RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 Q5VV11 94 aa10.26□□□□□ -0.77
SLC1A4-201ENST00000234256 KRTAP11-1Q8IUC1 163 aa10.24□□□□□ -0.77
SLC1A4-201ENST00000234256 Q75L30 129 aa10.24□□□□□ -0.77
SLC1A4-201ENST00000234256 LINC01558Q9Y6Z2 57 aa10.24□□□□□ -0.77
SLC1A4-201ENST00000234256 CRIPTQ9P021 101 aa10.22□□□□□ -0.77
SLC1A4-201ENST00000234256 SPINK7P58062 85 aa10.22□□□□□ -0.77
SLC1A4-201ENST00000234256 PDZD2O15018 2839 aa10.21□□□□□ -0.77
SLC1A4-201ENST00000234256 FBN1P35555 2871 aaKnown RBP10.21□□□□□ -0.77
SLC1A4-201ENST00000234256 KRTAP10-1P60331 282 aa10.21□□□□□ -0.78
SLC1A4-201ENST00000234256 KRTAP7-1Q8IUC3 87 aa10.2□□□□□ -0.78
SLC1A4-201ENST00000234256 A0A1B0GU33 70 aa10.18□□□□□ -0.78
SLC1A4-201ENST00000234256 ZCCHC13Q8WW36 166 aaKnown RBP10.18□□□□□ -0.78
SLC1A4-201ENST00000234256 KRTAP29-1A8MX34 341 aaPredicted RBP10.17□□□□□ -0.78
SLC1A4-201ENST00000234256 PRAC1Q96KF2 57 aa10.17□□□□□ -0.78
SLC1A4-201ENST00000234256 A0A087X002 238 aa10.17□□□□□ -0.78
SLC1A4-201ENST00000234256 NOTCH2NLQ7Z3S9 236 aa10.17□□□□□ -0.78
SLC1A4-201ENST00000234256 VWFP04275 2813 aa10.15□□□□□ -0.78
SLC1A4-201ENST00000234256 RBM12B-AS1Q9P1G2 102 aa10.14□□□□□ -0.79
SLC1A4-201ENST00000234256 ZFHX3Q15911 3703 aa10.12□□□□□ -0.79
SLC1A4-201ENST00000234256 CSMD2Q7Z408 3487 aa10.1□□□□□ -0.79
SLC1A4-201ENST00000234256 Q6ZSA8 131 aa10.07□□□□□ -0.8
SLC1A4-201ENST00000234256 LINC00483Q53H64 154 aa10.06□□□□□ -0.8
SLC1A4-201ENST00000234256 Q6ZR54 194 aa10.05□□□□□ -0.8
SLC1A4-201ENST00000234256 SRRM2Q9UQ35 2752 aaKnown RBP10.03□□□□□ -0.8
SLC1A4-201ENST00000234256 TGP01266 2768 aa10.02□□□□□ -0.8
SLC1A4-201ENST00000234256 Q6ZRN7 208 aaPredicted RBP9.99□□□□□ -0.81
SLC1A4-201ENST00000234256 TENM2Q9NT68 2774 aa9.99□□□□□ -0.81
SLC1A4-201ENST00000234256 OTOGQ6ZRI0 2925 aa9.97□□□□□ -0.81
SLC1A4-201ENST00000234256 DMAC1Q96GE9 116 aa9.96□□□□□ -0.81
SLC1A4-201ENST00000234256 SPENQ96T58 3664 aaKnown RBP9.94□□□□□ -0.82
SLC1A4-201ENST00000234256 CSAG1Q6PB30 78 aa9.92□□□□□ -0.82
SLC1A4-201ENST00000234256 NBPF19A0A087WUL8 3843 aa9.92□□□□□ -0.82
SLC1A4-201ENST00000234256 A8MU10 97 aa9.86□□□□□ -0.83
SLC1A4-201ENST00000234256 Q5VSD8 79 aa9.84□□□□□ -0.83
SLC1A4-201ENST00000234256 LCE6AA0A183 80 aa9.84□□□□□ -0.83
SLC1A4-201ENST00000234256 CAMK2N1Q7Z7J9 78 aa9.83□□□□□ -0.84
SLC1A4-201ENST00000234256 KRTAP13-1Q8IUC0 172 aa9.83□□□□□ -0.84
SLC1A4-201ENST00000234256 S4R3F8 94 aa9.83□□□□□ -0.84
SLC1A4-201ENST00000234256 KRTAP13-2Q52LG2 175 aa9.79□□□□□ -0.84
SLC1A4-201ENST00000234256 SPATA8Q6RVD6 105 aa9.79□□□□□ -0.84
SLC1A4-201ENST00000234256 R4GN34 69 aa9.72□□□□□ -0.85
SLC1A4-201ENST00000234256 RPL37P61927 97 aaKnown RBP9.7□□□□□ -0.86
SLC1A4-201ENST00000234256 H1FX-AS1Q4G0G2 97 aa9.69□□□□□ -0.86
SLC1A4-201ENST00000234256 M0R2T5 61 aa9.68□□□□□ -0.86
SLC1A4-201ENST00000234256 ASB16-AS1Q495Z4 193 aa9.66□□□□□ -0.86
SLC1A4-201ENST00000234256 LUZP6Q538Z0 58 aa9.61□□□□□ -0.87
SLC1A4-201ENST00000234256 ADM2Q7Z4H4 148 aa9.6□□□□□ -0.87
SLC1A4-201ENST00000234256 M0QZ58 72 aa9.57□□□□□ -0.88
SLC1A4-201ENST00000234256 SEC61BP60468 96 aaKnown RBP9.56□□□□□ -0.88
SLC1A4-201ENST00000234256 ROMO1P60602 79 aa9.55□□□□□ -0.88
SLC1A4-201ENST00000234256 A6NN06 94 aa9.55□□□□□ -0.88
SLC1A4-201ENST00000234256 H3BS24 57 aa9.53□□□□□ -0.88
SLC1A4-201ENST00000234256 FBN3Q75N90 2809 aa9.53□□□□□ -0.88
SLC1A4-201ENST00000234256 BSNQ9UPA5 3926 aa9.44□□□□□ -0.9
SLC1A4-201ENST00000234256 RPS29P62273 56 aaKnown RBP9.42□□□□□ -0.9
SLC1A4-201ENST00000234256 COL7A1Q02388 2944 aa9.41□□□□□ -0.9
SLC1A4-201ENST00000234256 KRTAP21-3Q3LHN1 58 aa9.37□□□□□ -0.91
SLC1A4-201ENST00000234256 KRTAP1-4P0C5Y4 121 aa9.37□□□□□ -0.91
SLC1A4-201ENST00000234256 TRRAPQ9Y4A5 3859 aa9.33□□□□□ -0.92
SLC1A4-201ENST00000234256 VPS13CQ709C8 3753 aa9.31□□□□□ -0.92
SLC1A4-201ENST00000234256 A8MUU9 505 aa9.29□□□□□ -0.92
SLC1A4-201ENST00000234256 KRTAP25-1Q3LHN0 102 aa9.27□□□□□ -0.93
SLC1A4-201ENST00000234256 MEGF8Q7Z7M0 2845 aa9.26□□□□□ -0.93
SLC1A4-201ENST00000234256 C20orf166-AS1Q96NR2 134 aa9.25□□□□□ -0.93
SLC1A4-201ENST00000234256 KRTAP16-1A8MUX0 517 aa9.12□□□□□ -0.95
SLC1A4-201ENST00000234256 A0A0A0MQY5 61 aa9.06□□□□□ -0.96
SLC1A4-201ENST00000234256 XP32Q5T750 250 aa9.06□□□□□ -0.96
SLC1A4-201ENST00000234256 H0YAA0 97 aa9.05□□□□□ -0.96
SLC1A4-201ENST00000234256 PLAC4Q8WY50 150 aa9.05□□□□□ -0.96
SLC1A4-201ENST00000234256 C10orf95Q9H7T3 257 aa9.02□□□□□ -0.97
SLC1A4-201ENST00000234256 NDUFAF8A1L188 74 aa9.01□□□□□ -0.97
SLC1A4-201ENST00000234256 ZNF469Q96JG9 3925 aaPredicted RBP9.01□□□□□ -0.97
SLC1A4-201ENST00000234256 ANK3Q12955 4377 aaKnown RBP8.98□□□□□ -0.97
SLC1A4-201ENST00000234256 KRTAP13-3Q3SY46 172 aa8.95□□□□□ -0.98
SLC1A4-201ENST00000234256 P0C880 135 aa8.89□□□□□ -0.99
SLC1A4-201ENST00000234256 A0A1B0GVY2 172 aa8.82□□□□□ -1
SLC1A4-201ENST00000234256 CSMD3Q7Z407 3707 aa8.78□□□□□ -1
SLC1A4-201ENST00000234256 TNP1P09430 55 aa8.76□□□□□ -1.01
SLC1A4-201ENST00000234256 TPRXLQ17RH7 258 aa8.71□□□□□ -1.02
SLC1A4-201ENST00000234256 KRTAP10-8P60410 259 aa8.69□□□□□ -1.02
SLC1A4-201ENST00000234256 KRTAP3-1Q9BYR8 98 aa8.59□□□□□ -1.03
SLC1A4-201ENST00000234256 KRTAP12-2P59991 146 aa8.47□□□□□ -1.05
SLC1A4-201ENST00000234256 PP632Q6XCG6 107 aa8.46□□□□□ -1.06
SLC1A4-201ENST00000234256 KRTAP10-10P60014 251 aa8.45□□□□□ -1.06
SLC1A4-201ENST00000234256 AKAP9Q99996 3911 aa8.38□□□□□ -1.07
SLC1A4-201ENST00000234256 KRTAP12-1P59990 96 aa8.34□□□□□ -1.07
SLC1A4-201ENST00000234256 KRTAP13-4Q3LI77 160 aa8.33□□□□□ -1.08
SLC1A4-201ENST00000234256 KRTAP10-6P60371 365 aaPredicted RBP8.29□□□□□ -1.08
SLC1A4-201ENST00000234256 HUWE1Q7Z6Z7 4374 aaKnown RBP8.25□□□□□ -1.09
SLC1A4-201ENST00000234256 DNHD1Q96M86 4753 aa8.23□□□□□ -1.09
SLC1A4-201ENST00000234256 MT1HL1P0DM35 61 aa8.1□□□□□ -1.11
SLC1A4-201ENST00000234256 KRTAP3-3Q9BYR6 98 aa8.04□□□□□ -1.12
SLC1A4-201ENST00000234256 DNAH9Q9NYC9 4486 aa8.03□□□□□ -1.12
SLC1A4-201ENST00000234256 KRTAP3-2Q9BYR7 98 aa8.03□□□□□ -1.12
SLC1A4-201ENST00000234256 KRTAP10-4P60372 401 aaPredicted RBP8.02□□□□□ -1.13
SLC1A4-201ENST00000234256 PRO2289Q9P1D8 64 aa8□□□□□ -1.13
SLC1A4-201ENST00000234256 KRTAP4-5Q9BYR2 181 aa7.94□□□□□ -1.14
SLC1A4-201ENST00000234256 DNAH11Q96DT5 4516 aa7.88□□□□□ -1.15
SLC1A4-201ENST00000234256 DNAH5Q8TE73 4624 aa7.86□□□□□ -1.15
SLC1A4-201ENST00000234256 PLECQ15149 4684 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms