RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 PRO0628Q9UI54 55 aa9.29□□□□□ -0.92
TMEM30A-201ENST00000230461 A8MUN3 132 aa9.29□□□□□ -0.92
TMEM30A-201ENST00000230461 TENM2Q9NT68 2774 aa9.29□□□□□ -0.92
TMEM30A-201ENST00000230461 PKD1L1Q8TDX9 2849 aa9.28□□□□□ -0.92
TMEM30A-201ENST00000230461 FLG2Q5D862 2391 aaPredicted RBP9.27□□□□□ -0.93
TMEM30A-201ENST00000230461 ZCCHC13Q8WW36 166 aaKnown RBP9.26□□□□□ -0.93
TMEM30A-201ENST00000230461 RBM12B-AS1Q9P1G2 102 aa9.26□□□□□ -0.93
TMEM30A-201ENST00000230461 HRES1P13985 223 aa9.23□□□□□ -0.93
TMEM30A-201ENST00000230461 Q6ZSA8 131 aa9.23□□□□□ -0.93
TMEM30A-201ENST00000230461 Q8N9P0 234 aaPredicted RBP9.22□□□□□ -0.93
TMEM30A-201ENST00000230461 CYP4F30PQ9H0H9 118 aa9.21□□□□□ -0.93
TMEM30A-201ENST00000230461 Q5W150 140 aa9.19□□□□□ -0.94
TMEM30A-201ENST00000230461 CYSTM1Q9H1C7 97 aa9.18□□□□□ -0.94
TMEM30A-201ENST00000230461 KRTAP29-1A8MX34 341 aaPredicted RBP9.17□□□□□ -0.94
TMEM30A-201ENST00000230461 TGP01266 2768 aa9.16□□□□□ -0.94
TMEM30A-201ENST00000230461 UQCR11O14957 56 aa9.16□□□□□ -0.94
TMEM30A-201ENST00000230461 KRTAP13-2Q52LG2 175 aa9.15□□□□□ -0.94
TMEM30A-201ENST00000230461 ASB16-AS1Q495Z4 193 aa9.14□□□□□ -0.95
TMEM30A-201ENST00000230461 SPINK7P58062 85 aa9.12□□□□□ -0.95
TMEM30A-201ENST00000230461 FP248Q71RG6 208 aaPredicted RBP9.11□□□□□ -0.95
TMEM30A-201ENST00000230461 ANK3Q12955 4377 aaKnown RBP9.1□□□□□ -0.95
TMEM30A-201ENST00000230461 NOTCH2NLQ7Z3S9 236 aa9.09□□□□□ -0.95
TMEM30A-201ENST00000230461 RPS29P62273 56 aaKnown RBP9.08□□□□□ -0.96
TMEM30A-201ENST00000230461 Q5XG85 94 aa9.05□□□□□ -0.96
TMEM30A-201ENST00000230461 MIR22HGQ0VDD5 57 aa9.03□□□□□ -0.96
TMEM30A-201ENST00000230461 SEC61BP60468 96 aaKnown RBP9.01□□□□□ -0.97
TMEM30A-201ENST00000230461 Q1T7F1 81 aa8.99□□□□□ -0.97
TMEM30A-201ENST00000230461 OXTP01178 125 aa8.93□□□□□ -0.98
TMEM30A-201ENST00000230461 TRRAPQ9Y4A5 3859 aa8.92□□□□□ -0.98
TMEM30A-201ENST00000230461 KRTAP1-4P0C5Y4 121 aa8.91□□□□□ -0.98
TMEM30A-201ENST00000230461 DMAC1Q96GE9 116 aa8.9□□□□□ -0.99
TMEM30A-201ENST00000230461 LINC01558Q9Y6Z2 57 aa8.89□□□□□ -0.99
TMEM30A-201ENST00000230461 CSAG1Q6PB30 78 aa8.89□□□□□ -0.99
TMEM30A-201ENST00000230461 ZNF469Q96JG9 3925 aaPredicted RBP8.88□□□□□ -0.99
TMEM30A-201ENST00000230461 S4R3F8 94 aa8.86□□□□□ -0.99
TMEM30A-201ENST00000230461 LINC01554Q52M75 96 aa8.85□□□□□ -0.99
TMEM30A-201ENST00000230461 A0A1B0GU33 70 aa8.84□□□□□ -0.99
TMEM30A-201ENST00000230461 A0A0D9SG42 100 aa8.84□□□□□ -0.99
TMEM30A-201ENST00000230461 CDC42SE1Q9NRR8 79 aa8.84□□□□□ -0.99
TMEM30A-201ENST00000230461 AKAP9Q99996 3911 aa8.82□□□□□ -1
TMEM30A-201ENST00000230461 Q75L30 129 aa8.81□□□□□ -1
TMEM30A-201ENST00000230461 M0R2T5 61 aa8.79□□□□□ -1
TMEM30A-201ENST00000230461 SPINT4Q6UDR6 99 aa8.77□□□□□ -1.01
TMEM30A-201ENST00000230461 FBN3Q75N90 2809 aa8.76□□□□□ -1.01
TMEM30A-201ENST00000230461 H3BS24 57 aa8.73□□□□□ -1.01
TMEM30A-201ENST00000230461 A0A1B0GVY2 172 aa8.73□□□□□ -1.01
TMEM30A-201ENST00000230461 RPL37P61927 97 aaKnown RBP8.71□□□□□ -1.01
TMEM30A-201ENST00000230461 Q5VV11 94 aa8.71□□□□□ -1.01
TMEM30A-201ENST00000230461 A8MUU9 505 aa8.69□□□□□ -1.02
TMEM30A-201ENST00000230461 C20orf166-AS1Q96NR2 134 aa8.67□□□□□ -1.02
TMEM30A-201ENST00000230461 CRIPTQ9P021 101 aa8.64□□□□□ -1.03
TMEM30A-201ENST00000230461 R4GN34 69 aa8.6□□□□□ -1.03
TMEM30A-201ENST00000230461 SRRM2Q9UQ35 2752 aaKnown RBP8.6□□□□□ -1.03
TMEM30A-201ENST00000230461 H1FX-AS1Q4G0G2 97 aa8.59□□□□□ -1.03
TMEM30A-201ENST00000230461 MEGF8Q7Z7M0 2845 aa8.56□□□□□ -1.04
TMEM30A-201ENST00000230461 CAMK2N1Q7Z7J9 78 aa8.56□□□□□ -1.04
TMEM30A-201ENST00000230461 KTN1-AS1Q86SY8 53 aa8.56□□□□□ -1.04
TMEM30A-201ENST00000230461 XP32Q5T750 250 aa8.52□□□□□ -1.05
TMEM30A-201ENST00000230461 KRTAP16-1A8MUX0 517 aa8.49□□□□□ -1.05
TMEM30A-201ENST00000230461 KRTAP10-8P60410 259 aa8.49□□□□□ -1.05
TMEM30A-201ENST00000230461 ADM2Q7Z4H4 148 aa8.48□□□□□ -1.05
TMEM30A-201ENST00000230461 COL7A1Q02388 2944 aa8.47□□□□□ -1.05
TMEM30A-201ENST00000230461 LCA10Q71F78 164 aa8.46□□□□□ -1.06
TMEM30A-201ENST00000230461 M0QZ58 72 aa8.46□□□□□ -1.06
TMEM30A-201ENST00000230461 TPRXLQ17RH7 258 aa8.43□□□□□ -1.06
TMEM30A-201ENST00000230461 SPATA8Q6RVD6 105 aa8.4□□□□□ -1.06
TMEM30A-201ENST00000230461 KRTAP13-3Q3SY46 172 aa8.39□□□□□ -1.07
TMEM30A-201ENST00000230461 HUWE1Q7Z6Z7 4374 aaKnown RBP8.35□□□□□ -1.07
TMEM30A-201ENST00000230461 PRAC1Q96KF2 57 aa8.29□□□□□ -1.08
TMEM30A-201ENST00000230461 A8MU10 97 aa8.21□□□□□ -1.1
TMEM30A-201ENST00000230461 ROMO1P60602 79 aa8.2□□□□□ -1.1
TMEM30A-201ENST00000230461 CSMD3Q7Z407 3707 aa8.17□□□□□ -1.1
TMEM30A-201ENST00000230461 PLAC4Q8WY50 150 aa8.16□□□□□ -1.1
TMEM30A-201ENST00000230461 DNAH9Q9NYC9 4486 aa8.15□□□□□ -1.1
TMEM30A-201ENST00000230461 DNHD1Q96M86 4753 aa8.09□□□□□ -1.11
TMEM30A-201ENST00000230461 KRTAP10-4P60372 401 aaPredicted RBP8.05□□□□□ -1.12
TMEM30A-201ENST00000230461 A6NN06 94 aa8.01□□□□□ -1.13
TMEM30A-201ENST00000230461 MT1HL1P0DM35 61 aa8.01□□□□□ -1.13
TMEM30A-201ENST00000230461 ANK2Q01484 3957 aa8□□□□□ -1.13
TMEM30A-201ENST00000230461 PLECQ15149 4684 aaKnown RBP7.92□□□□□ -1.14
TMEM30A-201ENST00000230461 LUZP6Q538Z0 58 aa7.91□□□□□ -1.14
TMEM30A-201ENST00000230461 P0C880 135 aa7.89□□□□□ -1.15
TMEM30A-201ENST00000230461 H0YAA0 97 aa7.89□□□□□ -1.15
TMEM30A-201ENST00000230461 KRTAP4-5Q9BYR2 181 aa7.86□□□□□ -1.15
TMEM30A-201ENST00000230461 DNAH10Q8IVF4 4471 aa7.85□□□□□ -1.15
TMEM30A-201ENST00000230461 ALMS1Q8TCU4 4167 aa7.85□□□□□ -1.15
TMEM30A-201ENST00000230461 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
TMEM30A-201ENST00000230461 DNAH5Q8TE73 4624 aa7.82□□□□□ -1.16
TMEM30A-201ENST00000230461 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
TMEM30A-201ENST00000230461 LYSTQ99698 3801 aa7.79□□□□□ -1.16
TMEM30A-201ENST00000230461 KRTAP25-1Q3LHN0 102 aa7.79□□□□□ -1.16
TMEM30A-201ENST00000230461 DNAH1Q9P2D7 4330 aa7.78□□□□□ -1.16
TMEM30A-201ENST00000230461 A0A0A0MQY5 61 aa7.78□□□□□ -1.16
TMEM30A-201ENST00000230461 VPS13DQ5THJ4 4388 aa7.76□□□□□ -1.17
TMEM30A-201ENST00000230461 TNP1P09430 55 aa7.75□□□□□ -1.17
TMEM30A-201ENST00000230461 DNAH11Q96DT5 4516 aa7.73□□□□□ -1.17
TMEM30A-201ENST00000230461 STARD9Q9P2P6 4700 aa7.71□□□□□ -1.18
TMEM30A-201ENST00000230461 PRKDCP78527 4128 aaKnown RBP7.7□□□□□ -1.18
TMEM30A-201ENST00000230461 DNAH17Q9UFH2 4485 aa7.61□□□□□ -1.19
TMEM30A-201ENST00000230461 CMYA5Q8N3K9 4069 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms