RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 UBR5O95071 2799 aaPredicted RBP7.26□□□□□ -1.25
NEK4-201ENST00000233027 DMXL2Q8TDJ6 3036 aa7.23□□□□□ -1.25
NEK4-201ENST00000233027 ITPR2Q14571 2701 aa7.23□□□□□ -1.25
NEK4-201ENST00000233027 C10orf95Q9H7T3 257 aa7.22□□□□□ -1.25
NEK4-201ENST00000233027 BAHCC1Q9P281 2608 aa7.22□□□□□ -1.25
NEK4-201ENST00000233027 SPEGQ15772 3267 aa7.22□□□□□ -1.25
NEK4-201ENST00000233027 APCP25054 2843 aa7.21□□□□□ -1.26
NEK4-201ENST00000233027 ASH1LQ9NR48 2969 aaKnown RBP7.2□□□□□ -1.26
NEK4-201ENST00000233027 TACC2O95359 2948 aa7.2□□□□□ -1.26
NEK4-201ENST00000233027 TNP1P09430 55 aa7.18□□□□□ -1.26
NEK4-201ENST00000233027 ITPR1Q14643 2758 aa7.18□□□□□ -1.26
NEK4-201ENST00000233027 COL12A1Q99715 3063 aa7.17□□□□□ -1.26
NEK4-201ENST00000233027 STAB2Q8WWQ8 2551 aa7.17□□□□□ -1.26
NEK4-201ENST00000233027 USP34Q70CQ2 3546 aa7.17□□□□□ -1.26
NEK4-201ENST00000233027 NSD1Q96L73 2696 aaPredicted RBP7.16□□□□□ -1.26
NEK4-201ENST00000233027 UTP20O75691 2785 aaKnown RBP7.15□□□□□ -1.27
NEK4-201ENST00000233027 ZZEF1O43149 2961 aa7.14□□□□□ -1.27
NEK4-201ENST00000233027 H0YAA0 97 aa7.13□□□□□ -1.27
NEK4-201ENST00000233027 KRTAP1-4P0C5Y4 121 aa7.13□□□□□ -1.27
NEK4-201ENST00000233027 HIVEP1P15822 2718 aa7.12□□□□□ -1.27
NEK4-201ENST00000233027 XP32Q5T750 250 aa7.09□□□□□ -1.28
NEK4-201ENST00000233027 A0A1B0GVY2 172 aa7.07□□□□□ -1.28
NEK4-201ENST00000233027 KMT2BQ9UMN6 2715 aaPredicted RBP7.06□□□□□ -1.28
NEK4-201ENST00000233027 CRYBG3Q68DQ2 2970 aa7.06□□□□□ -1.28
NEK4-201ENST00000233027 MYO15AQ9UKN7 3530 aa7.03□□□□□ -1.28
NEK4-201ENST00000233027 EYSQ5T1H1 3165 aa7.02□□□□□ -1.28
NEK4-201ENST00000233027 KRTAP10-8P60410 259 aa7□□□□□ -1.29
NEK4-201ENST00000233027 FLNCQ14315 2725 aa6.97□□□□□ -1.29
NEK4-201ENST00000233027 PP632Q6XCG6 107 aa6.94□□□□□ -1.3
NEK4-201ENST00000233027 CELSR2Q9HCU4 2923 aa6.93□□□□□ -1.3
NEK4-201ENST00000233027 P0C880 135 aa6.93□□□□□ -1.3
NEK4-201ENST00000233027 TNRC18O15417 2968 aaPredicted RBP6.92□□□□□ -1.3
NEK4-201ENST00000233027 LOC400499M0QZD8 3231 aa6.9□□□□□ -1.3
NEK4-201ENST00000233027 HRNRQ86YZ3 2850 aaPredicted RBP6.88□□□□□ -1.31
NEK4-201ENST00000233027 DMXL1Q9Y485 3027 aa6.86□□□□□ -1.31
NEK4-201ENST00000233027 WDFY3Q8IZQ1 3526 aa6.85□□□□□ -1.31
NEK4-201ENST00000233027 DCHS2Q6V1P9 2916 aa6.84□□□□□ -1.31
NEK4-201ENST00000233027 TPRXLQ17RH7 258 aa6.82□□□□□ -1.32
NEK4-201ENST00000233027 DCHS1Q96JQ0 3298 aa6.82□□□□□ -1.32
NEK4-201ENST00000233027 ASPMQ8IZT6 3477 aa6.81□□□□□ -1.32
NEK4-201ENST00000233027 KRTAP21-3Q3LHN1 58 aa6.8□□□□□ -1.32
NEK4-201ENST00000233027 KRTAP13-3Q3SY46 172 aa6.8□□□□□ -1.32
NEK4-201ENST00000233027 ZANQ9Y493 2812 aa6.8□□□□□ -1.32
NEK4-201ENST00000233027 NIPBLQ6KC79 2804 aaeCLIP6.78□□□□□ -1.32
NEK4-201ENST00000233027 KRTAP10-10P60014 251 aa6.77□□□□□ -1.32
NEK4-201ENST00000233027 FBN2P35556 2912 aa6.75□□□□□ -1.33
NEK4-201ENST00000233027 ZFHX4Q86UP3 3567 aa6.74□□□□□ -1.33
NEK4-201ENST00000233027 KRTAP12-2P59991 146 aa6.72□□□□□ -1.33
NEK4-201ENST00000233027 TENM4Q6N022 2769 aa6.71□□□□□ -1.34
NEK4-201ENST00000233027 RELNP78509 3460 aa6.7□□□□□ -1.34
NEK4-201ENST00000233027 CSMD1Q96PZ7 3565 aa6.7□□□□□ -1.34
NEK4-201ENST00000233027 CELSR1Q9NYQ6 3014 aa6.66□□□□□ -1.34
NEK4-201ENST00000233027 NF1P21359 2839 aa6.62□□□□□ -1.35
NEK4-201ENST00000233027 TGP01266 2768 aa6.61□□□□□ -1.35
NEK4-201ENST00000233027 PRO2289Q9P1D8 64 aa6.6□□□□□ -1.35
NEK4-201ENST00000233027 LAMA5O15230 3695 aa6.54□□□□□ -1.36
NEK4-201ENST00000233027 KRTAP12-1P59990 96 aa6.54□□□□□ -1.36
NEK4-201ENST00000233027 TENM2Q9NT68 2774 aa6.53□□□□□ -1.36
NEK4-201ENST00000233027 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
NEK4-201ENST00000233027 TENM1Q9UKZ4 2725 aa6.52□□□□□ -1.37
NEK4-201ENST00000233027 NBPF19A0A087WUL8 3843 aa6.51□□□□□ -1.37
NEK4-201ENST00000233027 SMG1Q96Q15 3661 aaKnown RBP6.5□□□□□ -1.37
NEK4-201ENST00000233027 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
NEK4-201ENST00000233027 MXRA5Q9NR99 2828 aa6.46□□□□□ -1.37
NEK4-201ENST00000233027 TENM3Q9P273 2699 aa6.43□□□□□ -1.38
NEK4-201ENST00000233027 DMDP11532 3685 aa6.4□□□□□ -1.38
NEK4-201ENST00000233027 SVEP1Q4LDE5 3571 aa6.37□□□□□ -1.39
NEK4-201ENST00000233027 ANK3Q12955 4377 aaKnown RBP6.32□□□□□ -1.4
NEK4-201ENST00000233027 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
NEK4-201ENST00000233027 PKD1L1Q8TDX9 2849 aa6.25□□□□□ -1.41
NEK4-201ENST00000233027 KRTAP15-1Q3LI76 137 aa6.25□□□□□ -1.41
NEK4-201ENST00000233027 PDZD2O15018 2839 aa6.24□□□□□ -1.41
NEK4-201ENST00000233027 VWFP04275 2813 aa6.24□□□□□ -1.41
NEK4-201ENST00000233027 SPENQ96T58 3664 aaKnown RBP6.22□□□□□ -1.41
NEK4-201ENST00000233027 CUBNO60494 3623 aa6.19□□□□□ -1.42
NEK4-201ENST00000233027 CSMD2Q7Z408 3487 aa6.13□□□□□ -1.43
NEK4-201ENST00000233027 ZFHX3Q15911 3703 aa6.1□□□□□ -1.43
NEK4-201ENST00000233027 KRTAP3-3Q9BYR6 98 aa6.09□□□□□ -1.43
NEK4-201ENST00000233027 KRTAP3-2Q9BYR7 98 aa6.09□□□□□ -1.43
NEK4-201ENST00000233027 FBN1P35555 2871 aaKnown RBP6.06□□□□□ -1.44
NEK4-201ENST00000233027 HUWE1Q7Z6Z7 4374 aaKnown RBP6.06□□□□□ -1.44
NEK4-201ENST00000233027 TRRAPQ9Y4A5 3859 aa6.05□□□□□ -1.44
NEK4-201ENST00000233027 BSNQ9UPA5 3926 aa6.04□□□□□ -1.44
NEK4-201ENST00000233027 FBN3Q75N90 2809 aa6.03□□□□□ -1.44
NEK4-201ENST00000233027 MUC3AQ02505 3323 aa6.02□□□□□ -1.45
NEK4-201ENST00000233027 MT1HL1P0DM35 61 aa6.01□□□□□ -1.45
NEK4-201ENST00000233027 OTOGQ6ZRI0 2925 aa6.01□□□□□ -1.45
NEK4-201ENST00000233027 MEGF8Q7Z7M0 2845 aa6□□□□□ -1.45
NEK4-201ENST00000233027 VPS13CQ709C8 3753 aa5.95□□□□□ -1.46
NEK4-201ENST00000233027 CRCT1Q9UGL9 99 aa5.94□□□□□ -1.46
NEK4-201ENST00000233027 KRTAP10-12P60413 245 aa5.92□□□□□ -1.46
NEK4-201ENST00000233027 INE1O15225 51 aa5.88□□□□□ -1.47
NEK4-201ENST00000233027 KRTAP10-4P60372 401 aaPredicted RBP5.86□□□□□ -1.47
NEK4-201ENST00000233027 KRTAP4-5Q9BYR2 181 aa5.86□□□□□ -1.47
NEK4-201ENST00000233027 SRRM2Q9UQ35 2752 aaKnown RBP5.85□□□□□ -1.47
NEK4-201ENST00000233027 LORP23490 312 aaPredicted RBP5.81□□□□□ -1.48
NEK4-201ENST00000233027 COL7A1Q02388 2944 aa5.8□□□□□ -1.48
NEK4-201ENST00000233027 LCE3AQ5TA76 89 aa5.8□□□□□ -1.48
NEK4-201ENST00000233027 ALMS1Q8TCU4 4167 aa5.79□□□□□ -1.48
NEK4-201ENST00000233027 CSMD3Q7Z407 3707 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms