RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 CDC42SE1Q9NRR8 79 aa6.8□□□□□ -1.32
ACTN1-201ENST00000193403 PSORS1C2Q9UIG4 136 aa6.8□□□□□ -1.32
ACTN1-201ENST00000193403 A0A087X002 238 aa6.79□□□□□ -1.32
ACTN1-201ENST00000193403 NOTCH2NLQ7Z3S9 236 aa6.79□□□□□ -1.32
ACTN1-201ENST00000193403 FBN3Q75N90 2809 aa6.78□□□□□ -1.32
ACTN1-201ENST00000193403 MEGF8Q7Z7M0 2845 aa6.78□□□□□ -1.32
ACTN1-201ENST00000193403 PRAC1Q96KF2 57 aa6.77□□□□□ -1.33
ACTN1-201ENST00000193403 APLNQ9ULZ1 77 aa6.77□□□□□ -1.33
ACTN1-201ENST00000193403 SPRR1BP22528 89 aa6.76□□□□□ -1.33
ACTN1-201ENST00000193403 A0A1B0GU69 56 aa6.75□□□□□ -1.33
ACTN1-201ENST00000193403 C7orf65Q6ZTY9 151 aa6.75□□□□□ -1.33
ACTN1-201ENST00000193403 ACYP2P14621 99 aa6.74□□□□□ -1.33
ACTN1-201ENST00000193403 A0A087WTM6 91 aa6.74□□□□□ -1.33
ACTN1-201ENST00000193403 LINC01558Q9Y6Z2 57 aa6.74□□□□□ -1.33
ACTN1-201ENST00000193403 ZNF861PO60384 105 aa6.69□□□□□ -1.34
ACTN1-201ENST00000193403 Q5W150 140 aa6.69□□□□□ -1.34
ACTN1-201ENST00000193403 LINC00313P59037 77 aa6.69□□□□□ -1.34
ACTN1-201ENST00000193403 Q96NJ1 140 aa6.68□□□□□ -1.34
ACTN1-201ENST00000193403 WWC2-AS2Q96NR7 200 aa6.67□□□□□ -1.34
ACTN1-201ENST00000193403 A6NN06 94 aa6.67□□□□□ -1.34
ACTN1-201ENST00000193403 SMR3BP02814 79 aaPredicted RBP6.67□□□□□ -1.34
ACTN1-201ENST00000193403 FLG2Q5D862 2391 aaPredicted RBP6.66□□□□□ -1.34
ACTN1-201ENST00000193403 Q6ZR54 194 aa6.65□□□□□ -1.34
ACTN1-201ENST00000193403 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
ACTN1-201ENST00000193403 PLA2G1BP04054 148 aaKnown RBP6.62□□□□□ -1.35
ACTN1-201ENST00000193403 FAM229AH3BQW9 127 aa6.61□□□□□ -1.35
ACTN1-201ENST00000193403 IGLV7-43P04211 117 aa6.61□□□□□ -1.35
ACTN1-201ENST00000193403 MIR22HGQ0VDD5 57 aa6.61□□□□□ -1.35
ACTN1-201ENST00000193403 Q8N1X5 172 aa6.61□□□□□ -1.35
ACTN1-201ENST00000193403 C9orf92A6NGG3 77 aa6.6□□□□□ -1.35
ACTN1-201ENST00000193403 KRTAP13-1Q8IUC0 172 aa6.6□□□□□ -1.35
ACTN1-201ENST00000193403 C8orf87E5RJ46 101 aa6.6□□□□□ -1.35
ACTN1-201ENST00000193403 TYMSOSQ8TAI1 123 aa6.6□□□□□ -1.35
ACTN1-201ENST00000193403 UQCR11O14957 56 aa6.58□□□□□ -1.36
ACTN1-201ENST00000193403 PRKDCP78527 4128 aaKnown RBP6.58□□□□□ -1.36
ACTN1-201ENST00000193403 HUWE1Q7Z6Z7 4374 aaKnown RBP6.57□□□□□ -1.36
ACTN1-201ENST00000193403 LYSTQ99698 3801 aa6.56□□□□□ -1.36
ACTN1-201ENST00000193403 LINC00483Q53H64 154 aa6.55□□□□□ -1.36
ACTN1-201ENST00000193403 DNAH10Q8IVF4 4471 aa6.53□□□□□ -1.36
ACTN1-201ENST00000193403 Q6ZRN7 208 aaPredicted RBP6.53□□□□□ -1.36
ACTN1-201ENST00000193403 CMYA5Q8N3K9 4069 aa6.51□□□□□ -1.37
ACTN1-201ENST00000193403 KRTAP10-2P60368 255 aa6.51□□□□□ -1.37
ACTN1-201ENST00000193403 SSBP3-AS1Q7Z2R9 100 aa6.51□□□□□ -1.37
ACTN1-201ENST00000193403 ASB16-AS1Q495Z4 193 aa6.5□□□□□ -1.37
ACTN1-201ENST00000193403 DMAC1Q96GE9 116 aa6.49□□□□□ -1.37
ACTN1-201ENST00000193403 PLAC8Q9NZF1 115 aa6.49□□□□□ -1.37
ACTN1-201ENST00000193403 DNAH9Q9NYC9 4486 aa6.48□□□□□ -1.37
ACTN1-201ENST00000193403 LINC01554Q52M75 96 aa6.47□□□□□ -1.37
ACTN1-201ENST00000193403 CSAG1Q6PB30 78 aa6.47□□□□□ -1.37
ACTN1-201ENST00000193403 PLECQ15149 4684 aaKnown RBP6.43□□□□□ -1.38
ACTN1-201ENST00000193403 K7ERS5 55 aa6.4□□□□□ -1.38
ACTN1-201ENST00000193403 KRTAP10-1P60331 282 aa6.4□□□□□ -1.38
ACTN1-201ENST00000193403 LINC00304Q8N9R0 145 aa6.4□□□□□ -1.38
ACTN1-201ENST00000193403 CRIPTQ9P021 101 aa6.39□□□□□ -1.39
ACTN1-201ENST00000193403 SPATA8Q6RVD6 105 aa6.39□□□□□ -1.39
ACTN1-201ENST00000193403 STARD9Q9P2P6 4700 aa6.38□□□□□ -1.39
ACTN1-201ENST00000193403 KRTAP13-2Q52LG2 175 aa6.36□□□□□ -1.39
ACTN1-201ENST00000193403 H3BS24 57 aa6.35□□□□□ -1.39
ACTN1-201ENST00000193403 KRTAP13-3Q3SY46 172 aa6.35□□□□□ -1.39
ACTN1-201ENST00000193403 A0A0D9SG42 100 aa6.34□□□□□ -1.39
ACTN1-201ENST00000193403 DNAH7Q8WXX0 4024 aa6.34□□□□□ -1.39
ACTN1-201ENST00000193403 KMT2AQ03164 3969 aa6.34□□□□□ -1.39
ACTN1-201ENST00000193403 A0A1B0GU33 70 aa6.27□□□□□ -1.41
ACTN1-201ENST00000193403 KRTAP21-3Q3LHN1 58 aa6.26□□□□□ -1.41
ACTN1-201ENST00000193403 DNAH3Q8TD57 4116 aa6.25□□□□□ -1.41
ACTN1-201ENST00000193403 KRTAP16-1A8MUX0 517 aa6.21□□□□□ -1.41
ACTN1-201ENST00000193403 Q6ZSA8 131 aa6.17□□□□□ -1.42
ACTN1-201ENST00000193403 LCE2BO14633 110 aa6.17□□□□□ -1.42
ACTN1-201ENST00000193403 FRAS1Q86XX4 4008 aa6.16□□□□□ -1.42
ACTN1-201ENST00000193403 DNAH1Q9P2D7 4330 aa6.15□□□□□ -1.42
ACTN1-201ENST00000193403 HYDINQ4G0P3 5121 aa6.15□□□□□ -1.42
ACTN1-201ENST00000193403 H0YAA0 97 aa6.15□□□□□ -1.42
ACTN1-201ENST00000193403 KRTAP1-4P0C5Y4 121 aa6.15□□□□□ -1.42
ACTN1-201ENST00000193403 SPINT4Q6UDR6 99 aa6.15□□□□□ -1.42
ACTN1-201ENST00000193403 DNAH11Q96DT5 4516 aa6.15□□□□□ -1.43
ACTN1-201ENST00000193403 VPS13DQ5THJ4 4388 aa6.14□□□□□ -1.43
ACTN1-201ENST00000193403 H1FX-AS1Q4G0G2 97 aa6.13□□□□□ -1.43
ACTN1-201ENST00000193403 DNAH8Q96JB1 4490 aa6.11□□□□□ -1.43
ACTN1-201ENST00000193403 KMT2CQ8NEZ4 4911 aaKnown RBP6.11□□□□□ -1.43
ACTN1-201ENST00000193403 KRTAP25-1Q3LHN0 102 aa6.11□□□□□ -1.43
ACTN1-201ENST00000193403 A8MUU9 505 aa6.07□□□□□ -1.44
ACTN1-201ENST00000193403 DNAH2Q9P225 4427 aa6.06□□□□□ -1.44
ACTN1-201ENST00000193403 DNAH6Q9C0G6 4158 aa6.05□□□□□ -1.44
ACTN1-201ENST00000193403 FAT1Q14517 4588 aa6.04□□□□□ -1.44
ACTN1-201ENST00000193403 COX6B2Q6YFQ2 88 aa6.03□□□□□ -1.44
ACTN1-201ENST00000193403 ROMO1P60602 79 aa6.02□□□□□ -1.45
ACTN1-201ENST00000193403 J3QL48 77 aa6.01□□□□□ -1.45
ACTN1-201ENST00000193403 DNAH17Q9UFH2 4485 aa6□□□□□ -1.45
ACTN1-201ENST00000193403 PKHD1P08F94 4074 aa6□□□□□ -1.45
ACTN1-201ENST00000193403 DNAH5Q8TE73 4624 aa5.99□□□□□ -1.45
ACTN1-201ENST00000193403 SACSQ9NZJ4 4579 aa5.98□□□□□ -1.45
ACTN1-201ENST00000193403 RPL37P61927 97 aaKnown RBP5.97□□□□□ -1.45
ACTN1-201ENST00000193403 KRTAP3-1Q9BYR8 98 aa5.95□□□□□ -1.46
ACTN1-201ENST00000193403 Q5VSD8 79 aa5.95□□□□□ -1.46
ACTN1-201ENST00000193403 DYNC2H1Q8NCM8 4307 aaKnown RBP5.94□□□□□ -1.46
ACTN1-201ENST00000193403 LRP1BQ9NZR2 4599 aa5.94□□□□□ -1.46
ACTN1-201ENST00000193403 C10orf95Q9H7T3 257 aa5.94□□□□□ -1.46
ACTN1-201ENST00000193403 C20orf166-AS1Q96NR2 134 aa5.93□□□□□ -1.46
ACTN1-201ENST00000193403 S4R3F8 94 aa5.9□□□□□ -1.46
ACTN1-201ENST00000193403 KIAA1109Q2LD37 5005 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms