-201ENST00000263212 MXRA5Q9NR99 2828 aa7.88□□□□□ -1.15
PPM1F-201ENST00000263212 H0YAA0 97 aa7.86□□□□□ -1.15
PPM1F-201ENST00000263212 TENM3Q9P273 2699 aa7.8□□□□□ -1.16
PPM1F-201ENST00000263212 XP32Q5T750 250 aa7.77□□□□□ -1.16
PPM1F-201ENST00000263212 KRTAP13-3Q3SY46 172 aa7.77□□□□□ -1.17
PPM1F-201ENST00000263212 TNP1P09430 55 aa7.76□□□□□ -1.17
PPM1F-201ENST00000263212 CELSR1Q9NYQ6 3014 aa7.75□□□□□ -1.17
PPM1F-201ENST00000263212 TENM1Q9UKZ4 2725 aa7.73□□□□□ -1.17
PPM1F-201ENST00000263212 TGP01266 2768 aa7.72□□□□□ -1.17
PPM1F-201ENST00000263212 C10orf95Q9H7T3 257 aa7.71□□□□□ -1.17
PPM1F-201ENST00000263212 PP632Q6XCG6 107 aa7.71□□□□□ -1.18
PPM1F-201ENST00000263212 MYO15AQ9UKN7 3530 aa7.65□□□□□ -1.18
PPM1F-201ENST00000263212 P0C880 135 aa7.62□□□□□ -1.19
PPM1F-201ENST00000263212 TPRXLQ17RH7 258 aa7.59□□□□□ -1.19
PPM1F-201ENST00000263212 PDZD2O15018 2839 aa7.58□□□□□ -1.2
PPM1F-201ENST00000263212 TENM2Q9NT68 2774 aa7.55□□□□□ -1.2
PPM1F-201ENST00000263212 RELNP78509 3460 aa7.51□□□□□ -1.21
PPM1F-201ENST00000263212 DCHS1Q96JQ0 3298 aa7.47□□□□□ -1.21
PPM1F-201ENST00000263212 WDFY3Q8IZQ1 3526 aa7.46□□□□□ -1.22
PPM1F-201ENST00000263212 PKD1L1Q8TDX9 2849 aa7.44□□□□□ -1.22
PPM1F-201ENST00000263212 KRTAP10-8P60410 259 aa7.43□□□□□ -1.22
PPM1F-201ENST00000263212 VWFP04275 2813 aa7.37□□□□□ -1.23
PPM1F-201ENST00000263212 A0A1B0GVY2 172 aa7.36□□□□□ -1.23
PPM1F-201ENST00000263212 KRTAP12-2P59991 146 aa7.31□□□□□ -1.24
PPM1F-201ENST00000263212 KRTAP3-1Q9BYR8 98 aa7.31□□□□□ -1.24
PPM1F-201ENST00000263212 FBN1P35555 2871 aaKnown RBP7.31□□□□□ -1.24
PPM1F-201ENST00000263212 ZFHX4Q86UP3 3567 aa7.28□□□□□ -1.24
PPM1F-201ENST00000263212 MUC3AQ02505 3323 aa7.27□□□□□ -1.25
PPM1F-201ENST00000263212 KRTAP12-1P59990 96 aa7.24□□□□□ -1.25
PPM1F-201ENST00000263212 CSMD1Q96PZ7 3565 aa7.22□□□□□ -1.25
PPM1F-201ENST00000263212 LAMA5O15230 3695 aa7.22□□□□□ -1.25
PPM1F-201ENST00000263212 OTOGQ6ZRI0 2925 aa7.21□□□□□ -1.26
PPM1F-201ENST00000263212 KRTAP10-10P60014 251 aa7.21□□□□□ -1.26
PPM1F-201ENST00000263212 DMDP11532 3685 aa7.2□□□□□ -1.26
PPM1F-201ENST00000263212 ASPMQ8IZT6 3477 aa7.18□□□□□ -1.26
PPM1F-201ENST00000263212 FBN3Q75N90 2809 aa7.18□□□□□ -1.26
PPM1F-201ENST00000263212 KRTAP13-4Q3LI77 160 aa7.16□□□□□ -1.26
PPM1F-201ENST00000263212 KRTAP10-6P60371 365 aaPredicted RBP7.13□□□□□ -1.27
PPM1F-201ENST00000263212 PRO2289Q9P1D8 64 aa7.12□□□□□ -1.27
PPM1F-201ENST00000263212 SMG1Q96Q15 3661 aaKnown RBP7.11□□□□□ -1.27
PPM1F-201ENST00000263212 MEGF8Q7Z7M0 2845 aa7.06□□□□□ -1.28
PPM1F-201ENST00000263212 SRRM2Q9UQ35 2752 aaKnown RBP7.05□□□□□ -1.28
PPM1F-201ENST00000263212 ANK3Q12955 4377 aaKnown RBP7.01□□□□□ -1.29
PPM1F-201ENST00000263212 NBPF19A0A087WUL8 3843 aa7□□□□□ -1.29
PPM1F-201ENST00000263212 SVEP1Q4LDE5 3571 aa6.93□□□□□ -1.3
PPM1F-201ENST00000263212 COL7A1Q02388 2944 aa6.9□□□□□ -1.3
PPM1F-201ENST00000263212 KRTAP3-2Q9BYR7 98 aa6.9□□□□□ -1.31
PPM1F-201ENST00000263212 ZFHX3Q15911 3703 aa6.87□□□□□ -1.31
PPM1F-201ENST00000263212 KRTAP3-3Q9BYR6 98 aa6.87□□□□□ -1.31
PPM1F-201ENST00000263212 CUBNO60494 3623 aa6.81□□□□□ -1.32
PPM1F-201ENST00000263212 TRRAPQ9Y4A5 3859 aa6.81□□□□□ -1.32
PPM1F-201ENST00000263212 KRTAP15-1Q3LI76 137 aa6.8□□□□□ -1.32
PPM1F-201ENST00000263212 CSMD2Q7Z408 3487 aa6.78□□□□□ -1.32
PPM1F-201ENST00000263212 MT1HL1P0DM35 61 aa6.78□□□□□ -1.32
PPM1F-201ENST00000263212 SPENQ96T58 3664 aaKnown RBP6.73□□□□□ -1.33
PPM1F-201ENST00000263212 KRTAP10-4P60372 401 aaPredicted RBP6.73□□□□□ -1.33
PPM1F-201ENST00000263212 BSNQ9UPA5 3926 aa6.72□□□□□ -1.33
PPM1F-201ENST00000263212 HUWE1Q7Z6Z7 4374 aaKnown RBP6.61□□□□□ -1.35
PPM1F-201ENST00000263212 INE1O15225 51 aa6.51□□□□□ -1.37
PPM1F-201ENST00000263212 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
PPM1F-201ENST00000263212 VPS13CQ709C8 3753 aa6.43□□□□□ -1.38
PPM1F-201ENST00000263212 KRTAP10-12P60413 245 aa6.42□□□□□ -1.38
PPM1F-201ENST00000263212 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
PPM1F-201ENST00000263212 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
PPM1F-201ENST00000263212 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
PPM1F-201ENST00000263212 DNAH9Q9NYC9 4486 aa6.28□□□□□ -1.4
PPM1F-201ENST00000263212 ALMS1Q8TCU4 4167 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms