RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 A0A087X002 238 aa10.28□□□□□ -0.76
USB1-201ENST00000219281 NOTCH2NLQ7Z3S9 236 aa10.28□□□□□ -0.76
USB1-201ENST00000219281 PRR15LQ9BU68 103 aa10.28□□□□□ -0.76
USB1-201ENST00000219281 FRAS1Q86XX4 4008 aa10.28□□□□□ -0.76
USB1-201ENST00000219281 DNAH8Q96JB1 4490 aa10.27□□□□□ -0.76
USB1-201ENST00000219281 MRPL34Q9BQ48 92 aaKnown RBP10.27□□□□□ -0.76
USB1-201ENST00000219281 PLAC8Q9NZF1 115 aa10.27□□□□□ -0.77
USB1-201ENST00000219281 CHKB-CPT1BH3BT56 60 aa10.25□□□□□ -0.77
USB1-201ENST00000219281 A8MU10 97 aa10.24□□□□□ -0.77
USB1-201ENST00000219281 DNAH6Q9C0G6 4158 aa10.24□□□□□ -0.77
USB1-201ENST00000219281 LY6G6CO95867 125 aa10.23□□□□□ -0.77
USB1-201ENST00000219281 C1orf134Q5TEV5 83 aa10.23□□□□□ -0.77
USB1-201ENST00000219281 SPINK6Q6UWN8 80 aa10.21□□□□□ -0.77
USB1-201ENST00000219281 HYDINQ4G0P3 5121 aa10.2□□□□□ -0.78
USB1-201ENST00000219281 DNAH11Q96DT5 4516 aa10.19□□□□□ -0.78
USB1-201ENST00000219281 DNAH5Q8TE73 4624 aa10.18□□□□□ -0.78
USB1-201ENST00000219281 KRTAP21-3Q3LHN1 58 aa10.17□□□□□ -0.78
USB1-201ENST00000219281 CIRBP-AS1Q8TBR5 109 aa10.16□□□□□ -0.78
USB1-201ENST00000219281 LOC101927531A0A1B0GV80 90 aa10.16□□□□□ -0.78
USB1-201ENST00000219281 IGLV7-43P04211 117 aa10.16□□□□□ -0.78
USB1-201ENST00000219281 Q75L30 129 aa10.16□□□□□ -0.78
USB1-201ENST00000219281 HRES1P13985 223 aa10.14□□□□□ -0.79
USB1-201ENST00000219281 SPAG11AQ6PDA7 123 aa10.14□□□□□ -0.79
USB1-201ENST00000219281 PMAIP1Q13794 54 aa10.13□□□□□ -0.79
USB1-201ENST00000219281 Q5W150 140 aa10.13□□□□□ -0.79
USB1-201ENST00000219281 ALMS1Q8TCU4 4167 aa10.12□□□□□ -0.79
USB1-201ENST00000219281 FAT2Q9NYQ8 4349 aa10.11□□□□□ -0.79
USB1-201ENST00000219281 A6NED7 52 aa10.1□□□□□ -0.79
USB1-201ENST00000219281 LINC01558Q9Y6Z2 57 aa10.1□□□□□ -0.79
USB1-201ENST00000219281 KRTAP10-2P60368 255 aa10.09□□□□□ -0.79
USB1-201ENST00000219281 LCA10Q71F78 164 aa10.09□□□□□ -0.79
USB1-201ENST00000219281 KRTAP13-3Q3SY46 172 aa10.08□□□□□ -0.8
USB1-201ENST00000219281 PKD1P98161 4303 aa10.07□□□□□ -0.8
USB1-201ENST00000219281 SSBP3-AS1Q7Z2R9 100 aa10.04□□□□□ -0.8
USB1-201ENST00000219281 SPTSSBQ8NFR3 76 aa10.04□□□□□ -0.8
USB1-201ENST00000219281 C8orf87E5RJ46 101 aa10.01□□□□□ -0.81
USB1-201ENST00000219281 LRP1BQ9NZR2 4599 aa10.01□□□□□ -0.81
USB1-201ENST00000219281 PRR26Q8N8Z3 221 aa10□□□□□ -0.81
USB1-201ENST00000219281 ATP11AUNQ6ZP68 121 aa9.98□□□□□ -0.81
USB1-201ENST00000219281 CDC42SE1Q9NRR8 79 aa9.98□□□□□ -0.81
USB1-201ENST00000219281 SACSQ9NZJ4 4579 aa9.97□□□□□ -0.81
USB1-201ENST00000219281 LINC00313P59037 77 aa9.97□□□□□ -0.81
USB1-201ENST00000219281 RETNLBQ9BQ08 111 aa9.96□□□□□ -0.81
USB1-201ENST00000219281 SPINK7P58062 85 aa9.95□□□□□ -0.82
USB1-201ENST00000219281 KRTAP10-1P60331 282 aa9.95□□□□□ -0.82
USB1-201ENST00000219281 ACYP2P14621 99 aa9.94□□□□□ -0.82
USB1-201ENST00000219281 SEC61GP60059 68 aa9.94□□□□□ -0.82
USB1-201ENST00000219281 KRTAP13-2Q52LG2 175 aa9.94□□□□□ -0.82
USB1-201ENST00000219281 Q6ZSA8 131 aa9.93□□□□□ -0.82
USB1-201ENST00000219281 FAM229AH3BQW9 127 aa9.91□□□□□ -0.82
USB1-201ENST00000219281 DMAC1Q96GE9 116 aa9.89□□□□□ -0.83
USB1-201ENST00000219281 VPS13BQ7Z7G8 4022 aa9.87□□□□□ -0.83
USB1-201ENST00000219281 A6NN06 94 aa9.87□□□□□ -0.83
USB1-201ENST00000219281 PKHD1P08F94 4074 aa9.87□□□□□ -0.83
USB1-201ENST00000219281 IGKV2-30P06310 120 aa9.85□□□□□ -0.83
USB1-201ENST00000219281 KTN1-AS1Q86SY8 53 aa9.85□□□□□ -0.83
USB1-201ENST00000219281 KRTAP16-1A8MUX0 517 aa9.83□□□□□ -0.84
USB1-201ENST00000219281 KRTAP1-4P0C5Y4 121 aa9.79□□□□□ -0.84
USB1-201ENST00000219281 IGKV2D-30A0A075B6S6 120 aa9.75□□□□□ -0.85
USB1-201ENST00000219281 DYNC1H1Q14204 4646 aaKnown RBP9.73□□□□□ -0.85
USB1-201ENST00000219281 A0A1B0GU69 56 aa9.72□□□□□ -0.85
USB1-201ENST00000219281 C4orf48Q5BLP8 95 aa9.71□□□□□ -0.86
USB1-201ENST00000219281 PLA2G1BP04054 148 aaKnown RBP9.7□□□□□ -0.86
USB1-201ENST00000219281 C7orf65Q6ZTY9 151 aa9.68□□□□□ -0.86
USB1-201ENST00000219281 TYMSOSQ8TAI1 123 aa9.68□□□□□ -0.86
USB1-201ENST00000219281 RYR2Q92736 4967 aa9.67□□□□□ -0.86
USB1-201ENST00000219281 RBM12B-AS1Q9P1G2 102 aa9.66□□□□□ -0.86
USB1-201ENST00000219281 KMT2CQ8NEZ4 4911 aaKnown RBP9.64□□□□□ -0.87
USB1-201ENST00000219281 SPINK1P00995 79 aa9.63□□□□□ -0.87
USB1-201ENST00000219281 FAT1Q14517 4588 aa9.62□□□□□ -0.87
USB1-201ENST00000219281 APOBP04114 4563 aaKnown RBP9.61□□□□□ -0.87
USB1-201ENST00000219281 A0A1B0GVY2 172 aa9.61□□□□□ -0.87
USB1-201ENST00000219281 SPATA8Q6RVD6 105 aa9.59□□□□□ -0.87
USB1-201ENST00000219281 UQCR11O14957 56 aa9.55□□□□□ -0.88
USB1-201ENST00000219281 SMR3BP02814 79 aaPredicted RBP9.55□□□□□ -0.88
USB1-201ENST00000219281 MIR22HGQ0VDD5 57 aa9.55□□□□□ -0.88
USB1-201ENST00000219281 Q8N1X5 172 aa9.54□□□□□ -0.88
USB1-201ENST00000219281 LINC00304Q8N9R0 145 aa9.53□□□□□ -0.88
USB1-201ENST00000219281 KRTAP10-4P60372 401 aaPredicted RBP9.47□□□□□ -0.89
USB1-201ENST00000219281 RPS29P62273 56 aaKnown RBP9.46□□□□□ -0.9
USB1-201ENST00000219281 PRAC1Q96KF2 57 aa9.46□□□□□ -0.9
USB1-201ENST00000219281 ADM2Q7Z4H4 148 aa9.44□□□□□ -0.9
USB1-201ENST00000219281 PKHD1L1Q86WI1 4243 aa9.43□□□□□ -0.9
USB1-201ENST00000219281 C9orf92A6NGG3 77 aa9.42□□□□□ -0.9
USB1-201ENST00000219281 RYR3Q15413 4870 aa9.37□□□□□ -0.91
USB1-201ENST00000219281 A8MUU9 505 aa9.35□□□□□ -0.91
USB1-201ENST00000219281 C20orf166-AS1Q96NR2 134 aa9.34□□□□□ -0.91
USB1-201ENST00000219281 HSPG2P98160 4391 aa9.3□□□□□ -0.92
USB1-201ENST00000219281 KRTAP3-1Q9BYR8 98 aa9.29□□□□□ -0.92
USB1-201ENST00000219281 LRP1Q07954 4544 aaKnown RBP9.23□□□□□ -0.93
USB1-201ENST00000219281 H0YAA0 97 aa9.22□□□□□ -0.93
USB1-201ENST00000219281 TNXBP22105 4242 aa9.2□□□□□ -0.94
USB1-201ENST00000219281 RYR1P21817 5038 aa9.19□□□□□ -0.94
USB1-201ENST00000219281 A0A1B0GU33 70 aa9.17□□□□□ -0.94
USB1-201ENST00000219281 CSAG1Q6PB30 78 aa9.16□□□□□ -0.94
USB1-201ENST00000219281 LINC01554Q52M75 96 aa9.15□□□□□ -0.95
USB1-201ENST00000219281 KRTAP17-1Q9BYP8 105 aa9.14□□□□□ -0.95
USB1-201ENST00000219281 FLG2Q5D862 2391 aaPredicted RBP9.13□□□□□ -0.95
USB1-201ENST00000219281 H1FX-AS1Q4G0G2 97 aa9.13□□□□□ -0.95
USB1-201ENST00000219281 FAT3Q8TDW7 4589 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms