RNA–Protein interactions for RNA: ENST00000261917.3

HCN4-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN4, Length 7,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4-201ENST00000261917 TNP1P09430 55 aa9.93□□□□□ -0.82
HCN4-201ENST00000261917 KRTAP25-1Q3LHN0 102 aa9.92□□□□□ -0.82
HCN4-201ENST00000261917 FRYLO94915 3013 aa9.89□□□□□ -0.83
HCN4-201ENST00000261917 NOTCH1P46531 2555 aa9.87□□□□□ -0.83
HCN4-201ENST00000261917 ASPMQ8IZT6 3477 aa9.86□□□□□ -0.83
HCN4-201ENST00000261917 STAB2Q8WWQ8 2551 aa9.86□□□□□ -0.83
HCN4-201ENST00000261917 KRTAP13-1Q8IUC0 172 aa9.85□□□□□ -0.83
HCN4-201ENST00000261917 ATMQ13315 3056 aa9.84□□□□□ -0.83
HCN4-201ENST00000261917 APCP25054 2843 aa9.84□□□□□ -0.83
HCN4-201ENST00000261917 IGSF10Q6WRI0 2623 aa9.83□□□□□ -0.84
HCN4-201ENST00000261917 ASH1LQ9NR48 2969 aaKnown RBP9.8□□□□□ -0.84
HCN4-201ENST00000261917 KRTAP16-1A8MUX0 517 aa9.8□□□□□ -0.84
HCN4-201ENST00000261917 KMT2BQ9UMN6 2715 aaPredicted RBP9.8□□□□□ -0.84
HCN4-201ENST00000261917 TACC2O95359 2948 aa9.79□□□□□ -0.84
HCN4-201ENST00000261917 WDFY3Q8IZQ1 3526 aa9.78□□□□□ -0.84
HCN4-201ENST00000261917 NDUFAF8A1L188 74 aa9.78□□□□□ -0.84
HCN4-201ENST00000261917 COL12A1Q99715 3063 aa9.77□□□□□ -0.85
HCN4-201ENST00000261917 ADGRG4Q8IZF6 3080 aa9.73□□□□□ -0.85
HCN4-201ENST00000261917 KRTAP10-10P60014 251 aa9.72□□□□□ -0.85
HCN4-201ENST00000261917 UBR5O95071 2799 aaPredicted RBP9.72□□□□□ -0.85
HCN4-201ENST00000261917 UTP20O75691 2785 aaKnown RBP9.72□□□□□ -0.85
HCN4-201ENST00000261917 XP32Q5T750 250 aa9.71□□□□□ -0.86
HCN4-201ENST00000261917 NSD1Q96L73 2696 aaPredicted RBP9.71□□□□□ -0.86
HCN4-201ENST00000261917 A6NN06 94 aa9.68□□□□□ -0.86
HCN4-201ENST00000261917 HIVEP1P15822 2718 aa9.67□□□□□ -0.86
HCN4-201ENST00000261917 KRTAP21-3Q3LHN1 58 aa9.64□□□□□ -0.87
HCN4-201ENST00000261917 DCHS1Q96JQ0 3298 aa9.63□□□□□ -0.87
HCN4-201ENST00000261917 NBPF19A0A087WUL8 3843 aa9.62□□□□□ -0.87
HCN4-201ENST00000261917 ITPR1Q14643 2758 aa9.6□□□□□ -0.87
HCN4-201ENST00000261917 LOC400499M0QZD8 3231 aa9.58□□□□□ -0.88
HCN4-201ENST00000261917 ZZEF1O43149 2961 aa9.56□□□□□ -0.88
HCN4-201ENST00000261917 KRTAP1-4P0C5Y4 121 aa9.52□□□□□ -0.89
HCN4-201ENST00000261917 NBEAQ8NFP9 2946 aa9.51□□□□□ -0.89
HCN4-201ENST00000261917 DMXL1Q9Y485 3027 aa9.47□□□□□ -0.89
HCN4-201ENST00000261917 TNRC18O15417 2968 aaPredicted RBP9.45□□□□□ -0.9
HCN4-201ENST00000261917 LAMA5O15230 3695 aa9.42□□□□□ -0.9
HCN4-201ENST00000261917 CELSR2Q9HCU4 2923 aa9.4□□□□□ -0.91
HCN4-201ENST00000261917 TPRXLQ17RH7 258 aa9.4□□□□□ -0.91
HCN4-201ENST00000261917 PRO2289Q9P1D8 64 aa9.39□□□□□ -0.91
HCN4-201ENST00000261917 ZFHX4Q86UP3 3567 aa9.38□□□□□ -0.91
HCN4-201ENST00000261917 CSMD1Q96PZ7 3565 aa9.35□□□□□ -0.91
HCN4-201ENST00000261917 H0YAA0 97 aa9.34□□□□□ -0.91
HCN4-201ENST00000261917 RELNP78509 3460 aa9.33□□□□□ -0.92
HCN4-201ENST00000261917 P0C880 135 aa9.28□□□□□ -0.92
HCN4-201ENST00000261917 PP632Q6XCG6 107 aa9.27□□□□□ -0.93
HCN4-201ENST00000261917 KRTAP13-3Q3SY46 172 aa9.26□□□□□ -0.93
HCN4-201ENST00000261917 DCHS2Q6V1P9 2916 aa9.24□□□□□ -0.93
HCN4-201ENST00000261917 TENM4Q6N022 2769 aa9.22□□□□□ -0.93
HCN4-201ENST00000261917 CELSR1Q9NYQ6 3014 aa9.22□□□□□ -0.93
HCN4-201ENST00000261917 FLNCQ14315 2725 aa9.16□□□□□ -0.94
HCN4-201ENST00000261917 TENM1Q9UKZ4 2725 aa9.11□□□□□ -0.95
HCN4-201ENST00000261917 TENM2Q9NT68 2774 aa9.05□□□□□ -0.96
HCN4-201ENST00000261917 DMDP11532 3685 aa9.05□□□□□ -0.96
HCN4-201ENST00000261917 FBN2P35556 2912 aa9.04□□□□□ -0.96
HCN4-201ENST00000261917 HRNRQ86YZ3 2850 aaPredicted RBP9□□□□□ -0.97
HCN4-201ENST00000261917 SPENQ96T58 3664 aaKnown RBP8.99□□□□□ -0.97
HCN4-201ENST00000261917 NF1P21359 2839 aa8.97□□□□□ -0.97
HCN4-201ENST00000261917 KRTAP12-2P59991 146 aa8.96□□□□□ -0.97
HCN4-201ENST00000261917 SMG1Q96Q15 3661 aaKnown RBP8.95□□□□□ -0.98
HCN4-201ENST00000261917 ZANQ9Y493 2812 aa8.95□□□□□ -0.98
HCN4-201ENST00000261917 ZFHX3Q15911 3703 aa8.9□□□□□ -0.99
HCN4-201ENST00000261917 SVEP1Q4LDE5 3571 aa8.87□□□□□ -0.99
HCN4-201ENST00000261917 NIPBLQ6KC79 2804 aaeCLIP8.83□□□□□ -1
HCN4-201ENST00000261917 TGP01266 2768 aa8.81□□□□□ -1
HCN4-201ENST00000261917 PKD1L1Q8TDX9 2849 aa8.77□□□□□ -1.01
HCN4-201ENST00000261917 VWFP04275 2813 aa8.75□□□□□ -1.01
HCN4-201ENST00000261917 CUBNO60494 3623 aa8.74□□□□□ -1.01
HCN4-201ENST00000261917 CRCT1Q9UGL9 99 aa8.7□□□□□ -1.02
HCN4-201ENST00000261917 TENM3Q9P273 2699 aa8.69□□□□□ -1.02
HCN4-201ENST00000261917 KRTAP15-1Q3LI76 137 aa8.68□□□□□ -1.02
HCN4-201ENST00000261917 CSMD2Q7Z408 3487 aa8.67□□□□□ -1.02
HCN4-201ENST00000261917 KRTAP13-4Q3LI77 160 aa8.65□□□□□ -1.02
HCN4-201ENST00000261917 MXRA5Q9NR99 2828 aa8.65□□□□□ -1.02
HCN4-201ENST00000261917 KRTAP12-1P59990 96 aa8.61□□□□□ -1.03
HCN4-201ENST00000261917 ANK3Q12955 4377 aaKnown RBP8.55□□□□□ -1.04
HCN4-201ENST00000261917 PDZD2O15018 2839 aa8.51□□□□□ -1.05
HCN4-201ENST00000261917 MUC3AQ02505 3323 aa8.47□□□□□ -1.05
HCN4-201ENST00000261917 KRTAP3-1Q9BYR8 98 aa8.47□□□□□ -1.05
HCN4-201ENST00000261917 TRRAPQ9Y4A5 3859 aa8.44□□□□□ -1.06
HCN4-201ENST00000261917 BSNQ9UPA5 3926 aa8.44□□□□□ -1.06
HCN4-201ENST00000261917 VPS13CQ709C8 3753 aa8.42□□□□□ -1.06
HCN4-201ENST00000261917 KRTAP4-5Q9BYR2 181 aa8.31□□□□□ -1.08
HCN4-201ENST00000261917 HUWE1Q7Z6Z7 4374 aaKnown RBP8.27□□□□□ -1.09
HCN4-201ENST00000261917 CSMD3Q7Z407 3707 aa8.26□□□□□ -1.09
HCN4-201ENST00000261917 KRTAP10-12P60413 245 aa8.18□□□□□ -1.1
HCN4-201ENST00000261917 FBN1P35555 2871 aaKnown RBP8.17□□□□□ -1.1
HCN4-201ENST00000261917 KRTAP10-6P60371 365 aaPredicted RBP8.16□□□□□ -1.1
HCN4-201ENST00000261917 MT1HL1P0DM35 61 aa8.14□□□□□ -1.11
HCN4-201ENST00000261917 AKAP9Q99996 3911 aa8.11□□□□□ -1.11
HCN4-201ENST00000261917 MEGF8Q7Z7M0 2845 aa8.1□□□□□ -1.11
HCN4-201ENST00000261917 FBN3Q75N90 2809 aa8.07□□□□□ -1.12
HCN4-201ENST00000261917 COL7A1Q02388 2944 aa8.06□□□□□ -1.12
HCN4-201ENST00000261917 ALMS1Q8TCU4 4167 aa8.02□□□□□ -1.13
HCN4-201ENST00000261917 SRRM2Q9UQ35 2752 aaKnown RBP7.99□□□□□ -1.13
HCN4-201ENST00000261917 OTOGQ6ZRI0 2925 aa7.98□□□□□ -1.13
HCN4-201ENST00000261917 KRTAP3-3Q9BYR6 98 aa7.9□□□□□ -1.14
HCN4-201ENST00000261917 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
HCN4-201ENST00000261917 LCE3AQ5TA76 89 aa7.88□□□□□ -1.15
HCN4-201ENST00000261917 KRTAP12-3P60328 96 aa7.85□□□□□ -1.15
HCN4-201ENST00000261917 KRTAP3-2Q9BYR7 98 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms