RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 SPATA8Q6RVD6 105 aa8.23□□□□□ -1.09
ZC3H4-201ENST00000253048 Q6ZRN7 208 aaPredicted RBP8.22□□□□□ -1.09
ZC3H4-201ENST00000253048 A8MUU9 505 aa8.21□□□□□ -1.09
ZC3H4-201ENST00000253048 Q5VV11 94 aa8.19□□□□□ -1.1
ZC3H4-201ENST00000253048 ASPMQ8IZT6 3477 aa8.18□□□□□ -1.1
ZC3H4-201ENST00000253048 UTP20O75691 2785 aaKnown RBP8.17□□□□□ -1.1
ZC3H4-201ENST00000253048 ZANQ9Y493 2812 aa8.16□□□□□ -1.1
ZC3H4-201ENST00000253048 ZFHX4Q86UP3 3567 aa8.16□□□□□ -1.1
ZC3H4-201ENST00000253048 NBEAL1Q6ZS30 2694 aa8.16□□□□□ -1.1
ZC3H4-201ENST00000253048 Q5XG85 94 aa8.15□□□□□ -1.11
ZC3H4-201ENST00000253048 MUC3AQ02505 3323 aa8.14□□□□□ -1.11
ZC3H4-201ENST00000253048 TNP1P09430 55 aa8.12□□□□□ -1.11
ZC3H4-201ENST00000253048 ASB16-AS1Q495Z4 193 aa8.11□□□□□ -1.11
ZC3H4-201ENST00000253048 HRNRQ86YZ3 2850 aaPredicted RBP8.1□□□□□ -1.11
ZC3H4-201ENST00000253048 KRTAP4-16G5E9R7 235 aaPredicted RBP8.08□□□□□ -1.12
ZC3H4-201ENST00000253048 LAMA5O15230 3695 aa8.07□□□□□ -1.12
ZC3H4-201ENST00000253048 ITPR2Q14571 2701 aa8.06□□□□□ -1.12
ZC3H4-201ENST00000253048 DCHS1Q96JQ0 3298 aa8.06□□□□□ -1.12
ZC3H4-201ENST00000253048 KRTAP13-2Q52LG2 175 aa8.06□□□□□ -1.12
ZC3H4-201ENST00000253048 C10orf95Q9H7T3 257 aa8.05□□□□□ -1.12
ZC3H4-201ENST00000253048 NSD1Q96L73 2696 aaPredicted RBP8.05□□□□□ -1.12
ZC3H4-201ENST00000253048 CELSR2Q9HCU4 2923 aa8.04□□□□□ -1.12
ZC3H4-201ENST00000253048 RELNP78509 3460 aa8.02□□□□□ -1.12
ZC3H4-201ENST00000253048 KRTAP11-1Q8IUC1 163 aa8.02□□□□□ -1.13
ZC3H4-201ENST00000253048 P0C880 135 aa8.01□□□□□ -1.13
ZC3H4-201ENST00000253048 HIVEP1P15822 2718 aa8□□□□□ -1.13
ZC3H4-201ENST00000253048 APCP25054 2843 aa7.98□□□□□ -1.13
ZC3H4-201ENST00000253048 FBN2P35556 2912 aa7.98□□□□□ -1.13
ZC3H4-201ENST00000253048 A0A1B0GVY2 172 aa7.98□□□□□ -1.13
ZC3H4-201ENST00000253048 NOTCH2NLQ7Z3S9 236 aa7.98□□□□□ -1.13
ZC3H4-201ENST00000253048 SMG1Q96Q15 3661 aaKnown RBP7.96□□□□□ -1.14
ZC3H4-201ENST00000253048 NF1P21359 2839 aa7.96□□□□□ -1.14
ZC3H4-201ENST00000253048 CRYBG3Q68DQ2 2970 aa7.96□□□□□ -1.14
ZC3H4-201ENST00000253048 KRTAP25-1Q3LHN0 102 aa7.93□□□□□ -1.14
ZC3H4-201ENST00000253048 STAB2Q8WWQ8 2551 aa7.92□□□□□ -1.14
ZC3H4-201ENST00000253048 DCHS2Q6V1P9 2916 aa7.92□□□□□ -1.14
ZC3H4-201ENST00000253048 KRTAP10-8P60410 259 aa7.91□□□□□ -1.14
ZC3H4-201ENST00000253048 NDUFAF8A1L188 74 aa7.9□□□□□ -1.14
ZC3H4-201ENST00000253048 NIPBLQ6KC79 2804 aaeCLIP7.9□□□□□ -1.152e-7■□□□□ 9.2
ZC3H4-201ENST00000253048 KRTAP10-10P60014 251 aa7.89□□□□□ -1.15
ZC3H4-201ENST00000253048 KRTAP29-1A8MX34 341 aaPredicted RBP7.89□□□□□ -1.15
ZC3H4-201ENST00000253048 A8MU10 97 aa7.89□□□□□ -1.15
ZC3H4-201ENST00000253048 DMBT1Q9UGM3 2413 aaPredicted RBP7.86□□□□□ -1.15
ZC3H4-201ENST00000253048 KRTAP13-1Q8IUC0 172 aa7.85□□□□□ -1.15
ZC3H4-201ENST00000253048 CSMD1Q96PZ7 3565 aa7.84□□□□□ -1.15
ZC3H4-201ENST00000253048 PRO2289Q9P1D8 64 aa7.83□□□□□ -1.16
ZC3H4-201ENST00000253048 KRTAP7-1Q8IUC3 87 aa7.83□□□□□ -1.16
ZC3H4-201ENST00000253048 XP32Q5T750 250 aa7.82□□□□□ -1.16
ZC3H4-201ENST00000253048 TPRXLQ17RH7 258 aa7.8□□□□□ -1.16
ZC3H4-201ENST00000253048 MXRA5Q9NR99 2828 aa7.79□□□□□ -1.16
ZC3H4-201ENST00000253048 KMT2BQ9UMN6 2715 aaPredicted RBP7.76□□□□□ -1.17
ZC3H4-201ENST00000253048 PP632Q6XCG6 107 aa7.75□□□□□ -1.17
ZC3H4-201ENST00000253048 SPENQ96T58 3664 aaKnown RBP7.73□□□□□ -1.17
ZC3H4-201ENST00000253048 SVEP1Q4LDE5 3571 aa7.72□□□□□ -1.17
ZC3H4-201ENST00000253048 KRTAP1-4P0C5Y4 121 aa7.62□□□□□ -1.19
ZC3H4-201ENST00000253048 CELSR1Q9NYQ6 3014 aa7.62□□□□□ -1.19
ZC3H4-201ENST00000253048 BSNQ9UPA5 3926 aa7.6□□□□□ -1.19
ZC3H4-201ENST00000253048 TENM4Q6N022 2769 aa7.58□□□□□ -1.2
ZC3H4-201ENST00000253048 A6NN06 94 aa7.54□□□□□ -1.2
ZC3H4-201ENST00000253048 KRTAP13-3Q3SY46 172 aa7.52□□□□□ -1.21
ZC3H4-201ENST00000253048 CUBNO60494 3623 aa7.51□□□□□ -1.21
ZC3H4-201ENST00000253048 TENM3Q9P273 2699 aa7.49□□□□□ -1.21
ZC3H4-201ENST00000253048 TENM1Q9UKZ4 2725 aa7.41□□□□□ -1.22
ZC3H4-201ENST00000253048 VWFP04275 2813 aa7.35□□□□□ -1.23
ZC3H4-201ENST00000253048 NBPF19A0A087WUL8 3843 aa7.33□□□□□ -1.24
ZC3H4-201ENST00000253048 PDZD2O15018 2839 aa7.32□□□□□ -1.24
ZC3H4-201ENST00000253048 CSMD2Q7Z408 3487 aa7.31□□□□□ -1.24
ZC3H4-201ENST00000253048 FBN1P35555 2871 aaKnown RBP7.29□□□□□ -1.24
ZC3H4-201ENST00000253048 ZFHX3Q15911 3703 aa7.29□□□□□ -1.24
ZC3H4-201ENST00000253048 VPS13CQ709C8 3753 aa7.29□□□□□ -1.24
ZC3H4-201ENST00000253048 OTOGQ6ZRI0 2925 aa7.2□□□□□ -1.26
ZC3H4-201ENST00000253048 PKD1L1Q8TDX9 2849 aa7.18□□□□□ -1.26
ZC3H4-201ENST00000253048 TGP01266 2768 aa7.14□□□□□ -1.27
ZC3H4-201ENST00000253048 TENM2Q9NT68 2774 aa7.13□□□□□ -1.27
ZC3H4-201ENST00000253048 H0YAA0 97 aa7.04□□□□□ -1.28
ZC3H4-201ENST00000253048 KRTAP12-2P59991 146 aa7.03□□□□□ -1.28
ZC3H4-201ENST00000253048 TRRAPQ9Y4A5 3859 aa7.03□□□□□ -1.28
ZC3H4-201ENST00000253048 ANK3Q12955 4377 aaKnown RBP7.01□□□□□ -1.29
ZC3H4-201ENST00000253048 KRTAP15-1Q3LI76 137 aa6.94□□□□□ -1.3
ZC3H4-201ENST00000253048 ZNF469Q96JG9 3925 aaPredicted RBP6.92□□□□□ -1.3
ZC3H4-201ENST00000253048 SRRM2Q9UQ35 2752 aaKnown RBP6.87□□□□□ -1.31
ZC3H4-201ENST00000253048 FBN3Q75N90 2809 aa6.87□□□□□ -1.31
ZC3H4-201ENST00000253048 AKAP9Q99996 3911 aa6.87□□□□□ -1.31
ZC3H4-201ENST00000253048 KRTAP13-4Q3LI77 160 aa6.83□□□□□ -1.32
ZC3H4-201ENST00000253048 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
ZC3H4-201ENST00000253048 MEGF8Q7Z7M0 2845 aa6.7□□□□□ -1.34
ZC3H4-201ENST00000253048 MT1HL1P0DM35 61 aa6.65□□□□□ -1.34
ZC3H4-201ENST00000253048 KRTAP4-5Q9BYR2 181 aa6.63□□□□□ -1.35
ZC3H4-201ENST00000253048 KRTAP12-1P59990 96 aa6.62□□□□□ -1.35
ZC3H4-201ENST00000253048 COL7A1Q02388 2944 aa6.62□□□□□ -1.35
ZC3H4-201ENST00000253048 KRTAP3-1Q9BYR8 98 aa6.59□□□□□ -1.35
ZC3H4-201ENST00000253048 CSMD3Q7Z407 3707 aa6.59□□□□□ -1.35
ZC3H4-201ENST00000253048 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
ZC3H4-201ENST00000253048 INE1O15225 51 aa6.54□□□□□ -1.36
ZC3H4-201ENST00000253048 HUWE1Q7Z6Z7 4374 aaKnown RBP6.53□□□□□ -1.36
ZC3H4-201ENST00000253048 LORP23490 312 aaPredicted RBP6.41□□□□□ -1.38
ZC3H4-201ENST00000253048 KRTAP10-6P60371 365 aaPredicted RBP6.4□□□□□ -1.38
ZC3H4-201ENST00000253048 KRTAP8-1Q8IUC2 63 aa6.37□□□□□ -1.39
ZC3H4-201ENST00000253048 ALMS1Q8TCU4 4167 aa6.3□□□□□ -1.4
ZC3H4-201ENST00000253048 DNAH10Q8IVF4 4471 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms