RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 A0A087X002 238 aa5.88□□□□□ -1.47
TRIM23-201ENST00000231524 NOTCH2NLQ7Z3S9 236 aa5.88□□□□□ -1.47
TRIM23-201ENST00000231524 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.88□□□□□ -1.47
TRIM23-201ENST00000231524 FBN1P35555 2871 aaKnown RBP5.88□□□□□ -1.47
TRIM23-201ENST00000231524 APLNQ9ULZ1 77 aa5.86□□□□□ -1.47
TRIM23-201ENST00000231524 Q5W150 140 aa5.85□□□□□ -1.47
TRIM23-201ENST00000231524 Q96NJ1 140 aa5.85□□□□□ -1.47
TRIM23-201ENST00000231524 TENM3Q9P273 2699 aa5.85□□□□□ -1.47
TRIM23-201ENST00000231524 Q8N1X5 172 aa5.85□□□□□ -1.47
TRIM23-201ENST00000231524 SSBP3-AS1Q7Z2R9 100 aa5.85□□□□□ -1.47
TRIM23-201ENST00000231524 WWC2-AS2Q96NR7 200 aa5.84□□□□□ -1.47
TRIM23-201ENST00000231524 DMBT1Q9UGM3 2413 aaPredicted RBP5.84□□□□□ -1.48
TRIM23-201ENST00000231524 PANO1I0J062 215 aa5.82□□□□□ -1.48
TRIM23-201ENST00000231524 FLG2Q5D862 2391 aaPredicted RBP5.82□□□□□ -1.48
TRIM23-201ENST00000231524 VPS13CQ709C8 3753 aa5.82□□□□□ -1.48
TRIM23-201ENST00000231524 PLA2G1BP04054 148 aaKnown RBP5.81□□□□□ -1.48
TRIM23-201ENST00000231524 A0A087WTM6 91 aa5.81□□□□□ -1.48
TRIM23-201ENST00000231524 PKD1L1Q8TDX9 2849 aa5.81□□□□□ -1.48
TRIM23-201ENST00000231524 DMAC1Q96GE9 116 aa5.81□□□□□ -1.48
TRIM23-201ENST00000231524 IGLV7-43P04211 117 aa5.8□□□□□ -1.48
TRIM23-201ENST00000231524 SPATA8Q6RVD6 105 aa5.79□□□□□ -1.48
TRIM23-201ENST00000231524 SPINT4Q6UDR6 99 aa5.78□□□□□ -1.48
TRIM23-201ENST00000231524 CRIPTQ9P021 101 aa5.75□□□□□ -1.49
TRIM23-201ENST00000231524 TYMSOSQ8TAI1 123 aa5.74□□□□□ -1.49
TRIM23-201ENST00000231524 ASB16-AS1Q495Z4 193 aa5.74□□□□□ -1.49
TRIM23-201ENST00000231524 LINC00483Q53H64 154 aa5.73□□□□□ -1.49
TRIM23-201ENST00000231524 SRRM2Q9UQ35 2752 aaKnown RBP5.73□□□□□ -1.49
TRIM23-201ENST00000231524 PLAC8Q9NZF1 115 aa5.73□□□□□ -1.49
TRIM23-201ENST00000231524 A0A1B0GU33 70 aa5.71□□□□□ -1.49
TRIM23-201ENST00000231524 ZNF469Q96JG9 3925 aaPredicted RBP5.69□□□□□ -1.5
TRIM23-201ENST00000231524 KRTAP13-1Q8IUC0 172 aa5.69□□□□□ -1.5
TRIM23-201ENST00000231524 C9orf92A6NGG3 77 aa5.67□□□□□ -1.5
TRIM23-201ENST00000231524 ANK3Q12955 4377 aaKnown RBP5.67□□□□□ -1.5
TRIM23-201ENST00000231524 TRRAPQ9Y4A5 3859 aa5.67□□□□□ -1.5
TRIM23-201ENST00000231524 A0A0D9SG42 100 aa5.65□□□□□ -1.51
TRIM23-201ENST00000231524 SMR3BP02814 79 aaPredicted RBP5.65□□□□□ -1.51
TRIM23-201ENST00000231524 TENM2Q9NT68 2774 aa5.6□□□□□ -1.51
TRIM23-201ENST00000231524 LINC00304Q8N9R0 145 aa5.59□□□□□ -1.51
TRIM23-201ENST00000231524 TGP01266 2768 aa5.59□□□□□ -1.52
TRIM23-201ENST00000231524 KRTAP25-1Q3LHN0 102 aa5.58□□□□□ -1.52
TRIM23-201ENST00000231524 Q6ZRN7 208 aaPredicted RBP5.55□□□□□ -1.52
TRIM23-201ENST00000231524 H1FX-AS1Q4G0G2 97 aa5.54□□□□□ -1.52
TRIM23-201ENST00000231524 KRTAP10-2P60368 255 aa5.54□□□□□ -1.52
TRIM23-201ENST00000231524 ROMO1P60602 79 aa5.54□□□□□ -1.52
TRIM23-201ENST00000231524 KRTAP13-3Q3SY46 172 aa5.49□□□□□ -1.53
TRIM23-201ENST00000231524 Q6ZSA8 131 aa5.48□□□□□ -1.53
TRIM23-201ENST00000231524 KRTAP10-1P60331 282 aa5.48□□□□□ -1.53
TRIM23-201ENST00000231524 KRTAP13-2Q52LG2 175 aa5.47□□□□□ -1.53
TRIM23-201ENST00000231524 COL7A1Q02388 2944 aa5.47□□□□□ -1.53
TRIM23-201ENST00000231524 A8MUU9 505 aa5.47□□□□□ -1.53
TRIM23-201ENST00000231524 RPL37P61927 97 aaKnown RBP5.46□□□□□ -1.54
TRIM23-201ENST00000231524 AKAP9Q99996 3911 aa5.45□□□□□ -1.54
TRIM23-201ENST00000231524 H0YAA0 97 aa5.44□□□□□ -1.54
TRIM23-201ENST00000231524 CSMD3Q7Z407 3707 aa5.38□□□□□ -1.55
TRIM23-201ENST00000231524 NDUFAF8A1L188 74 aa5.38□□□□□ -1.55
TRIM23-201ENST00000231524 COX6B2Q6YFQ2 88 aa5.38□□□□□ -1.55
TRIM23-201ENST00000231524 KRTAP21-3Q3LHN1 58 aa5.37□□□□□ -1.55
TRIM23-201ENST00000231524 KRTAP16-1A8MUX0 517 aa5.37□□□□□ -1.55
TRIM23-201ENST00000231524 FBN3Q75N90 2809 aa5.36□□□□□ -1.55
TRIM23-201ENST00000231524 S4R3F8 94 aa5.29□□□□□ -1.56
TRIM23-201ENST00000231524 C10orf95Q9H7T3 257 aa5.29□□□□□ -1.56
TRIM23-201ENST00000231524 J3QL48 77 aa5.27□□□□□ -1.57
TRIM23-201ENST00000231524 KRTAP1-4P0C5Y4 121 aa5.26□□□□□ -1.57
TRIM23-201ENST00000231524 Q5VSD8 79 aa5.24□□□□□ -1.57
TRIM23-201ENST00000231524 MEGF8Q7Z7M0 2845 aa5.23□□□□□ -1.57
TRIM23-201ENST00000231524 C20orf166-AS1Q96NR2 134 aa5.23□□□□□ -1.57
TRIM23-201ENST00000231524 LUZP6Q538Z0 58 aa5.22□□□□□ -1.57
TRIM23-201ENST00000231524 A0A0A0MQY5 61 aa5.2□□□□□ -1.58
TRIM23-201ENST00000231524 RPS29P62273 56 aaKnown RBP5.18□□□□□ -1.58
TRIM23-201ENST00000231524 P0C880 135 aa5.16□□□□□ -1.58
TRIM23-201ENST00000231524 HUWE1Q7Z6Z7 4374 aaKnown RBP5.16□□□□□ -1.58
TRIM23-201ENST00000231524 KRTAP3-1Q9BYR8 98 aa5.13□□□□□ -1.59
TRIM23-201ENST00000231524 R4GN34 69 aa5.12□□□□□ -1.59
TRIM23-201ENST00000231524 TPRXLQ17RH7 258 aa5.11□□□□□ -1.59
TRIM23-201ENST00000231524 M0QZ58 72 aa5.11□□□□□ -1.59
TRIM23-201ENST00000231524 DNAH10Q8IVF4 4471 aa5.08□□□□□ -1.6
TRIM23-201ENST00000231524 CAMK2N1Q7Z7J9 78 aa5.08□□□□□ -1.6
TRIM23-201ENST00000231524 DNAH9Q9NYC9 4486 aa5.04□□□□□ -1.6
TRIM23-201ENST00000231524 DNHD1Q96M86 4753 aa5.04□□□□□ -1.6
TRIM23-201ENST00000231524 KRTAP13-4Q3LI77 160 aa5.01□□□□□ -1.61
TRIM23-201ENST00000231524 KRTAP12-2P59991 146 aa4.99□□□□□ -1.61
TRIM23-201ENST00000231524 A0A1B0GVY2 172 aa4.98□□□□□ -1.61
TRIM23-201ENST00000231524 KRTAP10-6P60371 365 aaPredicted RBP4.97□□□□□ -1.61
TRIM23-201ENST00000231524 PLAC4Q8WY50 150 aa4.96□□□□□ -1.62
TRIM23-201ENST00000231524 PLECQ15149 4684 aaKnown RBP4.95□□□□□ -1.62
TRIM23-201ENST00000231524 PRKDCP78527 4128 aaKnown RBP4.92□□□□□ -1.62
TRIM23-201ENST00000231524 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
TRIM23-201ENST00000231524 ANK2Q01484 3957 aa4.91□□□□□ -1.62
TRIM23-201ENST00000231524 XP32Q5T750 250 aa4.9□□□□□ -1.62
TRIM23-201ENST00000231524 KRTAP12-1P59990 96 aa4.9□□□□□ -1.63
TRIM23-201ENST00000231524 KRTAP10-8P60410 259 aa4.89□□□□□ -1.63
TRIM23-201ENST00000231524 STARD9Q9P2P6 4700 aa4.87□□□□□ -1.63
TRIM23-201ENST00000231524 ALMS1Q8TCU4 4167 aa4.87□□□□□ -1.63
TRIM23-201ENST00000231524 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
TRIM23-201ENST00000231524 KRTAP3-2Q9BYR7 98 aa4.85□□□□□ -1.63
TRIM23-201ENST00000231524 SEC61BP60468 96 aaKnown RBP4.84□□□□□ -1.63
TRIM23-201ENST00000231524 DNAH1Q9P2D7 4330 aa4.84□□□□□ -1.64
TRIM23-201ENST00000231524 KRTAP3-3Q9BYR6 98 aa4.83□□□□□ -1.64
TRIM23-201ENST00000231524 LYSTQ99698 3801 aa4.8□□□□□ -1.64
TRIM23-201ENST00000231524 CMYA5Q8N3K9 4069 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms