RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 PRO0628Q9UI54 55 aa12.43□□□□□ -0.42
CCDC130-201ENST00000221554 HECTD4Q9Y4D8 3996 aa12.43□□□□□ -0.42
CCDC130-201ENST00000221554 CIRBP-AS1Q8TBR5 109 aa12.43□□□□□ -0.42
CCDC130-201ENST00000221554 IGLV7-46A0A075B6I9 117 aa12.41□□□□□ -0.42
CCDC130-201ENST00000221554 DNAH2Q9P225 4427 aa12.41□□□□□ -0.42
CCDC130-201ENST00000221554 NDUFS5O43920 106 aa12.4□□□□□ -0.42
CCDC130-201ENST00000221554 C8orf87E5RJ46 101 aa12.37□□□□□ -0.43
CCDC130-201ENST00000221554 KRTAP10-2P60368 255 aa12.37□□□□□ -0.43
CCDC130-201ENST00000221554 Q6ZSA8 131 aa12.37□□□□□ -0.43
CCDC130-201ENST00000221554 FRAS1Q86XX4 4008 aa12.35□□□□□ -0.43
CCDC130-201ENST00000221554 C1orf195Q5TG92 126 aa12.33□□□□□ -0.44
CCDC130-201ENST00000221554 SPINK6Q6UWN8 80 aa12.3□□□□□ -0.44
CCDC130-201ENST00000221554 LOC101927531A0A1B0GV80 90 aa12.29□□□□□ -0.44
CCDC130-201ENST00000221554 A0A087X002 238 aa12.28□□□□□ -0.44
CCDC130-201ENST00000221554 NOTCH2NLQ7Z3S9 236 aa12.28□□□□□ -0.44
CCDC130-201ENST00000221554 DNAH8Q96JB1 4490 aa12.27□□□□□ -0.44
CCDC130-201ENST00000221554 BRK1Q8WUW1 75 aa12.27□□□□□ -0.45
CCDC130-201ENST00000221554 PCOTHQ58A44 107 aa12.26□□□□□ -0.45
CCDC130-201ENST00000221554 LIMD2Q9BT23 127 aa12.26□□□□□ -0.45
CCDC130-201ENST00000221554 KRTAP10-1P60331 282 aa12.25□□□□□ -0.45
CCDC130-201ENST00000221554 FAT2Q9NYQ8 4349 aa12.24□□□□□ -0.45
CCDC130-201ENST00000221554 COA5Q86WW8 74 aa12.23□□□□□ -0.45
CCDC130-201ENST00000221554 LINC00313P59037 77 aa12.2□□□□□ -0.46
CCDC130-201ENST00000221554 KRTAP13-2Q52LG2 175 aa12.19□□□□□ -0.46
CCDC130-201ENST00000221554 Q8N9P0 234 aaPredicted RBP12.18□□□□□ -0.46
CCDC130-201ENST00000221554 KRTAP13-3Q3SY46 172 aa12.17□□□□□ -0.46
CCDC130-201ENST00000221554 PSPHP1O15172 72 aa12.15□□□□□ -0.46
CCDC130-201ENST00000221554 PKD1P98161 4303 aa12.15□□□□□ -0.46
CCDC130-201ENST00000221554 FAM229AH3BQW9 127 aa12.13□□□□□ -0.47
CCDC130-201ENST00000221554 DNAH11Q96DT5 4516 aa12.12□□□□□ -0.47
CCDC130-201ENST00000221554 Q5W150 140 aa12.12□□□□□ -0.47
CCDC130-201ENST00000221554 KRTAP1-4P0C5Y4 121 aa12.11□□□□□ -0.47
CCDC130-201ENST00000221554 A8MUN3 132 aa12.1□□□□□ -0.47
CCDC130-201ENST00000221554 PKHD1P08F94 4074 aa12.09□□□□□ -0.47
CCDC130-201ENST00000221554 C4orf48Q5BLP8 95 aa12.09□□□□□ -0.47
CCDC130-201ENST00000221554 Q5VV11 94 aa12.06□□□□□ -0.48
CCDC130-201ENST00000221554 HRES1P13985 223 aa12.05□□□□□ -0.48
CCDC130-201ENST00000221554 SPINK1P00995 79 aa12.04□□□□□ -0.48
CCDC130-201ENST00000221554 PLA2G1BP04054 148 aaKnown RBP12.03□□□□□ -0.48
CCDC130-201ENST00000221554 DNAH5Q8TE73 4624 aa12.03□□□□□ -0.48
CCDC130-201ENST00000221554 TYMSOSQ8TAI1 123 aa12.02□□□□□ -0.49
CCDC130-201ENST00000221554 PRR15LQ9BU68 103 aa12.02□□□□□ -0.49
CCDC130-201ENST00000221554 EPPK1P58107 5090 aaKnown RBP12.01□□□□□ -0.49
CCDC130-201ENST00000221554 LINC01558Q9Y6Z2 57 aa12.01□□□□□ -0.49
CCDC130-201ENST00000221554 ACYP2P14621 99 aa12□□□□□ -0.49
CCDC130-201ENST00000221554 Q75L30 129 aa12□□□□□ -0.49
CCDC130-201ENST00000221554 KRTAP16-1A8MUX0 517 aa11.97□□□□□ -0.49
CCDC130-201ENST00000221554 CHKB-CPT1BH3BT56 60 aa11.97□□□□□ -0.49
CCDC130-201ENST00000221554 RPS29P62273 56 aaKnown RBP11.97□□□□□ -0.49
CCDC130-201ENST00000221554 IGKV2-30P06310 120 aa11.96□□□□□ -0.49
CCDC130-201ENST00000221554 SPAG11AQ6PDA7 123 aa11.95□□□□□ -0.5
CCDC130-201ENST00000221554 A0A1B0GVY2 172 aa11.94□□□□□ -0.5
CCDC130-201ENST00000221554 DMAC1Q96GE9 116 aa11.92□□□□□ -0.5
CCDC130-201ENST00000221554 DYNC1H1Q14204 4646 aaKnown RBP11.87□□□□□ -0.51
CCDC130-201ENST00000221554 LINC00304Q8N9R0 145 aa11.85□□□□□ -0.51
CCDC130-201ENST00000221554 LRP1BQ9NZR2 4599 aa11.84□□□□□ -0.51
CCDC130-201ENST00000221554 A6NED7 52 aa11.82□□□□□ -0.52
CCDC130-201ENST00000221554 RETNLBQ9BQ08 111 aa11.82□□□□□ -0.52
CCDC130-201ENST00000221554 PRR26Q8N8Z3 221 aa11.8□□□□□ -0.52
CCDC130-201ENST00000221554 CDC42SE1Q9NRR8 79 aa11.75□□□□□ -0.53
CCDC130-201ENST00000221554 ATP11AUNQ6ZP68 121 aa11.73□□□□□ -0.53
CCDC130-201ENST00000221554 APOBP04114 4563 aaKnown RBP11.73□□□□□ -0.53
CCDC130-201ENST00000221554 IGKV2D-30A0A075B6S6 120 aa11.72□□□□□ -0.53
CCDC130-201ENST00000221554 VPS13BQ7Z7G8 4022 aa11.71□□□□□ -0.53
CCDC130-201ENST00000221554 KIAA1109Q2LD37 5005 aa11.7□□□□□ -0.54
CCDC130-201ENST00000221554 LCA10Q71F78 164 aa11.69□□□□□ -0.54
CCDC130-201ENST00000221554 BIRC6Q9NR09 4857 aa11.68□□□□□ -0.54
CCDC130-201ENST00000221554 C7orf65Q6ZTY9 151 aa11.67□□□□□ -0.54
CCDC130-201ENST00000221554 SMR3BP02814 79 aaPredicted RBP11.65□□□□□ -0.54
CCDC130-201ENST00000221554 PMAIP1Q13794 54 aa11.64□□□□□ -0.55
CCDC130-201ENST00000221554 HSPG2P98160 4391 aa11.63□□□□□ -0.55
CCDC130-201ENST00000221554 A8MU10 97 aa11.62□□□□□ -0.55
CCDC130-201ENST00000221554 KRTAP10-4P60372 401 aaPredicted RBP11.6□□□□□ -0.55
CCDC130-201ENST00000221554 RYR1P21817 5038 aa11.6□□□□□ -0.55
CCDC130-201ENST00000221554 SPINK7P58062 85 aa11.59□□□□□ -0.55
CCDC130-201ENST00000221554 A0A1B0GU69 56 aa11.58□□□□□ -0.56
CCDC130-201ENST00000221554 SPTSSBQ8NFR3 76 aa11.57□□□□□ -0.56
CCDC130-201ENST00000221554 C20orf166-AS1Q96NR2 134 aa11.56□□□□□ -0.56
CCDC130-201ENST00000221554 A8MUU9 505 aa11.56□□□□□ -0.56
CCDC130-201ENST00000221554 FAT1Q14517 4588 aa11.54□□□□□ -0.56
CCDC130-201ENST00000221554 KRTAP17-1Q9BYP8 105 aa11.49□□□□□ -0.57
CCDC130-201ENST00000221554 A6NN06 94 aa11.44□□□□□ -0.58
CCDC130-201ENST00000221554 C9orf92A6NGG3 77 aa11.43□□□□□ -0.58
CCDC130-201ENST00000221554 HERC2O95714 4834 aa11.42□□□□□ -0.58
CCDC130-201ENST00000221554 UQCR11O14957 56 aa11.4□□□□□ -0.58
CCDC130-201ENST00000221554 KTN1-AS1Q86SY8 53 aa11.4□□□□□ -0.58
CCDC130-201ENST00000221554 SPATA8Q6RVD6 105 aa11.39□□□□□ -0.59
CCDC130-201ENST00000221554 Q8N1X5 172 aa11.37□□□□□ -0.59
CCDC130-201ENST00000221554 SEC61GP60059 68 aa11.36□□□□□ -0.59
CCDC130-201ENST00000221554 PKHD1L1Q86WI1 4243 aa11.33□□□□□ -0.6
CCDC130-201ENST00000221554 MIR22HGQ0VDD5 57 aa11.31□□□□□ -0.6
CCDC130-201ENST00000221554 KRTAP4-5Q9BYR2 181 aa11.3□□□□□ -0.6
CCDC130-201ENST00000221554 FLG2Q5D862 2391 aaPredicted RBP11.26□□□□□ -0.61
CCDC130-201ENST00000221554 Q5VSD8 79 aa11.26□□□□□ -0.61
CCDC130-201ENST00000221554 ABCA13Q86UQ4 5058 aa11.25□□□□□ -0.61
CCDC130-201ENST00000221554 KRTAP10-8P60410 259 aa11.25□□□□□ -0.61
CCDC130-201ENST00000221554 KRTAP3-1Q9BYR8 98 aa11.18□□□□□ -0.62
CCDC130-201ENST00000221554 PCLOQ9Y6V0 5065 aa11.17□□□□□ -0.62
CCDC130-201ENST00000221554 COX6B2Q6YFQ2 88 aa11.16□□□□□ -0.62
CCDC130-201ENST00000221554 MYCBP2O75592 4640 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms