RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 MT1HL1P0DM35 61 aa7.46□□□□□ -1.22
LSM8-201ENST00000249299 FAT3Q8TDW7 4589 aa7.45□□□□□ -1.22
LSM8-201ENST00000249299 LRP1Q07954 4544 aaKnown RBP7.45□□□□□ -1.22
LSM8-201ENST00000249299 HRCT1Q6UXD1 115 aa7.45□□□□□ -1.22
LSM8-201ENST00000249299 Q6ZVQ6 151 aa7.44□□□□□ -1.22
LSM8-201ENST00000249299 MYCBP2O75592 4640 aa7.44□□□□□ -1.22
LSM8-201ENST00000249299 J3KT08 172 aa7.43□□□□□ -1.22
LSM8-201ENST00000249299 LINC00643Q86TS7 51 aa7.43□□□□□ -1.22
LSM8-201ENST00000249299 ATP5EP2Q5VTU8 51 aa7.42□□□□□ -1.22
LSM8-201ENST00000249299 LINC00472Q9H8W2 130 aa7.42□□□□□ -1.22
LSM8-201ENST00000249299 CXCL6P80162 114 aa7.4□□□□□ -1.22
LSM8-201ENST00000249299 TNXBP22105 4242 aa7.4□□□□□ -1.22
LSM8-201ENST00000249299 ABCA13Q86UQ4 5058 aa7.38□□□□□ -1.23
LSM8-201ENST00000249299 LCE5AQ5TCM9 118 aa7.38□□□□□ -1.23
LSM8-201ENST00000249299 BPY2O14599 106 aa7.37□□□□□ -1.23
LSM8-201ENST00000249299 Q96NJ1 140 aa7.37□□□□□ -1.23
LSM8-201ENST00000249299 SIGMAR1Q99720 223 aa7.37□□□□□ -1.23
LSM8-201ENST00000249299 C1orf195Q5TG92 126 aa7.36□□□□□ -1.23
LSM8-201ENST00000249299 DMBT1Q9UGM3 2413 aaPredicted RBP7.35□□□□□ -1.23
LSM8-201ENST00000249299 FP248Q71RG6 208 aaPredicted RBP7.33□□□□□ -1.24
LSM8-201ENST00000249299 KRTAP3-1Q9BYR8 98 aa7.33□□□□□ -1.24
LSM8-201ENST00000249299 A8MWP4 228 aa7.32□□□□□ -1.24
LSM8-201ENST00000249299 NDUFB1O75438 58 aa7.32□□□□□ -1.24
LSM8-201ENST00000249299 IGKV4-1P06312 121 aa7.32□□□□□ -1.24
LSM8-201ENST00000249299 IMUPQ9GZP8 106 aa7.32□□□□□ -1.24
LSM8-201ENST00000249299 DSCR10P59022 87 aa7.3□□□□□ -1.24
LSM8-201ENST00000249299 KRTAP5-3Q6L8H2 238 aa7.3□□□□□ -1.24
LSM8-201ENST00000249299 PRR15Q8IV56 129 aa7.28□□□□□ -1.24
LSM8-201ENST00000249299 DEFB116Q30KQ4 102 aa7.27□□□□□ -1.24
LSM8-201ENST00000249299 IGKV3D-7A0A0C4DH55 119 aa7.27□□□□□ -1.25
LSM8-201ENST00000249299 A0A1B0GVX0 72 aa7.27□□□□□ -1.25
LSM8-201ENST00000249299 C8orf87E5RJ46 101 aa7.26□□□□□ -1.25
LSM8-201ENST00000249299 K7EQZ3 153 aa7.24□□□□□ -1.25
LSM8-201ENST00000249299 MT-ATP8P03928 68 aa7.24□□□□□ -1.25
LSM8-201ENST00000249299 KRTAP9-3Q9BYQ3 159 aa7.23□□□□□ -1.25
LSM8-201ENST00000249299 HIST1H4AP62805 103 aaKnown RBP7.21□□□□□ -1.26
LSM8-201ENST00000249299 PCLOQ9Y6V0 5065 aa7.2□□□□□ -1.26
LSM8-201ENST00000249299 IGHV6-1A0A0B4J1U7 121 aa7.2□□□□□ -1.26
LSM8-201ENST00000249299 RETNLBQ9BQ08 111 aa7.2□□□□□ -1.26
LSM8-201ENST00000249299 IGLV7-46A0A075B6I9 117 aa7.19□□□□□ -1.26
LSM8-201ENST00000249299 LINC00313P59037 77 aa7.19□□□□□ -1.26
LSM8-201ENST00000249299 Q8N9L7 120 aa7.19□□□□□ -1.26
LSM8-201ENST00000249299 C8orf17Q9NRJ1 99 aa7.19□□□□□ -1.26
LSM8-201ENST00000249299 HCG22E2RYF7 251 aa7.17□□□□□ -1.26
LSM8-201ENST00000249299 MMP24-AS1A0A0U1RRL7 71 aa7.16□□□□□ -1.26
LSM8-201ENST00000249299 TPRXLQ17RH7 258 aa7.16□□□□□ -1.26
LSM8-201ENST00000249299 hDV103S1A0JD37 113 aa7.15□□□□□ -1.26
LSM8-201ENST00000249299 PRR4Q16378 134 aa7.15□□□□□ -1.26
LSM8-201ENST00000249299 KRTAP9-8Q9BYQ0 159 aa7.15□□□□□ -1.26
LSM8-201ENST00000249299 CASC2Q6XLA1 102 aa7.14□□□□□ -1.27
LSM8-201ENST00000249299 TMEM254Q8TBM7 123 aa7.14□□□□□ -1.27
LSM8-201ENST00000249299 KRTAP13-3Q3SY46 172 aa7.13□□□□□ -1.27
LSM8-201ENST00000249299 A0A087WVE0 104 aa7.12□□□□□ -1.27
LSM8-201ENST00000249299 NOTCH2NLQ7Z3S9 236 aa7.11□□□□□ -1.27
LSM8-201ENST00000249299 MRPL34Q9BQ48 92 aaKnown RBP7.11□□□□□ -1.27
LSM8-201ENST00000249299 KRTAP16-1A8MUX0 517 aa7.1□□□□□ -1.27
LSM8-201ENST00000249299 SCGB1A1P11684 91 aa7.1□□□□□ -1.27
LSM8-201ENST00000249299 Q8N9P0 234 aaPredicted RBP7.1□□□□□ -1.27
LSM8-201ENST00000249299 KRTAP23-1A1A580 65 aa7.08□□□□□ -1.28
LSM8-201ENST00000249299 C20orf166-AS1Q96NR2 134 aa7.08□□□□□ -1.28
LSM8-201ENST00000249299 WFDC13Q8IUB5 93 aa7.07□□□□□ -1.28
LSM8-201ENST00000249299 SMIM20Q8N5G0 67 aa7.07□□□□□ -1.28
LSM8-201ENST00000249299 TP53AIP1Q9HCN2 124 aa7.07□□□□□ -1.28
LSM8-201ENST00000249299 FAM236AA0A1B0GUQ0 79 aa7.06□□□□□ -1.28
LSM8-201ENST00000249299 FAM236BA0A1B0GV22 79 aa7.06□□□□□ -1.28
LSM8-201ENST00000249299 C9orf92A6NGG3 77 aa7.05□□□□□ -1.28
LSM8-201ENST00000249299 A8MUU9 505 aa7.05□□□□□ -1.28
LSM8-201ENST00000249299 ATOX1O00244 68 aa7.05□□□□□ -1.28
LSM8-201ENST00000249299 Q75L30 129 aa7.05□□□□□ -1.28
LSM8-201ENST00000249299 HERC1Q15751 4861 aa7.02□□□□□ -1.28
LSM8-201ENST00000249299 UQCRQO14949 82 aa7.01□□□□□ -1.29
LSM8-201ENST00000249299 OCR1Q9BZK8 76 aa7.01□□□□□ -1.29
LSM8-201ENST00000249299 NDUFS5O43920 106 aa6.99□□□□□ -1.29
LSM8-201ENST00000249299 RPL37P61927 97 aaKnown RBP6.99□□□□□ -1.29
LSM8-201ENST00000249299 TRAV7A0A075B6U4 112 aa6.98□□□□□ -1.29
LSM8-201ENST00000249299 C5orf47Q569G3 176 aa6.95□□□□□ -1.3
LSM8-201ENST00000249299 ATP11AUNQ6ZP68 121 aa6.95□□□□□ -1.3
LSM8-201ENST00000249299 SERP2Q8N6R1 65 aa6.95□□□□□ -1.3
LSM8-201ENST00000249299 ZCCHC13Q8WW36 166 aaKnown RBP6.95□□□□□ -1.3
LSM8-201ENST00000249299 HMCN2Q8NDA2 5059 aa6.95□□□□□ -1.3
LSM8-201ENST00000249299 TRAV22A0A0B4J277 110 aa6.93□□□□□ -1.3
LSM8-201ENST00000249299 H3BPC8 53 aa6.92□□□□□ -1.3
LSM8-201ENST00000249299 SEC61BP60468 96 aaKnown RBP6.91□□□□□ -1.3
LSM8-201ENST00000249299 MP68P56378 58 aa6.89□□□□□ -1.31
LSM8-201ENST00000249299 ANAPC13Q9BS18 74 aa6.89□□□□□ -1.31
LSM8-201ENST00000249299 Q5W150 140 aa6.88□□□□□ -1.31
LSM8-201ENST00000249299 H0Y9P7 68 aa6.86□□□□□ -1.31
LSM8-201ENST00000249299 COX7CP15954 63 aa6.86□□□□□ -1.31
LSM8-201ENST00000249299 LPAP08519 4548 aa6.86□□□□□ -1.31
LSM8-201ENST00000249299 LRP2P98164 4655 aa6.86□□□□□ -1.31
LSM8-201ENST00000249299 LOC101927531A0A1B0GV80 90 aa6.84□□□□□ -1.31
LSM8-201ENST00000249299 PCOTHQ58A44 107 aa6.82□□□□□ -1.32
LSM8-201ENST00000249299 IGKV2-30P06310 120 aa6.81□□□□□ -1.32
LSM8-201ENST00000249299 C1orf64Q8NEQ6 169 aa6.81□□□□□ -1.32
LSM8-201ENST00000249299 C7orf65Q6ZTY9 151 aa6.8□□□□□ -1.32
LSM8-201ENST00000249299 LINC00208Q96KT6 92 aa6.8□□□□□ -1.32
LSM8-201ENST00000249299 A0A0U1RQV1 116 aa6.79□□□□□ -1.32
LSM8-201ENST00000249299 KLKP1Q107X0 134 aa6.79□□□□□ -1.32
LSM8-201ENST00000249299 SPINK7P58062 85 aa6.77□□□□□ -1.32
LSM8-201ENST00000249299 CYP4F30PQ9H0H9 118 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms