RNA–Protein interactions for RNA: ENST00000237596.6

PKD2-201, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD2, Length 5,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-201ENST00000237596 CRYBG3Q68DQ2 2970 aa10.94□□□□□ -0.66
PKD2-201ENST00000237596 KRTAP11-1Q8IUC1 163 aa10.89□□□□□ -0.67
PKD2-201ENST00000237596 KRTAP29-1A8MX34 341 aaPredicted RBP10.88□□□□□ -0.67
PKD2-201ENST00000237596 USP34Q70CQ2 3546 aa10.88□□□□□ -0.67
PKD2-201ENST00000237596 DMXL1Q9Y485 3027 aa10.86□□□□□ -0.67
PKD2-201ENST00000237596 DCHS2Q6V1P9 2916 aa10.83□□□□□ -0.68
PKD2-201ENST00000237596 M0QZ58 72 aa10.82□□□□□ -0.68
PKD2-201ENST00000237596 NOTCH2NLQ7Z3S9 236 aa10.81□□□□□ -0.68
PKD2-201ENST00000237596 RPL37P61927 97 aaKnown RBP10.8□□□□□ -0.68
PKD2-201ENST00000237596 TNRC18O15417 2968 aaPredicted RBP10.79□□□□□ -0.68
PKD2-201ENST00000237596 KRTAP7-1Q8IUC3 87 aa10.79□□□□□ -0.68
PKD2-201ENST00000237596 KRTAP21-3Q3LHN1 58 aa10.79□□□□□ -0.68
PKD2-201ENST00000237596 ASB16-AS1Q495Z4 193 aa10.77□□□□□ -0.69
PKD2-201ENST00000237596 RPS29P62273 56 aaKnown RBP10.76□□□□□ -0.69
PKD2-201ENST00000237596 TENM3Q9P273 2699 aa10.75□□□□□ -0.69
PKD2-201ENST00000237596 NF1P21359 2839 aa10.73□□□□□ -0.69
PKD2-201ENST00000237596 FBN2P35556 2912 aa10.73□□□□□ -0.69
PKD2-201ENST00000237596 H1FX-AS1Q4G0G2 97 aa10.72□□□□□ -0.69
PKD2-201ENST00000237596 HRNRQ86YZ3 2850 aaPredicted RBP10.72□□□□□ -0.69
PKD2-201ENST00000237596 KRTAP13-2Q52LG2 175 aa10.69□□□□□ -0.7
PKD2-201ENST00000237596 ADM2Q7Z4H4 148 aa10.69□□□□□ -0.7
PKD2-201ENST00000237596 WDFY3Q8IZQ1 3526 aa10.68□□□□□ -0.7
PKD2-201ENST00000237596 KRTAP13-1Q8IUC0 172 aa10.66□□□□□ -0.7
PKD2-201ENST00000237596 A8MU10 97 aa10.65□□□□□ -0.7
PKD2-201ENST00000237596 H3BS24 57 aa10.65□□□□□ -0.7
PKD2-201ENST00000237596 DCHS1Q96JQ0 3298 aa10.64□□□□□ -0.71
PKD2-201ENST00000237596 PLAC4Q8WY50 150 aa10.61□□□□□ -0.71
PKD2-201ENST00000237596 ROMO1P60602 79 aa10.6□□□□□ -0.71
PKD2-201ENST00000237596 SPATA8Q6RVD6 105 aa10.6□□□□□ -0.71
PKD2-201ENST00000237596 TENM1Q9UKZ4 2725 aa10.56□□□□□ -0.72
PKD2-201ENST00000237596 A6NN06 94 aa10.5□□□□□ -0.73
PKD2-201ENST00000237596 A8MUU9 505 aa10.42□□□□□ -0.74
PKD2-201ENST00000237596 MXRA5Q9NR99 2828 aa10.41□□□□□ -0.74
PKD2-201ENST00000237596 C20orf166-AS1Q96NR2 134 aa10.4□□□□□ -0.74
PKD2-201ENST00000237596 RELNP78509 3460 aa10.4□□□□□ -0.74
PKD2-201ENST00000237596 ZFHX4Q86UP3 3567 aa10.38□□□□□ -0.75
PKD2-201ENST00000237596 A0A0A0MQY5 61 aa10.38□□□□□ -0.75
PKD2-201ENST00000237596 ASPMQ8IZT6 3477 aa10.38□□□□□ -0.75
PKD2-201ENST00000237596 TENM2Q9NT68 2774 aa10.33□□□□□ -0.76
PKD2-201ENST00000237596 PKD1L1Q8TDX9 2849 aa10.3□□□□□ -0.76
PKD2-201ENST00000237596 MUC3AQ02505 3323 aa10.24□□□□□ -0.77
PKD2-201ENST00000237596 KRTAP1-4P0C5Y4 121 aa10.22□□□□□ -0.77
PKD2-201ENST00000237596 CELSR1Q9NYQ6 3014 aa10.22□□□□□ -0.77
PKD2-201ENST00000237596 LAMA5O15230 3695 aa10.21□□□□□ -0.78
PKD2-201ENST00000237596 CSMD1Q96PZ7 3565 aa10.2□□□□□ -0.78
PKD2-201ENST00000237596 XP32Q5T750 250 aa10.11□□□□□ -0.79
PKD2-201ENST00000237596 KRTAP25-1Q3LHN0 102 aa10.09□□□□□ -0.79
PKD2-201ENST00000237596 SMG1Q96Q15 3661 aaKnown RBP10.07□□□□□ -0.8
PKD2-201ENST00000237596 VWFP04275 2813 aa10.05□□□□□ -0.8
PKD2-201ENST00000237596 TNP1P09430 55 aa10□□□□□ -0.81
PKD2-201ENST00000237596 DMDP11532 3685 aa10□□□□□ -0.81
PKD2-201ENST00000237596 PDZD2O15018 2839 aa9.98□□□□□ -0.81
PKD2-201ENST00000237596 TGP01266 2768 aa9.97□□□□□ -0.81
PKD2-201ENST00000237596 TPRXLQ17RH7 258 aa9.96□□□□□ -0.82
PKD2-201ENST00000237596 CUBNO60494 3623 aa9.94□□□□□ -0.82
PKD2-201ENST00000237596 SVEP1Q4LDE5 3571 aa9.9□□□□□ -0.82
PKD2-201ENST00000237596 A0A1B0GVY2 172 aa9.88□□□□□ -0.83
PKD2-201ENST00000237596 SRRM2Q9UQ35 2752 aaKnown RBP9.85□□□□□ -0.83
PKD2-201ENST00000237596 KRTAP10-8P60410 259 aa9.82□□□□□ -0.84
PKD2-201ENST00000237596 KRTAP16-1A8MUX0 517 aa9.8□□□□□ -0.84
PKD2-201ENST00000237596 KRTAP13-3Q3SY46 172 aa9.8□□□□□ -0.84
PKD2-201ENST00000237596 NDUFAF8A1L188 74 aa9.79□□□□□ -0.84
PKD2-201ENST00000237596 FBN1P35555 2871 aaKnown RBP9.77□□□□□ -0.85
PKD2-201ENST00000237596 KRTAP10-10P60014 251 aa9.72□□□□□ -0.85
PKD2-201ENST00000237596 H0YAA0 97 aa9.68□□□□□ -0.86
PKD2-201ENST00000237596 C10orf95Q9H7T3 257 aa9.64□□□□□ -0.87
PKD2-201ENST00000237596 PP632Q6XCG6 107 aa9.64□□□□□ -0.87
PKD2-201ENST00000237596 SPENQ96T58 3664 aaKnown RBP9.58□□□□□ -0.88
PKD2-201ENST00000237596 P0C880 135 aa9.55□□□□□ -0.88
PKD2-201ENST00000237596 OTOGQ6ZRI0 2925 aa9.54□□□□□ -0.88
PKD2-201ENST00000237596 PRO2289Q9P1D8 64 aa9.49□□□□□ -0.89
PKD2-201ENST00000237596 ZFHX3Q15911 3703 aa9.43□□□□□ -0.9
PKD2-201ENST00000237596 CSMD2Q7Z408 3487 aa9.39□□□□□ -0.91
PKD2-201ENST00000237596 NBPF19A0A087WUL8 3843 aa9.37□□□□□ -0.91
PKD2-201ENST00000237596 FBN3Q75N90 2809 aa9.36□□□□□ -0.91
PKD2-201ENST00000237596 COL7A1Q02388 2944 aa9.26□□□□□ -0.93
PKD2-201ENST00000237596 MEGF8Q7Z7M0 2845 aa9.17□□□□□ -0.94
PKD2-201ENST00000237596 TRRAPQ9Y4A5 3859 aa9.13□□□□□ -0.95
PKD2-201ENST00000237596 KRTAP12-2P59991 146 aa9.07□□□□□ -0.96
PKD2-201ENST00000237596 BSNQ9UPA5 3926 aa9.05□□□□□ -0.96
PKD2-201ENST00000237596 KRTAP3-1Q9BYR8 98 aa9.03□□□□□ -0.96
PKD2-201ENST00000237596 ANK3Q12955 4377 aaKnown RBP8.96□□□□□ -0.98
PKD2-201ENST00000237596 KRTAP12-1P59990 96 aa8.95□□□□□ -0.98
PKD2-201ENST00000237596 KRTAP13-4Q3LI77 160 aa8.95□□□□□ -0.98
PKD2-201ENST00000237596 VPS13CQ709C8 3753 aa8.91□□□□□ -0.98
PKD2-201ENST00000237596 MT1HL1P0DM35 61 aa8.89□□□□□ -0.99
PKD2-201ENST00000237596 KRTAP10-6P60371 365 aaPredicted RBP8.76□□□□□ -1.01
PKD2-201ENST00000237596 KRTAP4-5Q9BYR2 181 aa8.65□□□□□ -1.02
PKD2-201ENST00000237596 CSMD3Q7Z407 3707 aa8.65□□□□□ -1.02
PKD2-201ENST00000237596 KRTAP10-4P60372 401 aaPredicted RBP8.62□□□□□ -1.03
PKD2-201ENST00000237596 KRTAP15-1Q3LI76 137 aa8.58□□□□□ -1.04
PKD2-201ENST00000237596 KRTAP3-2Q9BYR7 98 aa8.48□□□□□ -1.05
PKD2-201ENST00000237596 KRTAP3-3Q9BYR6 98 aa8.46□□□□□ -1.06
PKD2-201ENST00000237596 ZNF469Q96JG9 3925 aaPredicted RBP8.45□□□□□ -1.06
PKD2-201ENST00000237596 HUWE1Q7Z6Z7 4374 aaKnown RBP8.4□□□□□ -1.06
PKD2-201ENST00000237596 AKAP9Q99996 3911 aa8.33□□□□□ -1.08
PKD2-201ENST00000237596 KRTAP10-12P60413 245 aa8.32□□□□□ -1.08
PKD2-201ENST00000237596 CRCT1Q9UGL9 99 aa8.12□□□□□ -1.11
PKD2-201ENST00000237596 KRTAP12-3P60328 96 aa8.07□□□□□ -1.12
PKD2-201ENST00000237596 DNAH5Q8TE73 4624 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms