RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 CIRBP-AS1Q8TBR5 109 aa15.13■□□□□ 0.01
RAB40C-201ENST00000248139 CDK2AP2O75956 126 aa15.12■□□□□ 0.01
RAB40C-201ENST00000248139 SPANXA2-OT1Q8N9U9 137 aa15.1■□□□□ 0.01
RAB40C-201ENST00000248139 IGLV7-43P04211 117 aa15.1■□□□□ 0.01
RAB40C-201ENST00000248139 HYDINQ4G0P3 5121 aa15.08■□□□□ 0
RAB40C-201ENST00000248139 KRTAP10-2P60368 255 aa15.08■□□□□ 0
RAB40C-201ENST00000248139 CD164Q04900 197 aa15.08■□□□□ 0
RAB40C-201ENST00000248139 LRP1BQ9NZR2 4599 aa15.07■□□□□ 0
RAB40C-201ENST00000248139 A8MUN3 132 aa15.07■□□□□ 0
RAB40C-201ENST00000248139 MRPL34Q9BQ48 92 aaKnown RBP15.04■□□□□ -0
RAB40C-201ENST00000248139 TP53AIP1Q9HCN2 124 aa15.02■□□□□ -0
RAB40C-201ENST00000248139 IGLV7-46A0A075B6I9 117 aa14.99□□□□□ -0.01
RAB40C-201ENST00000248139 COA5Q86WW8 74 aa14.98□□□□□ -0.01
RAB40C-201ENST00000248139 Q8N9P0 234 aaPredicted RBP14.95□□□□□ -0.02
RAB40C-201ENST00000248139 Q5W150 140 aa14.94□□□□□ -0.02
RAB40C-201ENST00000248139 A8MU10 97 aa14.94□□□□□ -0.02
RAB40C-201ENST00000248139 PKD1P98161 4303 aa14.92□□□□□ -0.02
RAB40C-201ENST00000248139 Q5VV11 94 aa14.89□□□□□ -0.03
RAB40C-201ENST00000248139 FAT2Q9NYQ8 4349 aa14.89□□□□□ -0.03
RAB40C-201ENST00000248139 PRR15LQ9BU68 103 aa14.86□□□□□ -0.03
RAB40C-201ENST00000248139 KRTAP10-1P60331 282 aa14.84□□□□□ -0.03
RAB40C-201ENST00000248139 RETNLBQ9BQ08 111 aa14.84□□□□□ -0.03
RAB40C-201ENST00000248139 VPS13BQ7Z7G8 4022 aa14.84□□□□□ -0.03
RAB40C-201ENST00000248139 V9GYY9 64 aa14.82□□□□□ -0.04
RAB40C-201ENST00000248139 KRTAP13-2Q52LG2 175 aa14.81□□□□□ -0.04
RAB40C-201ENST00000248139 CHKB-CPT1BH3BT56 60 aa14.79□□□□□ -0.04
RAB40C-201ENST00000248139 SPAG11AQ6PDA7 123 aa14.79□□□□□ -0.04
RAB40C-201ENST00000248139 SSBP3-AS1Q7Z2R9 100 aa14.79□□□□□ -0.04
RAB40C-201ENST00000248139 HRES1P13985 223 aa14.78□□□□□ -0.04
RAB40C-201ENST00000248139 LIMD2Q9BT23 127 aa14.75□□□□□ -0.05
RAB40C-201ENST00000248139 KRTAP13-3Q3SY46 172 aa14.74□□□□□ -0.05
RAB40C-201ENST00000248139 C1orf195Q5TG92 126 aa14.73□□□□□ -0.05
RAB40C-201ENST00000248139 LINC00313P59037 77 aa14.69□□□□□ -0.06
RAB40C-201ENST00000248139 PKHD1P08F94 4074 aa14.68□□□□□ -0.06
RAB40C-201ENST00000248139 LOC101927531A0A1B0GV80 90 aa14.68□□□□□ -0.06
RAB40C-201ENST00000248139 Q6ZSA8 131 aa14.66□□□□□ -0.06
RAB40C-201ENST00000248139 PRR26Q8N8Z3 221 aa14.65□□□□□ -0.06
RAB40C-201ENST00000248139 C8orf87E5RJ46 101 aa14.6□□□□□ -0.07
RAB40C-201ENST00000248139 KRTAP1-4P0C5Y4 121 aa14.6□□□□□ -0.07
RAB40C-201ENST00000248139 A6NED7 52 aa14.59□□□□□ -0.07
RAB40C-201ENST00000248139 LCA10Q71F78 164 aa14.56□□□□□ -0.08
RAB40C-201ENST00000248139 Q75L30 129 aa14.55□□□□□ -0.08
RAB40C-201ENST00000248139 LINC01558Q9Y6Z2 57 aa14.53□□□□□ -0.08
RAB40C-201ENST00000248139 PLA2G1BP04054 148 aaKnown RBP14.51□□□□□ -0.09
RAB40C-201ENST00000248139 SPTSSBQ8NFR3 76 aa14.51□□□□□ -0.09
RAB40C-201ENST00000248139 KRTAP16-1A8MUX0 517 aa14.48□□□□□ -0.09
RAB40C-201ENST00000248139 SACSQ9NZJ4 4579 aa14.48□□□□□ -0.09
RAB40C-201ENST00000248139 FAM229AH3BQW9 127 aa14.48□□□□□ -0.09
RAB40C-201ENST00000248139 SPINK7P58062 85 aa14.45□□□□□ -0.1
RAB40C-201ENST00000248139 PMAIP1Q13794 54 aa14.44□□□□□ -0.1
RAB40C-201ENST00000248139 TYMSOSQ8TAI1 123 aa14.43□□□□□ -0.1
RAB40C-201ENST00000248139 ACYP2P14621 99 aa14.42□□□□□ -0.1
RAB40C-201ENST00000248139 IGKV2D-30A0A075B6S6 120 aa14.41□□□□□ -0.1
RAB40C-201ENST00000248139 IGKV2-30P06310 120 aa14.41□□□□□ -0.1
RAB40C-201ENST00000248139 FAT1Q14517 4588 aa14.41□□□□□ -0.1
RAB40C-201ENST00000248139 C4orf48Q5BLP8 95 aa14.4□□□□□ -0.1
RAB40C-201ENST00000248139 DYNC1H1Q14204 4646 aaKnown RBP14.37□□□□□ -0.11
RAB40C-201ENST00000248139 DMAC1Q96GE9 116 aa14.37□□□□□ -0.11
RAB40C-201ENST00000248139 SMR3BP02814 79 aaPredicted RBP14.36□□□□□ -0.11
RAB40C-201ENST00000248139 CDC42SE1Q9NRR8 79 aa14.29□□□□□ -0.12
RAB40C-201ENST00000248139 SPINK1P00995 79 aa14.24□□□□□ -0.13
RAB40C-201ENST00000248139 ATP11AUNQ6ZP68 121 aa14.23□□□□□ -0.13
RAB40C-201ENST00000248139 LINC00304Q8N9R0 145 aa14.18□□□□□ -0.14
RAB40C-201ENST00000248139 C7orf65Q6ZTY9 151 aa14.17□□□□□ -0.14
RAB40C-201ENST00000248139 APOBP04114 4563 aaKnown RBP14.14□□□□□ -0.15
RAB40C-201ENST00000248139 C9orf92A6NGG3 77 aa14.11□□□□□ -0.15
RAB40C-201ENST00000248139 Q8N1X5 172 aa14.11□□□□□ -0.15
RAB40C-201ENST00000248139 A0A1B0GU69 56 aa14.1□□□□□ -0.15
RAB40C-201ENST00000248139 A6NN06 94 aa14.1□□□□□ -0.15
RAB40C-201ENST00000248139 KTN1-AS1Q86SY8 53 aa13.99□□□□□ -0.17
RAB40C-201ENST00000248139 PKHD1L1Q86WI1 4243 aa13.99□□□□□ -0.17
RAB40C-201ENST00000248139 KMT2CQ8NEZ4 4911 aaKnown RBP13.97□□□□□ -0.17
RAB40C-201ENST00000248139 SEC61GP60059 68 aa13.95□□□□□ -0.18
RAB40C-201ENST00000248139 KRTAP10-4P60372 401 aaPredicted RBP13.91□□□□□ -0.18
RAB40C-201ENST00000248139 RYR2Q92736 4967 aa13.91□□□□□ -0.18
RAB40C-201ENST00000248139 A0A1B0GVY2 172 aa13.9□□□□□ -0.18
RAB40C-201ENST00000248139 RPS29P62273 56 aaKnown RBP13.87□□□□□ -0.19
RAB40C-201ENST00000248139 LRP1Q07954 4544 aaKnown RBP13.86□□□□□ -0.19
RAB40C-201ENST00000248139 MIR22HGQ0VDD5 57 aa13.8□□□□□ -0.2
RAB40C-201ENST00000248139 SPATA8Q6RVD6 105 aa13.78□□□□□ -0.2
RAB40C-201ENST00000248139 UQCR11O14957 56 aa13.78□□□□□ -0.2
RAB40C-201ENST00000248139 A8MUU9 505 aa13.77□□□□□ -0.2
RAB40C-201ENST00000248139 C20orf166-AS1Q96NR2 134 aa13.77□□□□□ -0.21
RAB40C-201ENST00000248139 KRTAP21-3Q3LHN1 58 aa13.75□□□□□ -0.21
RAB40C-201ENST00000248139 FLG2Q5D862 2391 aaPredicted RBP13.75□□□□□ -0.21
RAB40C-201ENST00000248139 KRTAP3-1Q9BYR8 98 aa13.74□□□□□ -0.21
RAB40C-201ENST00000248139 RBM12B-AS1Q9P1G2 102 aa13.73□□□□□ -0.21
RAB40C-201ENST00000248139 ADM2Q7Z4H4 148 aa13.7□□□□□ -0.22
RAB40C-201ENST00000248139 PRAC1Q96KF2 57 aa13.68□□□□□ -0.22
RAB40C-201ENST00000248139 FAT3Q8TDW7 4589 aa13.68□□□□□ -0.22
RAB40C-201ENST00000248139 MYCBP2O75592 4640 aa13.66□□□□□ -0.22
RAB40C-201ENST00000248139 HSPG2P98160 4391 aa13.62□□□□□ -0.23
RAB40C-201ENST00000248139 TNXBP22105 4242 aa13.62□□□□□ -0.23
RAB40C-201ENST00000248139 DMBT1Q9UGM3 2413 aaPredicted RBP13.59□□□□□ -0.23
RAB40C-201ENST00000248139 RYR3Q15413 4870 aa13.49□□□□□ -0.25
RAB40C-201ENST00000248139 H0YAA0 97 aa13.45□□□□□ -0.26
RAB40C-201ENST00000248139 Q5VSD8 79 aa13.37□□□□□ -0.27
RAB40C-201ENST00000248139 COX6B2Q6YFQ2 88 aa13.37□□□□□ -0.27
RAB40C-201ENST00000248139 KRTAP17-1Q9BYP8 105 aa13.36□□□□□ -0.27
RAB40C-201ENST00000248139 A0A1B0GU33 70 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms