RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 C8orf17Q9NRJ1 99 aa8.71□□□□□ -1.01
CNOT3-201ENST00000221232 H3BS24 57 aa8.71□□□□□ -1.02
CNOT3-201ENST00000221232 DNAH6Q9C0G6 4158 aa8.7□□□□□ -1.02
CNOT3-201ENST00000221232 CYP4F30PQ9H0H9 118 aa8.69□□□□□ -1.02
CNOT3-201ENST00000221232 KRTAP10-2P60368 255 aa8.68□□□□□ -1.02
CNOT3-201ENST00000221232 A0A1B0GVX0 72 aa8.67□□□□□ -1.02
CNOT3-201ENST00000221232 IGLV7-43P04211 117 aa8.67□□□□□ -1.02
CNOT3-201ENST00000221232 H3BPC8 53 aa8.63□□□□□ -1.03
CNOT3-201ENST00000221232 A8MUN3 132 aa8.63□□□□□ -1.03
CNOT3-201ENST00000221232 DNAH11Q96DT5 4516 aa8.62□□□□□ -1.03
CNOT3-201ENST00000221232 Q1T7F1 81 aa8.61□□□□□ -1.03
CNOT3-201ENST00000221232 MRPL34Q9BQ48 92 aaKnown RBP8.61□□□□□ -1.03
CNOT3-201ENST00000221232 SPTSSBQ8NFR3 76 aa8.6□□□□□ -1.03
CNOT3-201ENST00000221232 ASB16-AS1Q495Z4 193 aa8.59□□□□□ -1.03
CNOT3-201ENST00000221232 SPANXA2-OT1Q8N9U9 137 aa8.59□□□□□ -1.03
CNOT3-201ENST00000221232 TP53AIP1Q9HCN2 124 aa8.59□□□□□ -1.04
CNOT3-201ENST00000221232 RETNLBQ9BQ08 111 aa8.58□□□□□ -1.04
CNOT3-201ENST00000221232 ALMS1Q8TCU4 4167 aa8.57□□□□□ -1.04
CNOT3-201ENST00000221232 COA5Q86WW8 74 aa8.56□□□□□ -1.04
CNOT3-201ENST00000221232 DNAH5Q8TE73 4624 aa8.56□□□□□ -1.04
CNOT3-201ENST00000221232 Q5W150 140 aa8.55□□□□□ -1.04
CNOT3-201ENST00000221232 IGLV7-46A0A075B6I9 117 aa8.55□□□□□ -1.04
CNOT3-201ENST00000221232 KRTAP10-1P60331 282 aa8.55□□□□□ -1.04
CNOT3-201ENST00000221232 LRP1BQ9NZR2 4599 aa8.53□□□□□ -1.04
CNOT3-201ENST00000221232 HYDINQ4G0P3 5121 aa8.52□□□□□ -1.04
CNOT3-201ENST00000221232 Q8N9P0 234 aaPredicted RBP8.52□□□□□ -1.05
CNOT3-201ENST00000221232 PRR15LQ9BU68 103 aa8.51□□□□□ -1.05
CNOT3-201ENST00000221232 KRTAP13-2Q52LG2 175 aa8.49□□□□□ -1.05
CNOT3-201ENST00000221232 SPAG11AQ6PDA7 123 aa8.49□□□□□ -1.05
CNOT3-201ENST00000221232 KTN1-AS1Q86SY8 53 aa8.49□□□□□ -1.05
CNOT3-201ENST00000221232 C8orf87E5RJ46 101 aa8.48□□□□□ -1.05
CNOT3-201ENST00000221232 CHKB-CPT1BH3BT56 60 aa8.48□□□□□ -1.05
CNOT3-201ENST00000221232 Q5VV11 94 aa8.48□□□□□ -1.05
CNOT3-201ENST00000221232 SSBP3-AS1Q7Z2R9 100 aa8.47□□□□□ -1.05
CNOT3-201ENST00000221232 HRES1P13985 223 aa8.44□□□□□ -1.06
CNOT3-201ENST00000221232 LINC00313P59037 77 aa8.44□□□□□ -1.06
CNOT3-201ENST00000221232 LCA10Q71F78 164 aa8.44□□□□□ -1.06
CNOT3-201ENST00000221232 LIMD2Q9BT23 127 aa8.41□□□□□ -1.06
CNOT3-201ENST00000221232 PRR26Q8N8Z3 221 aa8.4□□□□□ -1.06
CNOT3-201ENST00000221232 VPS13BQ7Z7G8 4022 aa8.4□□□□□ -1.07
CNOT3-201ENST00000221232 PKD1P98161 4303 aa8.39□□□□□ -1.07
CNOT3-201ENST00000221232 LOC101927531A0A1B0GV80 90 aa8.39□□□□□ -1.07
CNOT3-201ENST00000221232 PLA2G1BP04054 148 aaKnown RBP8.38□□□□□ -1.07
CNOT3-201ENST00000221232 Q6ZSA8 131 aa8.38□□□□□ -1.07
CNOT3-201ENST00000221232 KRTAP13-3Q3SY46 172 aa8.37□□□□□ -1.07
CNOT3-201ENST00000221232 PRAC1Q96KF2 57 aa8.37□□□□□ -1.07
CNOT3-201ENST00000221232 FAT2Q9NYQ8 4349 aa8.37□□□□□ -1.07
CNOT3-201ENST00000221232 A6NED7 52 aa8.36□□□□□ -1.07
CNOT3-201ENST00000221232 KRTAP1-4P0C5Y4 121 aa8.36□□□□□ -1.07
CNOT3-201ENST00000221232 A6NN06 94 aa8.35□□□□□ -1.07
CNOT3-201ENST00000221232 SMR3BP02814 79 aaPredicted RBP8.33□□□□□ -1.08
CNOT3-201ENST00000221232 ADM2Q7Z4H4 148 aa8.32□□□□□ -1.08
CNOT3-201ENST00000221232 TYMSOSQ8TAI1 123 aa8.32□□□□□ -1.08
CNOT3-201ENST00000221232 IGKV2D-30A0A075B6S6 120 aa8.31□□□□□ -1.08
CNOT3-201ENST00000221232 IGKV2-30P06310 120 aa8.31□□□□□ -1.08
CNOT3-201ENST00000221232 PKHD1P08F94 4074 aa8.3□□□□□ -1.08
CNOT3-201ENST00000221232 FAM229AH3BQW9 127 aa8.28□□□□□ -1.08
CNOT3-201ENST00000221232 Q75L30 129 aa8.28□□□□□ -1.08
CNOT3-201ENST00000221232 LINC01558Q9Y6Z2 57 aa8.28□□□□□ -1.08
CNOT3-201ENST00000221232 ACYP2P14621 99 aa8.27□□□□□ -1.09
CNOT3-201ENST00000221232 KRTAP16-1A8MUX0 517 aa8.26□□□□□ -1.09
CNOT3-201ENST00000221232 SPINK7P58062 85 aa8.26□□□□□ -1.09
CNOT3-201ENST00000221232 C7orf65Q6ZTY9 151 aa8.21□□□□□ -1.1
CNOT3-201ENST00000221232 ATP11AUNQ6ZP68 121 aa8.2□□□□□ -1.1
CNOT3-201ENST00000221232 DMAC1Q96GE9 116 aa8.19□□□□□ -1.1
CNOT3-201ENST00000221232 KRTAP21-3Q3LHN1 58 aa8.18□□□□□ -1.1
CNOT3-201ENST00000221232 FAT1Q14517 4588 aa8.17□□□□□ -1.1
CNOT3-201ENST00000221232 SPINK1P00995 79 aa8.17□□□□□ -1.1
CNOT3-201ENST00000221232 LINC00304Q8N9R0 145 aa8.16□□□□□ -1.1
CNOT3-201ENST00000221232 C9orf92A6NGG3 77 aa8.16□□□□□ -1.1
CNOT3-201ENST00000221232 SACSQ9NZJ4 4579 aa8.15□□□□□ -1.1
CNOT3-201ENST00000221232 CDC42SE1Q9NRR8 79 aa8.14□□□□□ -1.11
CNOT3-201ENST00000221232 Q8N1X5 172 aa8.13□□□□□ -1.11
CNOT3-201ENST00000221232 DYNC1H1Q14204 4646 aaKnown RBP8.12□□□□□ -1.11
CNOT3-201ENST00000221232 A0A1B0GU69 56 aa8.09□□□□□ -1.11
CNOT3-201ENST00000221232 LINC01554Q52M75 96 aa8.07□□□□□ -1.12
CNOT3-201ENST00000221232 A0A1B0GVY2 172 aa7.96□□□□□ -1.13
CNOT3-201ENST00000221232 APOBP04114 4563 aaKnown RBP7.96□□□□□ -1.13
CNOT3-201ENST00000221232 KRTAP10-4P60372 401 aaPredicted RBP7.94□□□□□ -1.14
CNOT3-201ENST00000221232 KMT2CQ8NEZ4 4911 aaKnown RBP7.94□□□□□ -1.14
CNOT3-201ENST00000221232 RPS29P62273 56 aaKnown RBP7.91□□□□□ -1.14
CNOT3-201ENST00000221232 MIR22HGQ0VDD5 57 aa7.9□□□□□ -1.14
CNOT3-201ENST00000221232 UQCR11O14957 56 aa7.89□□□□□ -1.15
CNOT3-201ENST00000221232 LRP1Q07954 4544 aaKnown RBP7.88□□□□□ -1.15
CNOT3-201ENST00000221232 A8MUU9 505 aa7.87□□□□□ -1.15
CNOT3-201ENST00000221232 CSAG1Q6PB30 78 aa7.87□□□□□ -1.15
CNOT3-201ENST00000221232 C20orf166-AS1Q96NR2 134 aa7.86□□□□□ -1.15
CNOT3-201ENST00000221232 DMBT1Q9UGM3 2413 aaPredicted RBP7.85□□□□□ -1.15
CNOT3-201ENST00000221232 SPATA8Q6RVD6 105 aa7.85□□□□□ -1.15
CNOT3-201ENST00000221232 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
CNOT3-201ENST00000221232 RYR2Q92736 4967 aa7.84□□□□□ -1.15
CNOT3-201ENST00000221232 FLG2Q5D862 2391 aaPredicted RBP7.84□□□□□ -1.15
CNOT3-201ENST00000221232 PKHD1L1Q86WI1 4243 aa7.82□□□□□ -1.16
CNOT3-201ENST00000221232 MYCBP2O75592 4640 aa7.76□□□□□ -1.17
CNOT3-201ENST00000221232 Q5VSD8 79 aa7.72□□□□□ -1.17
CNOT3-201ENST00000221232 A0A0A0MQY5 61 aa7.71□□□□□ -1.18
CNOT3-201ENST00000221232 FAT3Q8TDW7 4589 aa7.69□□□□□ -1.18
CNOT3-201ENST00000221232 KRTAP17-1Q9BYP8 105 aa7.67□□□□□ -1.18
CNOT3-201ENST00000221232 HSPG2P98160 4391 aa7.67□□□□□ -1.18
CNOT3-201ENST00000221232 H0YAA0 97 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms