RNA–Protein interactions for RNA: ENST00000260665.11

LRPPRC-201, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRPPRC, Length 6,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-201ENST00000260665 DMXL2Q8TDJ6 3036 aa6.5□□□□□ -1.37
LRPPRC-201ENST00000260665 TACC2O95359 2948 aa6.47□□□□□ -1.37
LRPPRC-201ENST00000260665 KMT2BQ9UMN6 2715 aaPredicted RBP6.46□□□□□ -1.37
LRPPRC-201ENST00000260665 VCANP13611 3396 aa6.44□□□□□ -1.38
LRPPRC-201ENST00000260665 CELSR3Q9NYQ7 3312 aa6.44□□□□□ -1.38
LRPPRC-201ENST00000260665 ATMQ13315 3056 aa6.44□□□□□ -1.38
LRPPRC-201ENST00000260665 FRYLO94915 3013 aa6.42□□□□□ -1.38
LRPPRC-201ENST00000260665 CDH23Q9H251 3354 aa6.41□□□□□ -1.38
LRPPRC-201ENST00000260665 NIPBLQ6KC79 2804 aaeCLIP6.4□□□□□ -1.38
LRPPRC-201ENST00000260665 A0A1B0GVY2 172 aa6.39□□□□□ -1.39
LRPPRC-201ENST00000260665 BOD1L1Q8NFC6 3051 aa6.39□□□□□ -1.39
LRPPRC-201ENST00000260665 APCP25054 2843 aa6.38□□□□□ -1.39
LRPPRC-201ENST00000260665 CFAP47Q6ZTR5 3102 aa6.37□□□□□ -1.39
LRPPRC-201ENST00000260665 XP32Q5T750 250 aa6.37□□□□□ -1.39
LRPPRC-201ENST00000260665 COL12A1Q99715 3063 aa6.36□□□□□ -1.39
LRPPRC-201ENST00000260665 ZZEF1O43149 2961 aa6.35□□□□□ -1.39
LRPPRC-201ENST00000260665 ZANQ9Y493 2812 aa6.35□□□□□ -1.39
LRPPRC-201ENST00000260665 LRBAP50851 2863 aa6.34□□□□□ -1.39
LRPPRC-201ENST00000260665 UTP20O75691 2785 aaKnown RBP6.33□□□□□ -1.4
LRPPRC-201ENST00000260665 CELSR2Q9HCU4 2923 aa6.31□□□□□ -1.4
LRPPRC-201ENST00000260665 KRTAP1-4P0C5Y4 121 aa6.3□□□□□ -1.4
LRPPRC-201ENST00000260665 ITPR2Q14571 2701 aa6.27□□□□□ -1.41
LRPPRC-201ENST00000260665 NF1P21359 2839 aa6.27□□□□□ -1.41
LRPPRC-201ENST00000260665 HIVEP1P15822 2718 aa6.25□□□□□ -1.41
LRPPRC-201ENST00000260665 DNAH14Q0VDD8 3507 aa6.24□□□□□ -1.41
LRPPRC-201ENST00000260665 SZT2Q5T011 3432 aa6.22□□□□□ -1.41
LRPPRC-201ENST00000260665 KRTAP10-10P60014 251 aa6.21□□□□□ -1.42
LRPPRC-201ENST00000260665 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
LRPPRC-201ENST00000260665 KRTAP12-2P59991 146 aa6.2□□□□□ -1.42
LRPPRC-201ENST00000260665 TNRC18O15417 2968 aaPredicted RBP6.18□□□□□ -1.42
LRPPRC-201ENST00000260665 DCHS2Q6V1P9 2916 aa6.18□□□□□ -1.42
LRPPRC-201ENST00000260665 COL6A3P12111 3177 aa6.18□□□□□ -1.42
LRPPRC-201ENST00000260665 TPRXLQ17RH7 258 aa6.16□□□□□ -1.42
LRPPRC-201ENST00000260665 DMXL1Q9Y485 3027 aa6.14□□□□□ -1.43
LRPPRC-201ENST00000260665 SPEGQ15772 3267 aa6.14□□□□□ -1.43
LRPPRC-201ENST00000260665 FBN2P35556 2912 aa6.14□□□□□ -1.43
LRPPRC-201ENST00000260665 REV3LO60673 3130 aa6.12□□□□□ -1.43
LRPPRC-201ENST00000260665 KRTAP13-3Q3SY46 172 aa6.11□□□□□ -1.43
LRPPRC-201ENST00000260665 KRTAP13-4Q3LI77 160 aa6.09□□□□□ -1.43
LRPPRC-201ENST00000260665 EYSQ5T1H1 3165 aa6.07□□□□□ -1.44
LRPPRC-201ENST00000260665 TGP01266 2768 aa6.06□□□□□ -1.44
LRPPRC-201ENST00000260665 HRNRQ86YZ3 2850 aaPredicted RBP6.05□□□□□ -1.44
LRPPRC-201ENST00000260665 MXRA5Q9NR99 2828 aa6.05□□□□□ -1.44
LRPPRC-201ENST00000260665 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
LRPPRC-201ENST00000260665 TENM3Q9P273 2699 aa6.03□□□□□ -1.44
LRPPRC-201ENST00000260665 LOC400499M0QZD8 3231 aa6.03□□□□□ -1.44
LRPPRC-201ENST00000260665 TENM4Q6N022 2769 aa6.02□□□□□ -1.45
LRPPRC-201ENST00000260665 CRYBG3Q68DQ2 2970 aa6□□□□□ -1.45
LRPPRC-201ENST00000260665 MYO15AQ9UKN7 3530 aa5.93□□□□□ -1.46
LRPPRC-201ENST00000260665 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
LRPPRC-201ENST00000260665 INE1O15225 51 aa5.87□□□□□ -1.47
LRPPRC-201ENST00000260665 PDZD2O15018 2839 aa5.87□□□□□ -1.47
LRPPRC-201ENST00000260665 TENM1Q9UKZ4 2725 aa5.86□□□□□ -1.47
LRPPRC-201ENST00000260665 KRTAP3-1Q9BYR8 98 aa5.84□□□□□ -1.47
LRPPRC-201ENST00000260665 USP34Q70CQ2 3546 aa5.82□□□□□ -1.48
LRPPRC-201ENST00000260665 DCHS1Q96JQ0 3298 aa5.82□□□□□ -1.48
LRPPRC-201ENST00000260665 CELSR1Q9NYQ6 3014 aa5.8□□□□□ -1.48
LRPPRC-201ENST00000260665 TENM2Q9NT68 2774 aa5.76□□□□□ -1.49
LRPPRC-201ENST00000260665 KRTAP10-6P60371 365 aaPredicted RBP5.76□□□□□ -1.49
LRPPRC-201ENST00000260665 KRTAP21-3Q3LHN1 58 aa5.71□□□□□ -1.5
LRPPRC-201ENST00000260665 VWFP04275 2813 aa5.7□□□□□ -1.5
LRPPRC-201ENST00000260665 SPTBN5Q9NRC6 3674 aaKnown RBP5.66□□□□□ -1.5
LRPPRC-201ENST00000260665 PKD1L1Q8TDX9 2849 aa5.62□□□□□ -1.51
LRPPRC-201ENST00000260665 FBN1P35555 2871 aaKnown RBP5.62□□□□□ -1.51
LRPPRC-201ENST00000260665 RELNP78509 3460 aa5.59□□□□□ -1.51
LRPPRC-201ENST00000260665 WDFY3Q8IZQ1 3526 aa5.57□□□□□ -1.52
LRPPRC-201ENST00000260665 CRCT1Q9UGL9 99 aa5.55□□□□□ -1.52
LRPPRC-201ENST00000260665 SRRM2Q9UQ35 2752 aaKnown RBP5.51□□□□□ -1.53
LRPPRC-201ENST00000260665 KRTAP3-2Q9BYR7 98 aa5.49□□□□□ -1.53
LRPPRC-201ENST00000260665 KRTAP10-12P60413 245 aa5.47□□□□□ -1.53
LRPPRC-201ENST00000260665 ZFHX4Q86UP3 3567 aa5.44□□□□□ -1.54
LRPPRC-201ENST00000260665 OTOGQ6ZRI0 2925 aa5.44□□□□□ -1.54
LRPPRC-201ENST00000260665 ASPMQ8IZT6 3477 aa5.43□□□□□ -1.54
LRPPRC-201ENST00000260665 KRTAP3-3Q9BYR6 98 aa5.42□□□□□ -1.54
LRPPRC-201ENST00000260665 FBN3Q75N90 2809 aa5.4□□□□□ -1.54
LRPPRC-201ENST00000260665 LAMA5O15230 3695 aa5.39□□□□□ -1.55
LRPPRC-201ENST00000260665 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
LRPPRC-201ENST00000260665 MUC3AQ02505 3323 aa5.37□□□□□ -1.55
LRPPRC-201ENST00000260665 CSMD1Q96PZ7 3565 aa5.36□□□□□ -1.55
LRPPRC-201ENST00000260665 CUBNO60494 3623 aa5.35□□□□□ -1.55
LRPPRC-201ENST00000260665 SPENQ96T58 3664 aaKnown RBP5.32□□□□□ -1.56
LRPPRC-201ENST00000260665 SMG1Q96Q15 3661 aaKnown RBP5.31□□□□□ -1.56
LRPPRC-201ENST00000260665 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
LRPPRC-201ENST00000260665 DMDP11532 3685 aa5.29□□□□□ -1.56
LRPPRC-201ENST00000260665 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
LRPPRC-201ENST00000260665 MEGF8Q7Z7M0 2845 aa5.29□□□□□ -1.56
LRPPRC-201ENST00000260665 COL7A1Q02388 2944 aa5.25□□□□□ -1.57
LRPPRC-201ENST00000260665 KRTAP10-5P60370 271 aa5.24□□□□□ -1.57
LRPPRC-201ENST00000260665 SVEP1Q4LDE5 3571 aa5.23□□□□□ -1.57
LRPPRC-201ENST00000260665 MT1HL1P0DM35 61 aa5.14□□□□□ -1.59
LRPPRC-201ENST00000260665 LORP23490 312 aaPredicted RBP5.11□□□□□ -1.59
LRPPRC-201ENST00000260665 ZFHX3Q15911 3703 aa5.03□□□□□ -1.6
LRPPRC-201ENST00000260665 BSNQ9UPA5 3926 aa5.01□□□□□ -1.61
LRPPRC-201ENST00000260665 CSMD2Q7Z408 3487 aa4.99□□□□□ -1.61
LRPPRC-201ENST00000260665 TRRAPQ9Y4A5 3859 aa4.95□□□□□ -1.62
LRPPRC-201ENST00000260665 KRTAP8-1Q8IUC2 63 aa4.91□□□□□ -1.62
LRPPRC-201ENST00000260665 KRTAP10-4P60372 401 aaPredicted RBP4.9□□□□□ -1.62
LRPPRC-201ENST00000260665 NBPF19A0A087WUL8 3843 aa4.86□□□□□ -1.63
LRPPRC-201ENST00000260665 KRTAP4-5Q9BYR2 181 aa4.83□□□□□ -1.64
LRPPRC-201ENST00000260665 ANK3Q12955 4377 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms