RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 CYP4F30PQ9H0H9 118 aa7.79□□□□□ -1.16
HDAC7-201ENST00000080059 IGLV7-46A0A075B6I9 117 aa7.78□□□□□ -1.16
HDAC7-201ENST00000080059 A0A087X002 238 aa7.77□□□□□ -1.17
HDAC7-201ENST00000080059 OXTP01178 125 aa7.76□□□□□ -1.17
HDAC7-201ENST00000080059 HRES1P13985 223 aa7.75□□□□□ -1.17
HDAC7-201ENST00000080059 FP248Q71RG6 208 aaPredicted RBP7.75□□□□□ -1.17
HDAC7-201ENST00000080059 VPS13CQ709C8 3753 aa7.75□□□□□ -1.17
HDAC7-201ENST00000080059 KRTAP29-1A8MX34 341 aaPredicted RBP7.74□□□□□ -1.17
HDAC7-201ENST00000080059 LCE6AA0A183 80 aa7.73□□□□□ -1.17
HDAC7-201ENST00000080059 Q5XG85 94 aa7.72□□□□□ -1.17
HDAC7-201ENST00000080059 J3QL48 77 aa7.71□□□□□ -1.18
HDAC7-201ENST00000080059 NOTCH2NLQ7Z3S9 236 aa7.71□□□□□ -1.18
HDAC7-201ENST00000080059 UQCR11O14957 56 aa7.71□□□□□ -1.18
HDAC7-201ENST00000080059 KRTAP13-1Q8IUC0 172 aa7.7□□□□□ -1.18
HDAC7-201ENST00000080059 Q5W150 140 aa7.68□□□□□ -1.18
HDAC7-201ENST00000080059 Q1T7F1 81 aa7.68□□□□□ -1.18
HDAC7-201ENST00000080059 ANK3Q12955 4377 aaKnown RBP7.65□□□□□ -1.18
HDAC7-201ENST00000080059 ZCCHC13Q8WW36 166 aaKnown RBP7.63□□□□□ -1.19
HDAC7-201ENST00000080059 MIR22HGQ0VDD5 57 aa7.62□□□□□ -1.19
HDAC7-201ENST00000080059 ZNF469Q96JG9 3925 aaPredicted RBP7.6□□□□□ -1.19
HDAC7-201ENST00000080059 KRTAP13-2Q52LG2 175 aa7.57□□□□□ -1.2
HDAC7-201ENST00000080059 Q5VSD8 79 aa7.57□□□□□ -1.2
HDAC7-201ENST00000080059 SRRM2Q9UQ35 2752 aaKnown RBP7.57□□□□□ -1.2
HDAC7-201ENST00000080059 SPINK7P58062 85 aa7.55□□□□□ -1.2
HDAC7-201ENST00000080059 CDC42SE1Q9NRR8 79 aa7.53□□□□□ -1.2
HDAC7-201ENST00000080059 FBN3Q75N90 2809 aa7.53□□□□□ -1.2
HDAC7-201ENST00000080059 LINC01558Q9Y6Z2 57 aa7.53□□□□□ -1.2
HDAC7-201ENST00000080059 Q5VV11 94 aa7.52□□□□□ -1.21
HDAC7-201ENST00000080059 COX6B2Q6YFQ2 88 aa7.5□□□□□ -1.21
HDAC7-201ENST00000080059 Q75L30 129 aa7.49□□□□□ -1.21
HDAC7-201ENST00000080059 RBM12B-AS1Q9P1G2 102 aa7.48□□□□□ -1.21
HDAC7-201ENST00000080059 Q6ZSA8 131 aa7.48□□□□□ -1.21
HDAC7-201ENST00000080059 ASB16-AS1Q495Z4 193 aa7.48□□□□□ -1.21
HDAC7-201ENST00000080059 KRTAP21-3Q3LHN1 58 aa7.47□□□□□ -1.21
HDAC7-201ENST00000080059 DMAC1Q96GE9 116 aa7.45□□□□□ -1.22
HDAC7-201ENST00000080059 A0A0D9SG42 100 aa7.45□□□□□ -1.22
HDAC7-201ENST00000080059 A0A1B0GU33 70 aa7.41□□□□□ -1.22
HDAC7-201ENST00000080059 KTN1-AS1Q86SY8 53 aa7.39□□□□□ -1.23
HDAC7-201ENST00000080059 LINC01554Q52M75 96 aa7.39□□□□□ -1.23
HDAC7-201ENST00000080059 COL7A1Q02388 2944 aa7.37□□□□□ -1.23
HDAC7-201ENST00000080059 MEGF8Q7Z7M0 2845 aa7.36□□□□□ -1.23
HDAC7-201ENST00000080059 KRTAP1-4P0C5Y4 121 aa7.35□□□□□ -1.23
HDAC7-201ENST00000080059 SPINT4Q6UDR6 99 aa7.34□□□□□ -1.23
HDAC7-201ENST00000080059 RPS29P62273 56 aaKnown RBP7.32□□□□□ -1.24
HDAC7-201ENST00000080059 S4R3F8 94 aa7.27□□□□□ -1.24
HDAC7-201ENST00000080059 CSAG1Q6PB30 78 aa7.27□□□□□ -1.25
HDAC7-201ENST00000080059 LCA10Q71F78 164 aa7.26□□□□□ -1.25
HDAC7-201ENST00000080059 A8MU10 97 aa7.22□□□□□ -1.25
HDAC7-201ENST00000080059 CRIPTQ9P021 101 aa7.22□□□□□ -1.25
HDAC7-201ENST00000080059 PRAC1Q96KF2 57 aa7.21□□□□□ -1.25
HDAC7-201ENST00000080059 SEC61BP60468 96 aaKnown RBP7.19□□□□□ -1.26
HDAC7-201ENST00000080059 CSMD3Q7Z407 3707 aa7.16□□□□□ -1.26
HDAC7-201ENST00000080059 SPATA8Q6RVD6 105 aa7.16□□□□□ -1.26
HDAC7-201ENST00000080059 AKAP9Q99996 3911 aa7.15□□□□□ -1.27
HDAC7-201ENST00000080059 A8MUU9 505 aa7.14□□□□□ -1.27
HDAC7-201ENST00000080059 H1FX-AS1Q4G0G2 97 aa7.12□□□□□ -1.27
HDAC7-201ENST00000080059 C20orf166-AS1Q96NR2 134 aa7.12□□□□□ -1.27
HDAC7-201ENST00000080059 RPL37P61927 97 aaKnown RBP7.1□□□□□ -1.27
HDAC7-201ENST00000080059 R4GN34 69 aa7.09□□□□□ -1.27
HDAC7-201ENST00000080059 KRTAP16-1A8MUX0 517 aa7.09□□□□□ -1.27
HDAC7-201ENST00000080059 M0R2T5 61 aa7.08□□□□□ -1.28
HDAC7-201ENST00000080059 CAMK2N1Q7Z7J9 78 aa7.05□□□□□ -1.28
HDAC7-201ENST00000080059 ADM2Q7Z4H4 148 aa7.04□□□□□ -1.28
HDAC7-201ENST00000080059 HUWE1Q7Z6Z7 4374 aaKnown RBP7.03□□□□□ -1.28
HDAC7-201ENST00000080059 A0A1B0GVY2 172 aa7.01□□□□□ -1.29
HDAC7-201ENST00000080059 M0QZ58 72 aa7□□□□□ -1.29
HDAC7-201ENST00000080059 XP32Q5T750 250 aa6.98□□□□□ -1.29
HDAC7-201ENST00000080059 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
HDAC7-201ENST00000080059 A6NN06 94 aa6.96□□□□□ -1.29
HDAC7-201ENST00000080059 ROMO1P60602 79 aa6.9□□□□□ -1.31
HDAC7-201ENST00000080059 KRTAP10-8P60410 259 aa6.88□□□□□ -1.31
HDAC7-201ENST00000080059 DNAH9Q9NYC9 4486 aa6.82□□□□□ -1.32
HDAC7-201ENST00000080059 H3BS24 57 aa6.81□□□□□ -1.32
HDAC7-201ENST00000080059 TPRXLQ17RH7 258 aa6.79□□□□□ -1.32
HDAC7-201ENST00000080059 DNHD1Q96M86 4753 aa6.77□□□□□ -1.33
HDAC7-201ENST00000080059 H0YAA0 97 aa6.75□□□□□ -1.33
HDAC7-201ENST00000080059 PLECQ15149 4684 aaKnown RBP6.73□□□□□ -1.33
HDAC7-201ENST00000080059 DNAH10Q8IVF4 4471 aa6.68□□□□□ -1.34
HDAC7-201ENST00000080059 KRTAP25-1Q3LHN0 102 aa6.68□□□□□ -1.34
HDAC7-201ENST00000080059 P0C880 135 aa6.67□□□□□ -1.34
HDAC7-201ENST00000080059 KRTAP3-1Q9BYR8 98 aa6.65□□□□□ -1.35
HDAC7-201ENST00000080059 LUZP6Q538Z0 58 aa6.63□□□□□ -1.35
HDAC7-201ENST00000080059 DNAH11Q96DT5 4516 aa6.62□□□□□ -1.35
HDAC7-201ENST00000080059 DNAH1Q9P2D7 4330 aa6.6□□□□□ -1.35
HDAC7-201ENST00000080059 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
HDAC7-201ENST00000080059 KRTAP10-4P60372 401 aaPredicted RBP6.59□□□□□ -1.36
HDAC7-201ENST00000080059 STARD9Q9P2P6 4700 aa6.55□□□□□ -1.36
HDAC7-201ENST00000080059 PRKDCP78527 4128 aaKnown RBP6.55□□□□□ -1.36
HDAC7-201ENST00000080059 DNAH5Q8TE73 4624 aa6.54□□□□□ -1.36
HDAC7-201ENST00000080059 C10orf95Q9H7T3 257 aa6.52□□□□□ -1.37
HDAC7-201ENST00000080059 MT1HL1P0DM35 61 aa6.52□□□□□ -1.37
HDAC7-201ENST00000080059 ANK2Q01484 3957 aa6.51□□□□□ -1.37
HDAC7-201ENST00000080059 VPS13DQ5THJ4 4388 aa6.48□□□□□ -1.37
HDAC7-201ENST00000080059 FAT1Q14517 4588 aa6.45□□□□□ -1.38
HDAC7-201ENST00000080059 KRTAP4-5Q9BYR2 181 aa6.42□□□□□ -1.38
HDAC7-201ENST00000080059 KMT2AQ03164 3969 aa6.4□□□□□ -1.38
HDAC7-201ENST00000080059 LRP1BQ9NZR2 4599 aa6.38□□□□□ -1.39
HDAC7-201ENST00000080059 DNAH17Q9UFH2 4485 aa6.38□□□□□ -1.39
HDAC7-201ENST00000080059 TNP1P09430 55 aa6.38□□□□□ -1.39
HDAC7-201ENST00000080059 KRTAP10-6P60371 365 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms